# Assembly name: ASM42378v1 # Organism name: Tetragenococcus muriaticus DSM 15685 (firmicutes) # Infraspecific name: strain=DSM 15685 # Taxid: 1123359 # BioSample: SAMN02441160 # BioProject: PRJNA185669 # Submitter: DOE Joint Genome Institute # Date: 2013-07-11 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: AUIQ01 # Assembly method: Unknown program v. before 2013-04-29 # Genome coverage: Unknown # Sequencing technology: Illumina HiSeq 2000 # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_000423785.1 # RefSeq assembly accession: GCF_000423785.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_000423795.1 GCF_000423795.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name G577DRAFT_scaffold00001.1 unplaced-scaffold na na AUIQ01000001.1 = NZ_AUIQ01000001.1 Primary Assembly 186503 na G577DRAFT_scaffold00002.2 unplaced-scaffold na na AUIQ01000002.1 = NZ_AUIQ01000002.1 Primary Assembly 92970 na G577DRAFT_scaffold00003.3 unplaced-scaffold na na AUIQ01000003.1 = NZ_AUIQ01000003.1 Primary Assembly 72862 na G577DRAFT_scaffold00004.4 unplaced-scaffold na na AUIQ01000004.1 = NZ_AUIQ01000004.1 Primary Assembly 60889 na G577DRAFT_scaffold00005.5 unplaced-scaffold na na AUIQ01000005.1 = NZ_AUIQ01000005.1 Primary Assembly 59992 na G577DRAFT_scaffold00007.7 unplaced-scaffold na na AUIQ01000008.1 = NZ_AUIQ01000008.1 Primary Assembly 53194 na G577DRAFT_scaffold00008.8 unplaced-scaffold na na AUIQ01000009.1 = NZ_AUIQ01000009.1 Primary Assembly 53461 na G577DRAFT_scaffold00009.9 unplaced-scaffold na na AUIQ01000010.1 = NZ_AUIQ01000010.1 Primary Assembly 53119 na G577DRAFT_scaffold00010.10 unplaced-scaffold na na AUIQ01000011.1 = NZ_AUIQ01000011.1 Primary Assembly 51390 na G577DRAFT_scaffold00011.11 unplaced-scaffold na na AUIQ01000012.1 = NZ_AUIQ01000012.1 Primary Assembly 47983 na G577DRAFT_scaffold00012.12 unplaced-scaffold na na AUIQ01000013.1 = NZ_AUIQ01000013.1 Primary Assembly 37298 na G577DRAFT_scaffold00013.13 unplaced-scaffold na na AUIQ01000014.1 = NZ_AUIQ01000014.1 Primary Assembly 35620 na G577DRAFT_scaffold00014.14 unplaced-scaffold na na AUIQ01000015.1 = NZ_AUIQ01000015.1 Primary Assembly 35069 na G577DRAFT_scaffold00015.15 unplaced-scaffold na na AUIQ01000016.1 = NZ_AUIQ01000016.1 Primary Assembly 33739 na G577DRAFT_scaffold00016.16 unplaced-scaffold na na AUIQ01000017.1 = NZ_AUIQ01000017.1 Primary Assembly 33344 na G577DRAFT_scaffold00017.17 unplaced-scaffold na na AUIQ01000018.1 = NZ_AUIQ01000018.1 Primary Assembly 32253 na G577DRAFT_scaffold00018.18 unplaced-scaffold na na AUIQ01000019.1 = NZ_AUIQ01000019.1 Primary Assembly 31915 na G577DRAFT_scaffold00019.19 unplaced-scaffold na na AUIQ01000020.1 = NZ_AUIQ01000020.1 Primary Assembly 30220 na G577DRAFT_scaffold00020.20 unplaced-scaffold na na AUIQ01000021.1 = NZ_AUIQ01000021.1 Primary Assembly 27744 na G577DRAFT_scaffold00021.21 unplaced-scaffold na na AUIQ01000022.1 = NZ_AUIQ01000022.1 Primary Assembly 27610 na G577DRAFT_scaffold00022.22 unplaced-scaffold na na AUIQ01000023.1 = NZ_AUIQ01000023.1 Primary Assembly 27519 na G577DRAFT_scaffold00023.23 unplaced-scaffold na na AUIQ01000024.1 = NZ_AUIQ01000024.1 Primary Assembly 27069 na G577DRAFT_scaffold00024.24 unplaced-scaffold na na AUIQ01000025.1 = NZ_AUIQ01000025.1 Primary Assembly 25577 na G577DRAFT_scaffold00025.25 unplaced-scaffold na na AUIQ01000026.1 = NZ_AUIQ01000026.1 Primary Assembly 25533 na G577DRAFT_scaffold00026.26 unplaced-scaffold na na AUIQ01000027.1 = NZ_AUIQ01000027.1 Primary Assembly 25171 na G577DRAFT_scaffold00027.27 unplaced-scaffold na na AUIQ01000028.1 = NZ_AUIQ01000028.1 Primary Assembly 24454 na G577DRAFT_scaffold00028.28 unplaced-scaffold na na AUIQ01000029.1 = NZ_AUIQ01000029.1 Primary Assembly 24242 na G577DRAFT_scaffold00029.29 unplaced-scaffold na na AUIQ01000030.1 = NZ_AUIQ01000030.1 Primary Assembly 23845 na G577DRAFT_scaffold00031.31 unplaced-scaffold na na AUIQ01000033.1 = NZ_AUIQ01000033.1 Primary Assembly 22943 na G577DRAFT_scaffold00032.32 unplaced-scaffold na na AUIQ01000034.1 = NZ_AUIQ01000034.1 Primary Assembly 22588 na G577DRAFT_scaffold00033.33 unplaced-scaffold na na AUIQ01000035.1 = NZ_AUIQ01000035.1 Primary Assembly 22377 na G577DRAFT_scaffold00034.34 unplaced-scaffold na na AUIQ01000036.1 = NZ_AUIQ01000036.1 Primary Assembly 21583 na G577DRAFT_scaffold00035.35 unplaced-scaffold na na AUIQ01000037.1 = NZ_AUIQ01000037.1 Primary Assembly 20392 na G577DRAFT_scaffold00036.36 unplaced-scaffold na na AUIQ01000038.1 = NZ_AUIQ01000038.1 Primary Assembly 20225 na G577DRAFT_scaffold00037.37 unplaced-scaffold na na AUIQ01000039.1 = NZ_AUIQ01000039.1 Primary Assembly 20138 na G577DRAFT_scaffold00038.38 unplaced-scaffold na na AUIQ01000040.1 = NZ_AUIQ01000040.1 Primary Assembly 19772 na G577DRAFT_scaffold00039.39 unplaced-scaffold na na AUIQ01000041.1 = NZ_AUIQ01000041.1 Primary Assembly 19672 na G577DRAFT_scaffold00040.40 unplaced-scaffold na na AUIQ01000042.1 = NZ_AUIQ01000042.1 Primary Assembly 19241 na G577DRAFT_scaffold00041.41 unplaced-scaffold na na AUIQ01000043.1 = NZ_AUIQ01000043.1 Primary Assembly 18408 na G577DRAFT_scaffold00042.42 unplaced-scaffold na na AUIQ01000044.1 = NZ_AUIQ01000044.1 Primary Assembly 18100 na G577DRAFT_scaffold00043.43 unplaced-scaffold na na AUIQ01000045.1 = NZ_AUIQ01000045.1 Primary Assembly 17615 na G577DRAFT_scaffold00044.44 unplaced-scaffold na na AUIQ01000046.1 = NZ_AUIQ01000046.1 Primary Assembly 17083 na G577DRAFT_scaffold00045.45 unplaced-scaffold na na AUIQ01000047.1 = NZ_AUIQ01000047.1 Primary Assembly 15670 na G577DRAFT_scaffold00046.46 unplaced-scaffold na na AUIQ01000048.1 = NZ_AUIQ01000048.1 Primary Assembly 15214 na G577DRAFT_scaffold00047.47 unplaced-scaffold na na AUIQ01000049.1 = NZ_AUIQ01000049.1 Primary Assembly 14415 na G577DRAFT_scaffold00048.48 unplaced-scaffold na na AUIQ01000050.1 = NZ_AUIQ01000050.1 Primary Assembly 14281 na G577DRAFT_scaffold00049.49 unplaced-scaffold na na AUIQ01000051.1 = NZ_AUIQ01000051.1 Primary Assembly 14071 na G577DRAFT_scaffold00050.50 unplaced-scaffold na na AUIQ01000052.1 = NZ_AUIQ01000052.1 Primary Assembly 13148 na G577DRAFT_scaffold00051.51 unplaced-scaffold na na AUIQ01000053.1 = NZ_AUIQ01000053.1 Primary Assembly 13015 na G577DRAFT_scaffold00052.52 unplaced-scaffold na na AUIQ01000054.1 = NZ_AUIQ01000054.1 Primary Assembly 12901 na G577DRAFT_scaffold00053.53 unplaced-scaffold na na AUIQ01000055.1 = NZ_AUIQ01000055.1 Primary Assembly 12509 na G577DRAFT_scaffold00054.54 unplaced-scaffold na na AUIQ01000056.1 = NZ_AUIQ01000056.1 Primary Assembly 12291 na G577DRAFT_scaffold00055.55 unplaced-scaffold na na AUIQ01000057.1 = NZ_AUIQ01000057.1 Primary Assembly 12073 na G577DRAFT_scaffold00056.56 unplaced-scaffold na na AUIQ01000058.1 = NZ_AUIQ01000058.1 Primary Assembly 11363 na G577DRAFT_scaffold00057.57 unplaced-scaffold na na AUIQ01000059.1 = NZ_AUIQ01000059.1 Primary Assembly 11315 na G577DRAFT_scaffold00058.58 unplaced-scaffold na na AUIQ01000060.1 = NZ_AUIQ01000060.1 Primary Assembly 11302 na G577DRAFT_scaffold00059.59 unplaced-scaffold na na AUIQ01000061.1 = NZ_AUIQ01000061.1 Primary Assembly 10790 na G577DRAFT_scaffold00060.60 unplaced-scaffold na na AUIQ01000062.1 = NZ_AUIQ01000062.1 Primary Assembly 10742 na G577DRAFT_scaffold00061.61 unplaced-scaffold na na AUIQ01000063.1 = NZ_AUIQ01000063.1 Primary Assembly 10523 na G577DRAFT_scaffold00062.62 unplaced-scaffold na na AUIQ01000064.1 = NZ_AUIQ01000064.1 Primary Assembly 10378 na G577DRAFT_scaffold00063.63 unplaced-scaffold na na AUIQ01000065.1 = NZ_AUIQ01000065.1 Primary Assembly 10268 na G577DRAFT_scaffold00064.64 unplaced-scaffold na na AUIQ01000066.1 = NZ_AUIQ01000066.1 Primary Assembly 10076 na G577DRAFT_scaffold00065.65 unplaced-scaffold na na AUIQ01000067.1 = NZ_AUIQ01000067.1 Primary Assembly 10033 na G577DRAFT_scaffold00066.66 unplaced-scaffold na na AUIQ01000068.1 = NZ_AUIQ01000068.1 Primary Assembly 9904 na G577DRAFT_scaffold00067.67 unplaced-scaffold na na AUIQ01000069.1 = NZ_AUIQ01000069.1 Primary Assembly 9707 na G577DRAFT_scaffold00068.68 unplaced-scaffold na na AUIQ01000070.1 = NZ_AUIQ01000070.1 Primary Assembly 9671 na G577DRAFT_scaffold00069.69 unplaced-scaffold na na AUIQ01000071.1 = NZ_AUIQ01000071.1 Primary Assembly 9511 na G577DRAFT_scaffold00070.70 unplaced-scaffold na na AUIQ01000072.1 = NZ_AUIQ01000072.1 Primary Assembly 9499 na G577DRAFT_scaffold00071.71 unplaced-scaffold na na AUIQ01000073.1 = NZ_AUIQ01000073.1 Primary Assembly 8530 na G577DRAFT_scaffold00072.72 unplaced-scaffold na na AUIQ01000074.1 = NZ_AUIQ01000074.1 Primary Assembly 7627 na G577DRAFT_scaffold00073.73 unplaced-scaffold na na AUIQ01000075.1 = NZ_AUIQ01000075.1 Primary Assembly 7573 na G577DRAFT_scaffold00074.74 unplaced-scaffold na na AUIQ01000076.1 = NZ_AUIQ01000076.1 Primary Assembly 7127 na G577DRAFT_scaffold00075.75 unplaced-scaffold na na AUIQ01000077.1 = NZ_AUIQ01000077.1 Primary Assembly 6899 na G577DRAFT_scaffold00076.76 unplaced-scaffold na na AUIQ01000078.1 = NZ_AUIQ01000078.1 Primary Assembly 6892 na G577DRAFT_scaffold00077.77 unplaced-scaffold na na AUIQ01000079.1 = NZ_AUIQ01000079.1 Primary Assembly 6656 na G577DRAFT_scaffold00078.78 unplaced-scaffold na na AUIQ01000080.1 = NZ_AUIQ01000080.1 Primary Assembly 5550 na G577DRAFT_scaffold00079.79 unplaced-scaffold na na AUIQ01000081.1 = NZ_AUIQ01000081.1 Primary Assembly 5174 na G577DRAFT_scaffold00080.80 unplaced-scaffold na na AUIQ01000082.1 = NZ_AUIQ01000082.1 Primary Assembly 5108 na G577DRAFT_scaffold00081.81 unplaced-scaffold na na AUIQ01000083.1 = NZ_AUIQ01000083.1 Primary Assembly 4848 na G577DRAFT_scaffold00082.82 unplaced-scaffold na na AUIQ01000084.1 = NZ_AUIQ01000084.1 Primary Assembly 4803 na G577DRAFT_scaffold00083.83 unplaced-scaffold na na AUIQ01000085.1 = NZ_AUIQ01000085.1 Primary Assembly 4755 na G577DRAFT_scaffold00084.84 unplaced-scaffold na na AUIQ01000086.1 = NZ_AUIQ01000086.1 Primary Assembly 4620 na G577DRAFT_scaffold00085.85 unplaced-scaffold na na AUIQ01000087.1 = NZ_AUIQ01000087.1 Primary Assembly 4467 na G577DRAFT_scaffold00086.86 unplaced-scaffold na na AUIQ01000088.1 = NZ_AUIQ01000088.1 Primary Assembly 4460 na G577DRAFT_scaffold00087.87 unplaced-scaffold na na AUIQ01000089.1 = NZ_AUIQ01000089.1 Primary Assembly 4357 na G577DRAFT_scaffold00088.88 unplaced-scaffold na na AUIQ01000090.1 = NZ_AUIQ01000090.1 Primary Assembly 3897 na G577DRAFT_scaffold00089.89 unplaced-scaffold na na AUIQ01000091.1 = NZ_AUIQ01000091.1 Primary Assembly 3735 na G577DRAFT_scaffold00090.90 unplaced-scaffold na na AUIQ01000092.1 = NZ_AUIQ01000092.1 Primary Assembly 3734 na G577DRAFT_scaffold00091.91 unplaced-scaffold na na AUIQ01000093.1 = NZ_AUIQ01000093.1 Primary Assembly 3628 na G577DRAFT_scaffold00092.92 unplaced-scaffold na na AUIQ01000094.1 = NZ_AUIQ01000094.1 Primary Assembly 3617 na G577DRAFT_scaffold00093.93 unplaced-scaffold na na AUIQ01000095.1 = NZ_AUIQ01000095.1 Primary Assembly 3393 na G577DRAFT_scaffold00094.94 unplaced-scaffold na na AUIQ01000096.1 = NZ_AUIQ01000096.1 Primary Assembly 3391 na G577DRAFT_scaffold00095.95 unplaced-scaffold na na AUIQ01000097.1 = NZ_AUIQ01000097.1 Primary Assembly 3077 na G577DRAFT_scaffold00096.96 unplaced-scaffold na na AUIQ01000098.1 = NZ_AUIQ01000098.1 Primary Assembly 3050 na G577DRAFT_scaffold00097.97 unplaced-scaffold na na AUIQ01000099.1 = NZ_AUIQ01000099.1 Primary Assembly 2597 na G577DRAFT_scaffold00098.98 unplaced-scaffold na na AUIQ01000100.1 = NZ_AUIQ01000100.1 Primary Assembly 2422 na G577DRAFT_scaffold00099.99 unplaced-scaffold na na AUIQ01000101.1 = NZ_AUIQ01000101.1 Primary Assembly 2361 na G577DRAFT_scaffold00100.100 unplaced-scaffold na na AUIQ01000102.1 = NZ_AUIQ01000102.1 Primary Assembly 2312 na G577DRAFT_scaffold00101.101 unplaced-scaffold na na AUIQ01000103.1 = NZ_AUIQ01000103.1 Primary Assembly 1992 na G577DRAFT_scaffold00102.102 unplaced-scaffold na na AUIQ01000104.1 = NZ_AUIQ01000104.1 Primary Assembly 1827 na G577DRAFT_scaffold00103.103 unplaced-scaffold na na AUIQ01000105.1 = NZ_AUIQ01000105.1 Primary Assembly 1817 na G577DRAFT_scaffold00104.104 unplaced-scaffold na na AUIQ01000106.1 = NZ_AUIQ01000106.1 Primary Assembly 1799 na G577DRAFT_scaffold00105.105 unplaced-scaffold na na AUIQ01000107.1 = NZ_AUIQ01000107.1 Primary Assembly 1509 na G577DRAFT_scaffold00106.106 unplaced-scaffold na na AUIQ01000108.1 = NZ_AUIQ01000108.1 Primary Assembly 1498 na G577DRAFT_scaffold00107.107 unplaced-scaffold na na AUIQ01000109.1 = NZ_AUIQ01000109.1 Primary Assembly 1316 na G577DRAFT_scaffold00108.108 unplaced-scaffold na na AUIQ01000110.1 = NZ_AUIQ01000110.1 Primary Assembly 1280 na G577DRAFT_scaffold00109.109 unplaced-scaffold na na AUIQ01000111.1 = NZ_AUIQ01000111.1 Primary Assembly 1259 na G577DRAFT_scaffold00006.6 unplaced-scaffold na na KE384091.1 = NZ_KE384091.1 Primary Assembly 57445 na G577DRAFT_scaffold00030.30 unplaced-scaffold na na KE384092.1 = NZ_KE384092.1 Primary Assembly 23760 na