# Assembly name: ASM42958v1 # Organism name: Atopococcus tabaci DSM 17538 (firmicutes) # Infraspecific name: strain=DSM 17538 # Taxid: 1121024 # BioSample: SAMN02441188 # BioProject: PRJNA185553 # Submitter: DOE Joint Genome Institute # Date: 2013-09-05 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: AUCD01 # Assembly method: Unknown program v. before 2013-04-10 # Genome coverage: Unknown # Sequencing technology: Illumina HiSeq 2000 # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_000429585.1 # RefSeq assembly accession: GCF_000429585.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_000429595.1 GCF_000429595.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name G470DRAFT_scaffold00001.1 unplaced-scaffold na na AUCD01000001.1 = NZ_AUCD01000001.1 Primary Assembly 121006 na G470DRAFT_scaffold00002.2 unplaced-scaffold na na AUCD01000002.1 = NZ_AUCD01000002.1 Primary Assembly 92391 na G470DRAFT_scaffold00003.3 unplaced-scaffold na na AUCD01000003.1 = NZ_AUCD01000003.1 Primary Assembly 82895 na G470DRAFT_scaffold00004.4 unplaced-scaffold na na AUCD01000004.1 = NZ_AUCD01000004.1 Primary Assembly 68973 na G470DRAFT_scaffold00006.6 unplaced-scaffold na na AUCD01000007.1 = NZ_AUCD01000007.1 Primary Assembly 56083 na G470DRAFT_scaffold00007.7 unplaced-scaffold na na AUCD01000008.1 = NZ_AUCD01000008.1 Primary Assembly 54371 na G470DRAFT_scaffold00008.8 unplaced-scaffold na na AUCD01000009.1 = NZ_AUCD01000009.1 Primary Assembly 46561 na G470DRAFT_scaffold00009.9 unplaced-scaffold na na AUCD01000010.1 = NZ_AUCD01000010.1 Primary Assembly 43345 na G470DRAFT_scaffold00010.10 unplaced-scaffold na na AUCD01000011.1 = NZ_AUCD01000011.1 Primary Assembly 42253 na G470DRAFT_scaffold00011.11 unplaced-scaffold na na AUCD01000012.1 = NZ_AUCD01000012.1 Primary Assembly 41527 na G470DRAFT_scaffold00012.12 unplaced-scaffold na na AUCD01000013.1 = NZ_AUCD01000013.1 Primary Assembly 41481 na G470DRAFT_scaffold00013.13 unplaced-scaffold na na AUCD01000014.1 = NZ_AUCD01000014.1 Primary Assembly 35528 na G470DRAFT_scaffold00014.14 unplaced-scaffold na na AUCD01000015.1 = NZ_AUCD01000015.1 Primary Assembly 35296 na G470DRAFT_scaffold00015.15 unplaced-scaffold na na AUCD01000016.1 = NZ_AUCD01000016.1 Primary Assembly 33180 na G470DRAFT_scaffold00016.16 unplaced-scaffold na na AUCD01000017.1 = NZ_AUCD01000017.1 Primary Assembly 33175 na G470DRAFT_scaffold00017.17 unplaced-scaffold na na AUCD01000018.1 = NZ_AUCD01000018.1 Primary Assembly 32924 na G470DRAFT_scaffold00018.18 unplaced-scaffold na na AUCD01000019.1 = NZ_AUCD01000019.1 Primary Assembly 32025 na G470DRAFT_scaffold00019.19 unplaced-scaffold na na AUCD01000020.1 = NZ_AUCD01000020.1 Primary Assembly 31701 na G470DRAFT_scaffold00020.20 unplaced-scaffold na na AUCD01000021.1 = NZ_AUCD01000021.1 Primary Assembly 29993 na G470DRAFT_scaffold00021.21 unplaced-scaffold na na AUCD01000022.1 = NZ_AUCD01000022.1 Primary Assembly 29756 na G470DRAFT_scaffold00022.22 unplaced-scaffold na na AUCD01000023.1 = NZ_AUCD01000023.1 Primary Assembly 29232 na G470DRAFT_scaffold00023.23 unplaced-scaffold na na AUCD01000024.1 = NZ_AUCD01000024.1 Primary Assembly 27780 na G470DRAFT_scaffold00024.24 unplaced-scaffold na na AUCD01000025.1 = NZ_AUCD01000025.1 Primary Assembly 25865 na G470DRAFT_scaffold00025.25 unplaced-scaffold na na AUCD01000026.1 = NZ_AUCD01000026.1 Primary Assembly 25820 na G470DRAFT_scaffold00026.26 unplaced-scaffold na na AUCD01000027.1 = NZ_AUCD01000027.1 Primary Assembly 24744 na G470DRAFT_scaffold00027.27 unplaced-scaffold na na AUCD01000028.1 = NZ_AUCD01000028.1 Primary Assembly 24157 na G470DRAFT_scaffold00028.28 unplaced-scaffold na na AUCD01000029.1 = NZ_AUCD01000029.1 Primary Assembly 23912 na G470DRAFT_scaffold00029.29 unplaced-scaffold na na AUCD01000030.1 = NZ_AUCD01000030.1 Primary Assembly 23449 na G470DRAFT_scaffold00030.30 unplaced-scaffold na na AUCD01000031.1 = NZ_AUCD01000031.1 Primary Assembly 23355 na G470DRAFT_scaffold00031.31 unplaced-scaffold na na AUCD01000032.1 = NZ_AUCD01000032.1 Primary Assembly 23187 na G470DRAFT_scaffold00032.32 unplaced-scaffold na na AUCD01000033.1 = NZ_AUCD01000033.1 Primary Assembly 22829 na G470DRAFT_scaffold00033.33 unplaced-scaffold na na AUCD01000034.1 = NZ_AUCD01000034.1 Primary Assembly 22273 na G470DRAFT_scaffold00034.34 unplaced-scaffold na na AUCD01000035.1 = NZ_AUCD01000035.1 Primary Assembly 21594 na G470DRAFT_scaffold00035.35 unplaced-scaffold na na AUCD01000036.1 = NZ_AUCD01000036.1 Primary Assembly 20875 na G470DRAFT_scaffold00036.36 unplaced-scaffold na na AUCD01000037.1 = NZ_AUCD01000037.1 Primary Assembly 20471 na G470DRAFT_scaffold00037.37 unplaced-scaffold na na AUCD01000038.1 = NZ_AUCD01000038.1 Primary Assembly 20286 na G470DRAFT_scaffold00038.38 unplaced-scaffold na na AUCD01000039.1 = NZ_AUCD01000039.1 Primary Assembly 19843 na G470DRAFT_scaffold00039.39 unplaced-scaffold na na AUCD01000040.1 = NZ_AUCD01000040.1 Primary Assembly 19801 na G470DRAFT_scaffold00040.40 unplaced-scaffold na na AUCD01000041.1 = NZ_AUCD01000041.1 Primary Assembly 19765 na G470DRAFT_scaffold00042.42 unplaced-scaffold na na AUCD01000044.1 = NZ_AUCD01000044.1 Primary Assembly 18706 na G470DRAFT_scaffold00043.43 unplaced-scaffold na na AUCD01000045.1 = NZ_AUCD01000045.1 Primary Assembly 18506 na G470DRAFT_scaffold00044.44 unplaced-scaffold na na AUCD01000046.1 = NZ_AUCD01000046.1 Primary Assembly 18379 na G470DRAFT_scaffold00045.45 unplaced-scaffold na na AUCD01000047.1 = NZ_AUCD01000047.1 Primary Assembly 17863 na G470DRAFT_scaffold00046.46 unplaced-scaffold na na AUCD01000048.1 = NZ_AUCD01000048.1 Primary Assembly 17848 na G470DRAFT_scaffold00047.47 unplaced-scaffold na na AUCD01000049.1 = NZ_AUCD01000049.1 Primary Assembly 17833 na G470DRAFT_scaffold00048.48 unplaced-scaffold na na AUCD01000050.1 = NZ_AUCD01000050.1 Primary Assembly 17514 na G470DRAFT_scaffold00049.49 unplaced-scaffold na na AUCD01000051.1 = NZ_AUCD01000051.1 Primary Assembly 17335 na G470DRAFT_scaffold00050.50 unplaced-scaffold na na AUCD01000052.1 = NZ_AUCD01000052.1 Primary Assembly 17184 na G470DRAFT_scaffold00051.51 unplaced-scaffold na na AUCD01000053.1 = NZ_AUCD01000053.1 Primary Assembly 16798 na G470DRAFT_scaffold00052.52 unplaced-scaffold na na AUCD01000054.1 = NZ_AUCD01000054.1 Primary Assembly 16447 na G470DRAFT_scaffold00053.53 unplaced-scaffold na na AUCD01000055.1 = NZ_AUCD01000055.1 Primary Assembly 16406 na G470DRAFT_scaffold00054.54 unplaced-scaffold na na AUCD01000056.1 = NZ_AUCD01000056.1 Primary Assembly 16030 na G470DRAFT_scaffold00055.55 unplaced-scaffold na na AUCD01000057.1 = NZ_AUCD01000057.1 Primary Assembly 15758 na G470DRAFT_scaffold00056.56 unplaced-scaffold na na AUCD01000058.1 = NZ_AUCD01000058.1 Primary Assembly 15542 na G470DRAFT_scaffold00057.57 unplaced-scaffold na na AUCD01000059.1 = NZ_AUCD01000059.1 Primary Assembly 15453 na G470DRAFT_scaffold00058.58 unplaced-scaffold na na AUCD01000060.1 = NZ_AUCD01000060.1 Primary Assembly 15107 na G470DRAFT_scaffold00059.59 unplaced-scaffold na na AUCD01000061.1 = NZ_AUCD01000061.1 Primary Assembly 15072 na G470DRAFT_scaffold00060.60 unplaced-scaffold na na AUCD01000062.1 = NZ_AUCD01000062.1 Primary Assembly 14712 na G470DRAFT_scaffold00061.61 unplaced-scaffold na na AUCD01000063.1 = NZ_AUCD01000063.1 Primary Assembly 14211 na G470DRAFT_scaffold00062.62 unplaced-scaffold na na AUCD01000064.1 = NZ_AUCD01000064.1 Primary Assembly 14054 na G470DRAFT_scaffold00063.63 unplaced-scaffold na na AUCD01000065.1 = NZ_AUCD01000065.1 Primary Assembly 13809 na G470DRAFT_scaffold00064.64 unplaced-scaffold na na AUCD01000066.1 = NZ_AUCD01000066.1 Primary Assembly 13657 na G470DRAFT_scaffold00065.65 unplaced-scaffold na na AUCD01000067.1 = NZ_AUCD01000067.1 Primary Assembly 13374 na G470DRAFT_scaffold00066.66 unplaced-scaffold na na AUCD01000068.1 = NZ_AUCD01000068.1 Primary Assembly 12969 na G470DRAFT_scaffold00067.67 unplaced-scaffold na na AUCD01000069.1 = NZ_AUCD01000069.1 Primary Assembly 11737 na G470DRAFT_scaffold00068.68 unplaced-scaffold na na AUCD01000070.1 = NZ_AUCD01000070.1 Primary Assembly 11599 na G470DRAFT_scaffold00069.69 unplaced-scaffold na na AUCD01000071.1 = NZ_AUCD01000071.1 Primary Assembly 11594 na G470DRAFT_scaffold00070.70 unplaced-scaffold na na AUCD01000072.1 = NZ_AUCD01000072.1 Primary Assembly 11490 na G470DRAFT_scaffold00071.71 unplaced-scaffold na na AUCD01000073.1 = NZ_AUCD01000073.1 Primary Assembly 11364 na G470DRAFT_scaffold00072.72 unplaced-scaffold na na AUCD01000074.1 = NZ_AUCD01000074.1 Primary Assembly 10340 na G470DRAFT_scaffold00073.73 unplaced-scaffold na na AUCD01000075.1 = NZ_AUCD01000075.1 Primary Assembly 10219 na G470DRAFT_scaffold00074.74 unplaced-scaffold na na AUCD01000076.1 = NZ_AUCD01000076.1 Primary Assembly 10202 na G470DRAFT_scaffold00075.75 unplaced-scaffold na na AUCD01000077.1 = NZ_AUCD01000077.1 Primary Assembly 10197 na G470DRAFT_scaffold00076.76 unplaced-scaffold na na AUCD01000078.1 = NZ_AUCD01000078.1 Primary Assembly 9682 na G470DRAFT_scaffold00077.77 unplaced-scaffold na na AUCD01000079.1 = NZ_AUCD01000079.1 Primary Assembly 9607 na G470DRAFT_scaffold00078.78 unplaced-scaffold na na AUCD01000080.1 = NZ_AUCD01000080.1 Primary Assembly 9492 na G470DRAFT_scaffold00079.79 unplaced-scaffold na na AUCD01000081.1 = NZ_AUCD01000081.1 Primary Assembly 9351 na G470DRAFT_scaffold00080.80 unplaced-scaffold na na AUCD01000082.1 = NZ_AUCD01000082.1 Primary Assembly 9035 na G470DRAFT_scaffold00081.81 unplaced-scaffold na na AUCD01000083.1 = NZ_AUCD01000083.1 Primary Assembly 9032 na G470DRAFT_scaffold00082.82 unplaced-scaffold na na AUCD01000084.1 = NZ_AUCD01000084.1 Primary Assembly 8967 na G470DRAFT_scaffold00083.83 unplaced-scaffold na na AUCD01000085.1 = NZ_AUCD01000085.1 Primary Assembly 8592 na G470DRAFT_scaffold00084.84 unplaced-scaffold na na AUCD01000086.1 = NZ_AUCD01000086.1 Primary Assembly 8403 na G470DRAFT_scaffold00085.85 unplaced-scaffold na na AUCD01000087.1 = NZ_AUCD01000087.1 Primary Assembly 8278 na G470DRAFT_scaffold00086.86 unplaced-scaffold na na AUCD01000088.1 = NZ_AUCD01000088.1 Primary Assembly 7812 na G470DRAFT_scaffold00087.87 unplaced-scaffold na na AUCD01000089.1 = NZ_AUCD01000089.1 Primary Assembly 7147 na G470DRAFT_scaffold00088.88 unplaced-scaffold na na AUCD01000090.1 = NZ_AUCD01000090.1 Primary Assembly 6970 na G470DRAFT_scaffold00089.89 unplaced-scaffold na na AUCD01000091.1 = NZ_AUCD01000091.1 Primary Assembly 6943 na G470DRAFT_scaffold00090.90 unplaced-scaffold na na AUCD01000092.1 = NZ_AUCD01000092.1 Primary Assembly 6911 na G470DRAFT_scaffold00091.91 unplaced-scaffold na na AUCD01000093.1 = NZ_AUCD01000093.1 Primary Assembly 6361 na G470DRAFT_scaffold00092.92 unplaced-scaffold na na AUCD01000094.1 = NZ_AUCD01000094.1 Primary Assembly 6268 na G470DRAFT_scaffold00093.93 unplaced-scaffold na na AUCD01000095.1 = NZ_AUCD01000095.1 Primary Assembly 5979 na G470DRAFT_scaffold00094.94 unplaced-scaffold na na AUCD01000096.1 = NZ_AUCD01000096.1 Primary Assembly 5887 na G470DRAFT_scaffold00095.95 unplaced-scaffold na na AUCD01000097.1 = NZ_AUCD01000097.1 Primary Assembly 5680 na G470DRAFT_scaffold00096.96 unplaced-scaffold na na AUCD01000098.1 = NZ_AUCD01000098.1 Primary Assembly 5503 na G470DRAFT_scaffold00097.97 unplaced-scaffold na na AUCD01000099.1 = NZ_AUCD01000099.1 Primary Assembly 5483 na G470DRAFT_scaffold00098.98 unplaced-scaffold na na AUCD01000100.1 = NZ_AUCD01000100.1 Primary Assembly 5457 na G470DRAFT_scaffold00099.99 unplaced-scaffold na na AUCD01000101.1 = NZ_AUCD01000101.1 Primary Assembly 5349 na G470DRAFT_scaffold00100.100 unplaced-scaffold na na AUCD01000102.1 = NZ_AUCD01000102.1 Primary Assembly 5127 na G470DRAFT_scaffold00101.101 unplaced-scaffold na na AUCD01000103.1 = NZ_AUCD01000103.1 Primary Assembly 5094 na G470DRAFT_scaffold00102.102 unplaced-scaffold na na AUCD01000104.1 = NZ_AUCD01000104.1 Primary Assembly 4921 na G470DRAFT_scaffold00103.103 unplaced-scaffold na na AUCD01000105.1 = NZ_AUCD01000105.1 Primary Assembly 4547 na G470DRAFT_scaffold00104.104 unplaced-scaffold na na AUCD01000106.1 = NZ_AUCD01000106.1 Primary Assembly 4542 na G470DRAFT_scaffold00105.105 unplaced-scaffold na na AUCD01000107.1 = NZ_AUCD01000107.1 Primary Assembly 3790 na G470DRAFT_scaffold00106.106 unplaced-scaffold na na AUCD01000108.1 = NZ_AUCD01000108.1 Primary Assembly 3338 na G470DRAFT_scaffold00107.107 unplaced-scaffold na na AUCD01000109.1 = NZ_AUCD01000109.1 Primary Assembly 3328 na G470DRAFT_scaffold00108.108 unplaced-scaffold na na AUCD01000110.1 = NZ_AUCD01000110.1 Primary Assembly 3031 na G470DRAFT_scaffold00109.109 unplaced-scaffold na na AUCD01000111.1 = NZ_AUCD01000111.1 Primary Assembly 2709 na G470DRAFT_scaffold00110.110 unplaced-scaffold na na AUCD01000112.1 = NZ_AUCD01000112.1 Primary Assembly 2608 na G470DRAFT_scaffold00111.111 unplaced-scaffold na na AUCD01000113.1 = NZ_AUCD01000113.1 Primary Assembly 2486 na G470DRAFT_scaffold00112.112 unplaced-scaffold na na AUCD01000114.1 = NZ_AUCD01000114.1 Primary Assembly 2413 na G470DRAFT_scaffold00113.113 unplaced-scaffold na na AUCD01000115.1 = NZ_AUCD01000115.1 Primary Assembly 2397 na G470DRAFT_scaffold00114.114 unplaced-scaffold na na AUCD01000116.1 = NZ_AUCD01000116.1 Primary Assembly 2258 na G470DRAFT_scaffold00115.115 unplaced-scaffold na na AUCD01000117.1 = NZ_AUCD01000117.1 Primary Assembly 2237 na G470DRAFT_scaffold00116.116 unplaced-scaffold na na AUCD01000118.1 = NZ_AUCD01000118.1 Primary Assembly 2031 na G470DRAFT_scaffold00117.117 unplaced-scaffold na na AUCD01000119.1 = NZ_AUCD01000119.1 Primary Assembly 2006 na G470DRAFT_scaffold00118.118 unplaced-scaffold na na AUCD01000120.1 = NZ_AUCD01000120.1 Primary Assembly 1949 na G470DRAFT_scaffold00119.119 unplaced-scaffold na na AUCD01000121.1 = NZ_AUCD01000121.1 Primary Assembly 1888 na G470DRAFT_scaffold00120.120 unplaced-scaffold na na AUCD01000122.1 = NZ_AUCD01000122.1 Primary Assembly 1677 na G470DRAFT_scaffold00121.121 unplaced-scaffold na na AUCD01000123.1 = NZ_AUCD01000123.1 Primary Assembly 1676 na G470DRAFT_scaffold00122.122 unplaced-scaffold na na AUCD01000124.1 = NZ_AUCD01000124.1 Primary Assembly 1603 na G470DRAFT_scaffold00123.123 unplaced-scaffold na na AUCD01000125.1 = NZ_AUCD01000125.1 Primary Assembly 1567 na G470DRAFT_scaffold00124.124 unplaced-scaffold na na AUCD01000126.1 = NZ_AUCD01000126.1 Primary Assembly 1492 na G470DRAFT_scaffold00125.125 unplaced-scaffold na na AUCD01000127.1 = NZ_AUCD01000127.1 Primary Assembly 1457 na G470DRAFT_scaffold00126.126 unplaced-scaffold na na AUCD01000128.1 = NZ_AUCD01000128.1 Primary Assembly 1452 na G470DRAFT_scaffold00127.127 unplaced-scaffold na na AUCD01000129.1 = NZ_AUCD01000129.1 Primary Assembly 1439 na G470DRAFT_scaffold00128.128 unplaced-scaffold na na AUCD01000130.1 = NZ_AUCD01000130.1 Primary Assembly 1433 na G470DRAFT_scaffold00129.129 unplaced-scaffold na na AUCD01000131.1 = NZ_AUCD01000131.1 Primary Assembly 1413 na G470DRAFT_scaffold00130.130 unplaced-scaffold na na AUCD01000132.1 = NZ_AUCD01000132.1 Primary Assembly 1406 na G470DRAFT_scaffold00131.131 unplaced-scaffold na na AUCD01000133.1 = NZ_AUCD01000133.1 Primary Assembly 1405 na G470DRAFT_scaffold00132.132 unplaced-scaffold na na AUCD01000134.1 = NZ_AUCD01000134.1 Primary Assembly 1367 na G470DRAFT_scaffold00133.133 unplaced-scaffold na na AUCD01000135.1 = NZ_AUCD01000135.1 Primary Assembly 1361 na G470DRAFT_scaffold00134.134 unplaced-scaffold na na AUCD01000136.1 = NZ_AUCD01000136.1 Primary Assembly 1246 na G470DRAFT_scaffold00135.135 unplaced-scaffold na na AUCD01000137.1 = NZ_AUCD01000137.1 Primary Assembly 1207 na G470DRAFT_scaffold00136.136 unplaced-scaffold na na AUCD01000138.1 = NZ_AUCD01000138.1 Primary Assembly 1180 na G470DRAFT_scaffold00137.137 unplaced-scaffold na na AUCD01000139.1 = NZ_AUCD01000139.1 Primary Assembly 1099 na G470DRAFT_scaffold00138.138 unplaced-scaffold na na AUCD01000140.1 = NZ_AUCD01000140.1 Primary Assembly 1091 na G470DRAFT_scaffold00139.139 unplaced-scaffold na na AUCD01000141.1 = NZ_AUCD01000141.1 Primary Assembly 1085 na G470DRAFT_scaffold00005.5 unplaced-scaffold na na KE386923.1 = NZ_KE386923.1 Primary Assembly 56670 na G470DRAFT_scaffold00041.41 unplaced-scaffold na na KE386924.1 = NZ_KE386924.1 Primary Assembly 18975 na