# Assembly name: ASM38112v1 # Organism name: Caldimonas manganoxidans ATCC BAA-369 (b-proteobacteria) # Infraspecific name: strain=ATCC BAA-369 # Taxid: 1265502 # BioSample: SAMN02440480 # BioProject: PRJNA182454 # Submitter: DOE Joint Genome Institute # Date: 2013-04-24 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: ARLH01 # Assembly method: Velvet v. 1.1.04; ALLPATHS v. r41043 # Genome coverage: Unknown # Sequencing technology: Illumina HiSeq 2000 # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_000381125.1 # RefSeq assembly accession: GCF_000381125.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_000381135.1 GCF_000381135.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name F615DRAFT_scaffold00001.1 unplaced-scaffold na na KB905929.1 = NZ_KB905929.1 Primary Assembly 217125 na F615DRAFT_scaffold00002.2 unplaced-scaffold na na KB905930.1 = NZ_KB905930.1 Primary Assembly 213446 na F615DRAFT_scaffold00003.3 unplaced-scaffold na na KB905931.1 = NZ_KB905931.1 Primary Assembly 197897 na F615DRAFT_scaffold00004.4 unplaced-scaffold na na KB905932.1 = NZ_KB905932.1 Primary Assembly 197480 na F615DRAFT_scaffold00005.5 unplaced-scaffold na na KB905933.1 = NZ_KB905933.1 Primary Assembly 187434 na F615DRAFT_scaffold00006.6 unplaced-scaffold na na KB905934.1 = NZ_KB905934.1 Primary Assembly 168152 na F615DRAFT_scaffold00007.7 unplaced-scaffold na na KB905935.1 = NZ_KB905935.1 Primary Assembly 143880 na F615DRAFT_scaffold00008.8 unplaced-scaffold na na KB905936.1 = NZ_KB905936.1 Primary Assembly 110802 na F615DRAFT_scaffold00009.9 unplaced-scaffold na na KB905937.1 = NZ_KB905937.1 Primary Assembly 105562 na F615DRAFT_scaffold00010.10 unplaced-scaffold na na KB905938.1 = NZ_KB905938.1 Primary Assembly 105462 na F615DRAFT_scaffold00011.11 unplaced-scaffold na na KB905939.1 = NZ_KB905939.1 Primary Assembly 93299 na F615DRAFT_scaffold00012.12 unplaced-scaffold na na KB905940.1 = NZ_KB905940.1 Primary Assembly 92346 na F615DRAFT_scaffold00013.13 unplaced-scaffold na na KB905941.1 = NZ_KB905941.1 Primary Assembly 87245 na F615DRAFT_scaffold00014.14 unplaced-scaffold na na KB905942.1 = NZ_KB905942.1 Primary Assembly 84152 na F615DRAFT_scaffold00015.15 unplaced-scaffold na na KB905943.1 = NZ_KB905943.1 Primary Assembly 80931 na F615DRAFT_scaffold00016.16 unplaced-scaffold na na KB905944.1 = NZ_KB905944.1 Primary Assembly 76000 na F615DRAFT_scaffold00017.17 unplaced-scaffold na na KB905945.1 = NZ_KB905945.1 Primary Assembly 72318 na F615DRAFT_scaffold00018.18 unplaced-scaffold na na KB905946.1 = NZ_KB905946.1 Primary Assembly 70731 na F615DRAFT_scaffold00019.19 unplaced-scaffold na na KB905947.1 = NZ_KB905947.1 Primary Assembly 69258 na F615DRAFT_scaffold00020.20 unplaced-scaffold na na KB905948.1 = NZ_KB905948.1 Primary Assembly 66503 na F615DRAFT_scaffold00021.21 unplaced-scaffold na na KB905949.1 = NZ_KB905949.1 Primary Assembly 56818 na F615DRAFT_scaffold00022.22 unplaced-scaffold na na KB905950.1 = NZ_KB905950.1 Primary Assembly 54678 na F615DRAFT_scaffold00023.23 unplaced-scaffold na na KB905951.1 = NZ_KB905951.1 Primary Assembly 48990 na F615DRAFT_scaffold00024.24 unplaced-scaffold na na KB905952.1 = NZ_KB905952.1 Primary Assembly 40643 na F615DRAFT_scaffold00025.25 unplaced-scaffold na na KB905953.1 = NZ_KB905953.1 Primary Assembly 40478 na F615DRAFT_scaffold00026.26 unplaced-scaffold na na KB905954.1 = NZ_KB905954.1 Primary Assembly 39209 na F615DRAFT_scaffold00027.27 unplaced-scaffold na na KB905955.1 = NZ_KB905955.1 Primary Assembly 38920 na F615DRAFT_scaffold00028.28 unplaced-scaffold na na KB905956.1 = NZ_KB905956.1 Primary Assembly 38798 na F615DRAFT_scaffold00029.29 unplaced-scaffold na na KB905957.1 = NZ_KB905957.1 Primary Assembly 38005 na F615DRAFT_scaffold00030.30 unplaced-scaffold na na KB905958.1 = NZ_KB905958.1 Primary Assembly 34501 na F615DRAFT_scaffold00031.31 unplaced-scaffold na na KB905959.1 = NZ_KB905959.1 Primary Assembly 33881 na F615DRAFT_scaffold00032.32 unplaced-scaffold na na KB905960.1 = NZ_KB905960.1 Primary Assembly 32946 na F615DRAFT_scaffold00033.33 unplaced-scaffold na na KB905961.1 = NZ_KB905961.1 Primary Assembly 33060 na F615DRAFT_scaffold00034.34 unplaced-scaffold na na KB905962.1 = NZ_KB905962.1 Primary Assembly 30707 na F615DRAFT_scaffold00035.35 unplaced-scaffold na na KB905963.1 = NZ_KB905963.1 Primary Assembly 30508 na F615DRAFT_scaffold00036.36 unplaced-scaffold na na KB905964.1 = NZ_KB905964.1 Primary Assembly 30500 na F615DRAFT_scaffold00037.37 unplaced-scaffold na na KB905965.1 = NZ_KB905965.1 Primary Assembly 30083 na F615DRAFT_scaffold00038.38 unplaced-scaffold na na KB905966.1 = NZ_KB905966.1 Primary Assembly 28588 na F615DRAFT_scaffold00039.39 unplaced-scaffold na na KB905967.1 = NZ_KB905967.1 Primary Assembly 27506 na F615DRAFT_scaffold00040.40 unplaced-scaffold na na KB905968.1 = NZ_KB905968.1 Primary Assembly 25320 na F615DRAFT_scaffold00041.41 unplaced-scaffold na na KB905969.1 = NZ_KB905969.1 Primary Assembly 24327 na F615DRAFT_scaffold00042.42 unplaced-scaffold na na KB905970.1 = NZ_KB905970.1 Primary Assembly 21576 na F615DRAFT_scaffold00043.43 unplaced-scaffold na na KB905971.1 = NZ_KB905971.1 Primary Assembly 20163 na F615DRAFT_scaffold00044.44 unplaced-scaffold na na KB905972.1 = NZ_KB905972.1 Primary Assembly 19283 na F615DRAFT_scaffold00045.45 unplaced-scaffold na na KB905973.1 = NZ_KB905973.1 Primary Assembly 17095 na F615DRAFT_scaffold00046.46 unplaced-scaffold na na KB905974.1 = NZ_KB905974.1 Primary Assembly 16921 na F615DRAFT_scaffold00047.47 unplaced-scaffold na na KB905975.1 = NZ_KB905975.1 Primary Assembly 16622 na F615DRAFT_scaffold00048.48 unplaced-scaffold na na KB905976.1 = NZ_KB905976.1 Primary Assembly 16021 na F615DRAFT_scaffold00049.49 unplaced-scaffold na na KB905977.1 = NZ_KB905977.1 Primary Assembly 12864 na F615DRAFT_scaffold00050.50 unplaced-scaffold na na KB905978.1 = NZ_KB905978.1 Primary Assembly 12416 na F615DRAFT_scaffold00051.51 unplaced-scaffold na na KB905979.1 = NZ_KB905979.1 Primary Assembly 11546 na F615DRAFT_scaffold00052.52 unplaced-scaffold na na KB905980.1 = NZ_KB905980.1 Primary Assembly 11380 na F615DRAFT_scaffold00053.53 unplaced-scaffold na na KB905981.1 = NZ_KB905981.1 Primary Assembly 11120 na F615DRAFT_scaffold00054.54 unplaced-scaffold na na KB905982.1 = NZ_KB905982.1 Primary Assembly 10455 na F615DRAFT_scaffold00055.55 unplaced-scaffold na na KB905983.1 = NZ_KB905983.1 Primary Assembly 9830 na F615DRAFT_scaffold00056.56 unplaced-scaffold na na KB905984.1 = NZ_KB905984.1 Primary Assembly 9916 na F615DRAFT_scaffold00057.57 unplaced-scaffold na na KB905985.1 = NZ_KB905985.1 Primary Assembly 8527 na F615DRAFT_scaffold00058.58 unplaced-scaffold na na KB905986.1 = NZ_KB905986.1 Primary Assembly 8433 na F615DRAFT_scaffold00059.59 unplaced-scaffold na na KB905987.1 = NZ_KB905987.1 Primary Assembly 7070 na F615DRAFT_scaffold00060.60 unplaced-scaffold na na KB905988.1 = NZ_KB905988.1 Primary Assembly 7183 na F615DRAFT_scaffold00061.61 unplaced-scaffold na na KB905989.1 = NZ_KB905989.1 Primary Assembly 7011 na F615DRAFT_scaffold00062.62 unplaced-scaffold na na KB905990.1 = NZ_KB905990.1 Primary Assembly 6368 na F615DRAFT_scaffold00063.63 unplaced-scaffold na na KB905991.1 = NZ_KB905991.1 Primary Assembly 5611 na F615DRAFT_scaffold00064.64 unplaced-scaffold na na KB905992.1 = NZ_KB905992.1 Primary Assembly 5609 na F615DRAFT_scaffold00065.65 unplaced-scaffold na na KB905993.1 = NZ_KB905993.1 Primary Assembly 5494 na F615DRAFT_scaffold00066.66 unplaced-scaffold na na KB905994.1 = NZ_KB905994.1 Primary Assembly 5430 na F615DRAFT_scaffold00067.67 unplaced-scaffold na na KB905995.1 = NZ_KB905995.1 Primary Assembly 5196 na F615DRAFT_scaffold00068.68 unplaced-scaffold na na KB905996.1 = NZ_KB905996.1 Primary Assembly 4886 na F615DRAFT_scaffold00069.69 unplaced-scaffold na na KB905997.1 = NZ_KB905997.1 Primary Assembly 4727 na F615DRAFT_scaffold00070.70 unplaced-scaffold na na KB905998.1 = NZ_KB905998.1 Primary Assembly 3477 na F615DRAFT_scaffold00071.71 unplaced-scaffold na na KB905999.1 = NZ_KB905999.1 Primary Assembly 2641 na F615DRAFT_scaffold00072.72 unplaced-scaffold na na KB906000.1 = NZ_KB906000.1 Primary Assembly 2383 na F615DRAFT_scaffold00073.73 unplaced-scaffold na na KB906001.1 = NZ_KB906001.1 Primary Assembly 2170 na F615DRAFT_scaffold00074.74 unplaced-scaffold na na KB906002.1 = NZ_KB906002.1 Primary Assembly 2183 na F615DRAFT_scaffold00075.75 unplaced-scaffold na na KB906003.1 = NZ_KB906003.1 Primary Assembly 2071 na F615DRAFT_scaffold00076.76 unplaced-scaffold na na KB906004.1 = NZ_KB906004.1 Primary Assembly 1910 na F615DRAFT_scaffold00077.77 unplaced-scaffold na na KB906005.1 = NZ_KB906005.1 Primary Assembly 1766 na F615DRAFT_scaffold00078.78 unplaced-scaffold na na KB906006.1 = NZ_KB906006.1 Primary Assembly 1604 na F615DRAFT_scaffold00079.79 unplaced-scaffold na na KB906007.1 = NZ_KB906007.1 Primary Assembly 1505 na F615DRAFT_scaffold00080.80 unplaced-scaffold na na KB906008.1 = NZ_KB906008.1 Primary Assembly 1472 na F615DRAFT_scaffold00081.81 unplaced-scaffold na na KB906009.1 = NZ_KB906009.1 Primary Assembly 1459 na F615DRAFT_scaffold00082.82 unplaced-scaffold na na KB906010.1 = NZ_KB906010.1 Primary Assembly 1459 na F615DRAFT_scaffold00083.83 unplaced-scaffold na na KB906011.1 = NZ_KB906011.1 Primary Assembly 1424 na F615DRAFT_scaffold00084.84 unplaced-scaffold na na KB906012.1 = NZ_KB906012.1 Primary Assembly 1423 na F615DRAFT_scaffold00085.85 unplaced-scaffold na na KB906013.1 = NZ_KB906013.1 Primary Assembly 1175 na F615DRAFT_scaffold00086.86 unplaced-scaffold na na KB906014.1 = NZ_KB906014.1 Primary Assembly 1235 na F615DRAFT_scaffold00087.87 unplaced-scaffold na na KB906015.1 = NZ_KB906015.1 Primary Assembly 1235 na F615DRAFT_scaffold00088.88 unplaced-scaffold na na KB906016.1 = NZ_KB906016.1 Primary Assembly 1189 na F615DRAFT_scaffold00089.89 unplaced-scaffold na na KB906017.1 = NZ_KB906017.1 Primary Assembly 1093 na