# Assembly name: ASM42538v1 # Organism name: Pseudoduganella violaceinigra DSM 15887 (b-proteobacteria) # Infraspecific name: strain=DSM 15887 # Taxid: 1121480 # BioSample: SAMN02440629 # BioProject: PRJNA188890 # Submitter: DOE Joint Genome Institute # Date: 2013-07-11 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: AUDI01 # Assembly method: Unknown program v. before 2013-04-04 # Genome coverage: Unknown # Sequencing technology: Illumina HiSeq 2000 # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_000425385.1 # RefSeq assembly accession: GCF_000425385.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_000425395.1 GCF_000425395.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name H597DRAFT_scaffold00001.1 unplaced-scaffold na na AUDI01000001.1 = NZ_AUDI01000001.1 Primary Assembly 786796 na H597DRAFT_scaffold00003.3 unplaced-scaffold na na AUDI01000004.1 = NZ_AUDI01000004.1 Primary Assembly 581276 na H597DRAFT_scaffold00006.6 unplaced-scaffold na na AUDI01000009.1 = NZ_AUDI01000009.1 Primary Assembly 346447 na H597DRAFT_scaffold00008.8 unplaced-scaffold na na AUDI01000012.1 = NZ_AUDI01000012.1 Primary Assembly 282262 na H597DRAFT_scaffold00010.10 unplaced-scaffold na na AUDI01000015.1 = NZ_AUDI01000015.1 Primary Assembly 278701 na H597DRAFT_scaffold00011.11 unplaced-scaffold na na AUDI01000016.1 = NZ_AUDI01000016.1 Primary Assembly 262426 na H597DRAFT_scaffold00013.13 unplaced-scaffold na na AUDI01000019.1 = NZ_AUDI01000019.1 Primary Assembly 247514 na H597DRAFT_scaffold00014.14 unplaced-scaffold na na AUDI01000020.1 = NZ_AUDI01000020.1 Primary Assembly 179387 na H597DRAFT_scaffold00015.15 unplaced-scaffold na na AUDI01000021.1 = NZ_AUDI01000021.1 Primary Assembly 94288 na H597DRAFT_scaffold00016.16 unplaced-scaffold na na AUDI01000022.1 = NZ_AUDI01000022.1 Primary Assembly 70281 na H597DRAFT_scaffold00017.17 unplaced-scaffold na na AUDI01000023.1 = NZ_AUDI01000023.1 Primary Assembly 69297 na H597DRAFT_scaffold00019.19 unplaced-scaffold na na AUDI01000026.1 = NZ_AUDI01000026.1 Primary Assembly 68984 na H597DRAFT_scaffold00020.20 unplaced-scaffold na na AUDI01000027.1 = NZ_AUDI01000027.1 Primary Assembly 50166 na H597DRAFT_scaffold00021.21 unplaced-scaffold na na AUDI01000028.1 = NZ_AUDI01000028.1 Primary Assembly 42099 na H597DRAFT_scaffold00022.22 unplaced-scaffold na na AUDI01000029.1 = NZ_AUDI01000029.1 Primary Assembly 30311 na H597DRAFT_scaffold00023.23 unplaced-scaffold na na AUDI01000030.1 = NZ_AUDI01000030.1 Primary Assembly 27707 na H597DRAFT_scaffold00024.24 unplaced-scaffold na na AUDI01000031.1 = NZ_AUDI01000031.1 Primary Assembly 26707 na H597DRAFT_scaffold00025.25 unplaced-scaffold na na AUDI01000032.1 = NZ_AUDI01000032.1 Primary Assembly 16073 na H597DRAFT_scaffold00026.26 unplaced-scaffold na na AUDI01000033.1 = NZ_AUDI01000033.1 Primary Assembly 13787 na H597DRAFT_scaffold00027.27 unplaced-scaffold na na AUDI01000034.1 = NZ_AUDI01000034.1 Primary Assembly 7041 na H597DRAFT_scaffold00028.28 unplaced-scaffold na na AUDI01000035.1 = NZ_AUDI01000035.1 Primary Assembly 3400 na H597DRAFT_scaffold00029.29 unplaced-scaffold na na AUDI01000036.1 = NZ_AUDI01000036.1 Primary Assembly 2848 na H597DRAFT_scaffold00030.30 unplaced-scaffold na na AUDI01000037.1 = NZ_AUDI01000037.1 Primary Assembly 2842 na H597DRAFT_scaffold00031.31 unplaced-scaffold na na AUDI01000038.1 = NZ_AUDI01000038.1 Primary Assembly 2119 na H597DRAFT_scaffold00032.32 unplaced-scaffold na na AUDI01000039.1 = NZ_AUDI01000039.1 Primary Assembly 2152 na H597DRAFT_scaffold00033.33 unplaced-scaffold na na AUDI01000040.1 = NZ_AUDI01000040.1 Primary Assembly 1955 na H597DRAFT_scaffold00034.34 unplaced-scaffold na na AUDI01000041.1 = NZ_AUDI01000041.1 Primary Assembly 1879 na H597DRAFT_scaffold00035.35 unplaced-scaffold na na AUDI01000042.1 = NZ_AUDI01000042.1 Primary Assembly 1522 na H597DRAFT_scaffold00036.36 unplaced-scaffold na na AUDI01000043.1 = NZ_AUDI01000043.1 Primary Assembly 1437 na H597DRAFT_scaffold00037.37 unplaced-scaffold na na AUDI01000044.1 = NZ_AUDI01000044.1 Primary Assembly 1409 na H597DRAFT_scaffold00038.38 unplaced-scaffold na na AUDI01000045.1 = NZ_AUDI01000045.1 Primary Assembly 1318 na H597DRAFT_scaffold00039.39 unplaced-scaffold na na AUDI01000046.1 = NZ_AUDI01000046.1 Primary Assembly 1273 na H597DRAFT_scaffold00040.40 unplaced-scaffold na na AUDI01000047.1 = NZ_AUDI01000047.1 Primary Assembly 1177 na H597DRAFT_scaffold00041.41 unplaced-scaffold na na AUDI01000048.1 = NZ_AUDI01000048.1 Primary Assembly 1044 na H597DRAFT_scaffold00002.2 unplaced-scaffold na na KE384356.1 = NZ_KE384356.1 Primary Assembly 615872 na H597DRAFT_scaffold00004.4 unplaced-scaffold na na KE384357.1 = NZ_KE384357.1 Primary Assembly 547181 na H597DRAFT_scaffold00005.5 unplaced-scaffold na na KE384358.1 = NZ_KE384358.1 Primary Assembly 495389 na H597DRAFT_scaffold00007.7 unplaced-scaffold na na KE384359.1 = NZ_KE384359.1 Primary Assembly 332351 na H597DRAFT_scaffold00009.9 unplaced-scaffold na na KE384360.1 = NZ_KE384360.1 Primary Assembly 281465 na H597DRAFT_scaffold00012.12 unplaced-scaffold na na KE384361.1 = NZ_KE384361.1 Primary Assembly 261081 na H597DRAFT_scaffold00018.18 unplaced-scaffold na na KE384362.1 = NZ_KE384362.1 Primary Assembly 69085 na