# Assembly name: ASM37820v1 # Organism name: Sediminispirochaeta bajacaliforniensis DSM 16054 (spirochetes) # Infraspecific name: strain=DSM 16054 # Taxid: 1123274 # BioSample: SAMN02441006 # BioProject: PRJNA181375 # Submitter: DOE Joint Genome Institute # Date: 2013-04-23 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: ARJU01 # Assembly method: Velvet v. 1.1.04; ALLPATHS v. R37654 # Genome coverage: Unknown # Sequencing technology: Illumina HiSeq 2000 # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_000378205.1 # RefSeq assembly accession: GCF_000378205.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_000378215.1 GCF_000378215.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name F459DRAFT_scaffold00001.1 unplaced-scaffold na na KB899406.1 = NZ_KB899406.1 Primary Assembly 375186 na F459DRAFT_scaffold00002.2 unplaced-scaffold na na KB899407.1 = NZ_KB899407.1 Primary Assembly 303294 na F459DRAFT_scaffold00003.3 unplaced-scaffold na na KB899408.1 = NZ_KB899408.1 Primary Assembly 249796 na F459DRAFT_scaffold00004.4 unplaced-scaffold na na KB899409.1 = NZ_KB899409.1 Primary Assembly 247948 na F459DRAFT_scaffold00005.5 unplaced-scaffold na na KB899410.1 = NZ_KB899410.1 Primary Assembly 230157 na F459DRAFT_scaffold00006.6 unplaced-scaffold na na KB899411.1 = NZ_KB899411.1 Primary Assembly 228215 na F459DRAFT_scaffold00007.7 unplaced-scaffold na na KB899412.1 = NZ_KB899412.1 Primary Assembly 190244 na F459DRAFT_scaffold00008.8 unplaced-scaffold na na KB899413.1 = NZ_KB899413.1 Primary Assembly 186186 na F459DRAFT_scaffold00009.9 unplaced-scaffold na na KB899414.1 = NZ_KB899414.1 Primary Assembly 180292 na F459DRAFT_scaffold00010.10 unplaced-scaffold na na KB899415.1 = NZ_KB899415.1 Primary Assembly 176769 na F459DRAFT_scaffold00011.11 unplaced-scaffold na na KB899416.1 = NZ_KB899416.1 Primary Assembly 169491 na F459DRAFT_scaffold00012.12 unplaced-scaffold na na KB899417.1 = NZ_KB899417.1 Primary Assembly 166221 na F459DRAFT_scaffold00013.13 unplaced-scaffold na na KB899418.1 = NZ_KB899418.1 Primary Assembly 165110 na F459DRAFT_scaffold00014.14 unplaced-scaffold na na KB899419.1 = NZ_KB899419.1 Primary Assembly 158909 na F459DRAFT_scaffold00015.15 unplaced-scaffold na na KB899420.1 = NZ_KB899420.1 Primary Assembly 132353 na F459DRAFT_scaffold00016.16 unplaced-scaffold na na KB899421.1 = NZ_KB899421.1 Primary Assembly 116919 na F459DRAFT_scaffold00017.17 unplaced-scaffold na na KB899422.1 = NZ_KB899422.1 Primary Assembly 116470 na F459DRAFT_scaffold00018.18 unplaced-scaffold na na KB899423.1 = NZ_KB899423.1 Primary Assembly 100038 na F459DRAFT_scaffold00019.19 unplaced-scaffold na na KB899424.1 = NZ_KB899424.1 Primary Assembly 84695 na F459DRAFT_scaffold00020.20 unplaced-scaffold na na KB899425.1 = NZ_KB899425.1 Primary Assembly 80864 na F459DRAFT_scaffold00021.21 unplaced-scaffold na na KB899426.1 = NZ_KB899426.1 Primary Assembly 77384 na F459DRAFT_scaffold00022.22 unplaced-scaffold na na KB899427.1 = NZ_KB899427.1 Primary Assembly 72447 na F459DRAFT_scaffold00023.23 unplaced-scaffold na na KB899428.1 = NZ_KB899428.1 Primary Assembly 68871 na F459DRAFT_scaffold00024.24 unplaced-scaffold na na KB899429.1 = NZ_KB899429.1 Primary Assembly 62372 na F459DRAFT_scaffold00025.25 unplaced-scaffold na na KB899430.1 = NZ_KB899430.1 Primary Assembly 54924 na F459DRAFT_scaffold00026.26 unplaced-scaffold na na KB899431.1 = NZ_KB899431.1 Primary Assembly 54251 na F459DRAFT_scaffold00027.27 unplaced-scaffold na na KB899432.1 = NZ_KB899432.1 Primary Assembly 46229 na F459DRAFT_scaffold00028.28 unplaced-scaffold na na KB899433.1 = NZ_KB899433.1 Primary Assembly 44263 na F459DRAFT_scaffold00029.29 unplaced-scaffold na na KB899434.1 = NZ_KB899434.1 Primary Assembly 42671 na F459DRAFT_scaffold00030.30 unplaced-scaffold na na KB899435.1 = NZ_KB899435.1 Primary Assembly 35650 na F459DRAFT_scaffold00031.31 unplaced-scaffold na na KB899436.1 = NZ_KB899436.1 Primary Assembly 33381 na F459DRAFT_scaffold00032.32 unplaced-scaffold na na KB899437.1 = NZ_KB899437.1 Primary Assembly 30395 na F459DRAFT_scaffold00033.33 unplaced-scaffold na na KB899438.1 = NZ_KB899438.1 Primary Assembly 24097 na F459DRAFT_scaffold00034.34 unplaced-scaffold na na KB899439.1 = NZ_KB899439.1 Primary Assembly 23945 na F459DRAFT_scaffold00035.35 unplaced-scaffold na na KB899440.1 = NZ_KB899440.1 Primary Assembly 22403 na F459DRAFT_scaffold00036.36 unplaced-scaffold na na KB899441.1 = NZ_KB899441.1 Primary Assembly 22006 na F459DRAFT_scaffold00037.37 unplaced-scaffold na na KB899442.1 = NZ_KB899442.1 Primary Assembly 19357 na F459DRAFT_scaffold00038.38 unplaced-scaffold na na KB899443.1 = NZ_KB899443.1 Primary Assembly 15129 na F459DRAFT_scaffold00039.39 unplaced-scaffold na na KB899444.1 = NZ_KB899444.1 Primary Assembly 14646 na F459DRAFT_scaffold00040.40 unplaced-scaffold na na KB899445.1 = NZ_KB899445.1 Primary Assembly 11085 na F459DRAFT_scaffold00041.41 unplaced-scaffold na na KB899446.1 = NZ_KB899446.1 Primary Assembly 11032 na F459DRAFT_scaffold00042.42 unplaced-scaffold na na KB899447.1 = NZ_KB899447.1 Primary Assembly 10584 na F459DRAFT_scaffold00043.43 unplaced-scaffold na na KB899448.1 = NZ_KB899448.1 Primary Assembly 9394 na F459DRAFT_scaffold00044.44 unplaced-scaffold na na KB899449.1 = NZ_KB899449.1 Primary Assembly 8112 na F459DRAFT_scaffold00045.45 unplaced-scaffold na na KB899450.1 = NZ_KB899450.1 Primary Assembly 7976 na F459DRAFT_scaffold00046.46 unplaced-scaffold na na KB899451.1 = NZ_KB899451.1 Primary Assembly 7893 na F459DRAFT_scaffold00047.47 unplaced-scaffold na na KB899452.1 = NZ_KB899452.1 Primary Assembly 7244 na F459DRAFT_scaffold00048.48 unplaced-scaffold na na KB899453.1 = NZ_KB899453.1 Primary Assembly 7126 na F459DRAFT_scaffold00049.49 unplaced-scaffold na na KB899454.1 = NZ_KB899454.1 Primary Assembly 5730 na F459DRAFT_scaffold00050.50 unplaced-scaffold na na KB899455.1 = NZ_KB899455.1 Primary Assembly 5225 na F459DRAFT_scaffold00051.51 unplaced-scaffold na na KB899456.1 = NZ_KB899456.1 Primary Assembly 5216 na F459DRAFT_scaffold00052.52 unplaced-scaffold na na KB899457.1 = NZ_KB899457.1 Primary Assembly 4685 na F459DRAFT_scaffold00053.53 unplaced-scaffold na na KB899458.1 = NZ_KB899458.1 Primary Assembly 3975 na F459DRAFT_scaffold00054.54 unplaced-scaffold na na KB899459.1 = NZ_KB899459.1 Primary Assembly 3746 na F459DRAFT_scaffold00055.55 unplaced-scaffold na na KB899460.1 = NZ_KB899460.1 Primary Assembly 3230 na F459DRAFT_scaffold00056.56 unplaced-scaffold na na KB899461.1 = NZ_KB899461.1 Primary Assembly 3203 na F459DRAFT_scaffold00057.57 unplaced-scaffold na na KB899462.1 = NZ_KB899462.1 Primary Assembly 3120 na F459DRAFT_scaffold00058.58 unplaced-scaffold na na KB899463.1 = NZ_KB899463.1 Primary Assembly 3020 na F459DRAFT_scaffold00059.59 unplaced-scaffold na na KB899464.1 = NZ_KB899464.1 Primary Assembly 2988 na F459DRAFT_scaffold00060.60 unplaced-scaffold na na KB899465.1 = NZ_KB899465.1 Primary Assembly 2765 na F459DRAFT_scaffold00061.61 unplaced-scaffold na na KB899466.1 = NZ_KB899466.1 Primary Assembly 2754 na F459DRAFT_scaffold00062.62 unplaced-scaffold na na KB899467.1 = NZ_KB899467.1 Primary Assembly 2594 na F459DRAFT_scaffold00063.63 unplaced-scaffold na na KB899468.1 = NZ_KB899468.1 Primary Assembly 2370 na F459DRAFT_scaffold00064.64 unplaced-scaffold na na KB899469.1 = NZ_KB899469.1 Primary Assembly 2342 na F459DRAFT_scaffold00065.65 unplaced-scaffold na na KB899470.1 = NZ_KB899470.1 Primary Assembly 1982 na F459DRAFT_scaffold00066.66 unplaced-scaffold na na KB899471.1 = NZ_KB899471.1 Primary Assembly 1580 na F459DRAFT_scaffold00067.67 unplaced-scaffold na na KB899472.1 = NZ_KB899472.1 Primary Assembly 1567 na F459DRAFT_scaffold00068.68 unplaced-scaffold na na KB899473.1 = NZ_KB899473.1 Primary Assembly 1564 na F459DRAFT_scaffold00069.69 unplaced-scaffold na na KB899474.1 = NZ_KB899474.1 Primary Assembly 1382 na F459DRAFT_scaffold00070.70 unplaced-scaffold na na KB899475.1 = NZ_KB899475.1 Primary Assembly 1382 na F459DRAFT_scaffold00071.71 unplaced-scaffold na na KB899476.1 = NZ_KB899476.1 Primary Assembly 1378 na F459DRAFT_scaffold00072.72 unplaced-scaffold na na KB899477.1 = NZ_KB899477.1 Primary Assembly 1285 na F459DRAFT_scaffold00073.73 unplaced-scaffold na na KB899478.1 = NZ_KB899478.1 Primary Assembly 1279 na F459DRAFT_scaffold00074.74 unplaced-scaffold na na KB899479.1 = NZ_KB899479.1 Primary Assembly 1125 na F459DRAFT_scaffold00075.75 unplaced-scaffold na na KB899480.1 = NZ_KB899480.1 Primary Assembly 1096 na