# Assembly name: ASM42994v1 # Organism name: Desulfogranum japonicum DSM 18378 (bacteria) # Infraspecific name: strain=DSM 18378 # Taxid: 1121403 # BioSample: SAMN02440624 # BioProject: PRJNA185576 # Submitter: DOE Joint Genome Institute # Date: 2013-07-15 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: AUCV01 # Assembly method: Unknown program v. before 2013-05-09 # Genome coverage: Unknown # Sequencing technology: Illumina HiSeq 2000 # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_000429945.1 # RefSeq assembly accession: GCF_000429945.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_000429955.1 GCF_000429955.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name G493DRAFT_scaffold00001.1 unplaced-scaffold na na AUCV01000001.1 = NZ_AUCV01000001.1 Primary Assembly 452846 na G493DRAFT_scaffold00002.2 unplaced-scaffold na na AUCV01000002.1 = NZ_AUCV01000002.1 Primary Assembly 265476 na G493DRAFT_scaffold00003.3 unplaced-scaffold na na AUCV01000003.1 = NZ_AUCV01000003.1 Primary Assembly 256173 na G493DRAFT_scaffold00004.4 unplaced-scaffold na na AUCV01000004.1 = NZ_AUCV01000004.1 Primary Assembly 232584 na G493DRAFT_scaffold00005.5 unplaced-scaffold na na AUCV01000005.1 = NZ_AUCV01000005.1 Primary Assembly 209552 na G493DRAFT_scaffold00007.7 unplaced-scaffold na na AUCV01000008.1 = NZ_AUCV01000008.1 Primary Assembly 196859 na G493DRAFT_scaffold00010.10 unplaced-scaffold na na AUCV01000013.1 = NZ_AUCV01000013.1 Primary Assembly 148817 na G493DRAFT_scaffold00011.11 unplaced-scaffold na na AUCV01000014.1 = NZ_AUCV01000014.1 Primary Assembly 138453 na G493DRAFT_scaffold00013.13 unplaced-scaffold na na AUCV01000017.1 = NZ_AUCV01000017.1 Primary Assembly 124647 na G493DRAFT_scaffold00014.14 unplaced-scaffold na na AUCV01000018.1 = NZ_AUCV01000018.1 Primary Assembly 121141 na G493DRAFT_scaffold00015.15 unplaced-scaffold na na AUCV01000019.1 = NZ_AUCV01000019.1 Primary Assembly 118543 na G493DRAFT_scaffold00016.16 unplaced-scaffold na na AUCV01000020.1 = NZ_AUCV01000020.1 Primary Assembly 113027 na G493DRAFT_scaffold00017.17 unplaced-scaffold na na AUCV01000021.1 = NZ_AUCV01000021.1 Primary Assembly 109709 na G493DRAFT_scaffold00018.18 unplaced-scaffold na na AUCV01000022.1 = NZ_AUCV01000022.1 Primary Assembly 104146 na G493DRAFT_scaffold00020.20 unplaced-scaffold na na AUCV01000025.1 = NZ_AUCV01000025.1 Primary Assembly 89907 na G493DRAFT_scaffold00021.21 unplaced-scaffold na na AUCV01000026.1 = NZ_AUCV01000026.1 Primary Assembly 89416 na G493DRAFT_scaffold00022.22 unplaced-scaffold na na AUCV01000027.1 = NZ_AUCV01000027.1 Primary Assembly 88238 na G493DRAFT_scaffold00023.23 unplaced-scaffold na na AUCV01000028.1 = NZ_AUCV01000028.1 Primary Assembly 87238 na G493DRAFT_scaffold00024.24 unplaced-scaffold na na AUCV01000029.1 = NZ_AUCV01000029.1 Primary Assembly 84671 na G493DRAFT_scaffold00025.25 unplaced-scaffold na na AUCV01000030.1 = NZ_AUCV01000030.1 Primary Assembly 81105 na G493DRAFT_scaffold00026.26 unplaced-scaffold na na AUCV01000031.1 = NZ_AUCV01000031.1 Primary Assembly 78202 na G493DRAFT_scaffold00027.27 unplaced-scaffold na na AUCV01000032.1 = NZ_AUCV01000032.1 Primary Assembly 74537 na G493DRAFT_scaffold00028.28 unplaced-scaffold na na AUCV01000033.1 = NZ_AUCV01000033.1 Primary Assembly 70078 na G493DRAFT_scaffold00029.29 unplaced-scaffold na na AUCV01000034.1 = NZ_AUCV01000034.1 Primary Assembly 69736 na G493DRAFT_scaffold00030.30 unplaced-scaffold na na AUCV01000035.1 = NZ_AUCV01000035.1 Primary Assembly 65101 na G493DRAFT_scaffold00031.31 unplaced-scaffold na na AUCV01000036.1 = NZ_AUCV01000036.1 Primary Assembly 60367 na G493DRAFT_scaffold00033.33 unplaced-scaffold na na AUCV01000039.1 = NZ_AUCV01000039.1 Primary Assembly 60293 na G493DRAFT_scaffold00034.34 unplaced-scaffold na na AUCV01000040.1 = NZ_AUCV01000040.1 Primary Assembly 60198 na G493DRAFT_scaffold00035.35 unplaced-scaffold na na AUCV01000041.1 = NZ_AUCV01000041.1 Primary Assembly 56582 na G493DRAFT_scaffold00036.36 unplaced-scaffold na na AUCV01000042.1 = NZ_AUCV01000042.1 Primary Assembly 54775 na G493DRAFT_scaffold00037.37 unplaced-scaffold na na AUCV01000043.1 = NZ_AUCV01000043.1 Primary Assembly 54311 na G493DRAFT_scaffold00038.38 unplaced-scaffold na na AUCV01000044.1 = NZ_AUCV01000044.1 Primary Assembly 52932 na G493DRAFT_scaffold00039.39 unplaced-scaffold na na AUCV01000045.1 = NZ_AUCV01000045.1 Primary Assembly 52151 na G493DRAFT_scaffold00040.40 unplaced-scaffold na na AUCV01000046.1 = NZ_AUCV01000046.1 Primary Assembly 51598 na G493DRAFT_scaffold00041.41 unplaced-scaffold na na AUCV01000047.1 = NZ_AUCV01000047.1 Primary Assembly 51495 na G493DRAFT_scaffold00043.43 unplaced-scaffold na na AUCV01000050.1 = NZ_AUCV01000050.1 Primary Assembly 43535 na G493DRAFT_scaffold00044.44 unplaced-scaffold na na AUCV01000051.1 = NZ_AUCV01000051.1 Primary Assembly 41787 na G493DRAFT_scaffold00045.45 unplaced-scaffold na na AUCV01000052.1 = NZ_AUCV01000052.1 Primary Assembly 39112 na G493DRAFT_scaffold00046.46 unplaced-scaffold na na AUCV01000053.1 = NZ_AUCV01000053.1 Primary Assembly 38437 na G493DRAFT_scaffold00047.47 unplaced-scaffold na na AUCV01000054.1 = NZ_AUCV01000054.1 Primary Assembly 36858 na G493DRAFT_scaffold00048.48 unplaced-scaffold na na AUCV01000055.1 = NZ_AUCV01000055.1 Primary Assembly 35932 na G493DRAFT_scaffold00049.49 unplaced-scaffold na na AUCV01000056.1 = NZ_AUCV01000056.1 Primary Assembly 35553 na G493DRAFT_scaffold00050.50 unplaced-scaffold na na AUCV01000057.1 = NZ_AUCV01000057.1 Primary Assembly 34915 na G493DRAFT_scaffold00051.51 unplaced-scaffold na na AUCV01000058.1 = NZ_AUCV01000058.1 Primary Assembly 34128 na G493DRAFT_scaffold00052.52 unplaced-scaffold na na AUCV01000059.1 = NZ_AUCV01000059.1 Primary Assembly 32932 na G493DRAFT_scaffold00053.53 unplaced-scaffold na na AUCV01000060.1 = NZ_AUCV01000060.1 Primary Assembly 30361 na G493DRAFT_scaffold00054.54 unplaced-scaffold na na AUCV01000061.1 = NZ_AUCV01000061.1 Primary Assembly 30366 na G493DRAFT_scaffold00055.55 unplaced-scaffold na na AUCV01000062.1 = NZ_AUCV01000062.1 Primary Assembly 29908 na G493DRAFT_scaffold00056.56 unplaced-scaffold na na AUCV01000063.1 = NZ_AUCV01000063.1 Primary Assembly 27646 na G493DRAFT_scaffold00058.58 unplaced-scaffold na na AUCV01000066.1 = NZ_AUCV01000066.1 Primary Assembly 26778 na G493DRAFT_scaffold00059.59 unplaced-scaffold na na AUCV01000067.1 = NZ_AUCV01000067.1 Primary Assembly 24950 na G493DRAFT_scaffold00060.60 unplaced-scaffold na na AUCV01000068.1 = NZ_AUCV01000068.1 Primary Assembly 21334 na G493DRAFT_scaffold00061.61 unplaced-scaffold na na AUCV01000069.1 = NZ_AUCV01000069.1 Primary Assembly 20466 na G493DRAFT_scaffold00062.62 unplaced-scaffold na na AUCV01000070.1 = NZ_AUCV01000070.1 Primary Assembly 16238 na G493DRAFT_scaffold00063.63 unplaced-scaffold na na AUCV01000071.1 = NZ_AUCV01000071.1 Primary Assembly 16170 na G493DRAFT_scaffold00064.64 unplaced-scaffold na na AUCV01000072.1 = NZ_AUCV01000072.1 Primary Assembly 13411 na G493DRAFT_scaffold00065.65 unplaced-scaffold na na AUCV01000073.1 = NZ_AUCV01000073.1 Primary Assembly 12027 na G493DRAFT_scaffold00066.66 unplaced-scaffold na na AUCV01000074.1 = NZ_AUCV01000074.1 Primary Assembly 10354 na G493DRAFT_scaffold00067.67 unplaced-scaffold na na AUCV01000075.1 = NZ_AUCV01000075.1 Primary Assembly 9326 na G493DRAFT_scaffold00068.68 unplaced-scaffold na na AUCV01000076.1 = NZ_AUCV01000076.1 Primary Assembly 8664 na G493DRAFT_scaffold00069.69 unplaced-scaffold na na AUCV01000077.1 = NZ_AUCV01000077.1 Primary Assembly 8571 na G493DRAFT_scaffold00070.70 unplaced-scaffold na na AUCV01000078.1 = NZ_AUCV01000078.1 Primary Assembly 8456 na G493DRAFT_scaffold00071.71 unplaced-scaffold na na AUCV01000079.1 = NZ_AUCV01000079.1 Primary Assembly 6719 na G493DRAFT_scaffold00072.72 unplaced-scaffold na na AUCV01000080.1 = NZ_AUCV01000080.1 Primary Assembly 6695 na G493DRAFT_scaffold00074.74 unplaced-scaffold na na AUCV01000083.1 = NZ_AUCV01000083.1 Primary Assembly 6511 na G493DRAFT_scaffold00075.75 unplaced-scaffold na na AUCV01000084.1 = NZ_AUCV01000084.1 Primary Assembly 6447 na G493DRAFT_scaffold00076.76 unplaced-scaffold na na AUCV01000085.1 = NZ_AUCV01000085.1 Primary Assembly 6311 na G493DRAFT_scaffold00077.77 unplaced-scaffold na na AUCV01000086.1 = NZ_AUCV01000086.1 Primary Assembly 6274 na G493DRAFT_scaffold00078.78 unplaced-scaffold na na AUCV01000087.1 = NZ_AUCV01000087.1 Primary Assembly 6269 na G493DRAFT_scaffold00079.79 unplaced-scaffold na na AUCV01000088.1 = NZ_AUCV01000088.1 Primary Assembly 6245 na G493DRAFT_scaffold00080.80 unplaced-scaffold na na AUCV01000089.1 = NZ_AUCV01000089.1 Primary Assembly 6080 na G493DRAFT_scaffold00082.82 unplaced-scaffold na na AUCV01000092.1 = NZ_AUCV01000092.1 Primary Assembly 5059 na G493DRAFT_scaffold00083.83 unplaced-scaffold na na AUCV01000093.1 = NZ_AUCV01000093.1 Primary Assembly 5004 na G493DRAFT_scaffold00085.85 unplaced-scaffold na na AUCV01000096.1 = NZ_AUCV01000096.1 Primary Assembly 4802 na G493DRAFT_scaffold00086.86 unplaced-scaffold na na AUCV01000097.1 = NZ_AUCV01000097.1 Primary Assembly 4602 na G493DRAFT_scaffold00087.87 unplaced-scaffold na na AUCV01000098.1 = NZ_AUCV01000098.1 Primary Assembly 4450 na G493DRAFT_scaffold00088.88 unplaced-scaffold na na AUCV01000099.1 = NZ_AUCV01000099.1 Primary Assembly 4376 na G493DRAFT_scaffold00089.89 unplaced-scaffold na na AUCV01000100.1 = NZ_AUCV01000100.1 Primary Assembly 3429 na G493DRAFT_scaffold00090.90 unplaced-scaffold na na AUCV01000101.1 = NZ_AUCV01000101.1 Primary Assembly 3455 na G493DRAFT_scaffold00091.91 unplaced-scaffold na na AUCV01000102.1 = NZ_AUCV01000102.1 Primary Assembly 3378 na G493DRAFT_scaffold00092.92 unplaced-scaffold na na AUCV01000103.1 = NZ_AUCV01000103.1 Primary Assembly 3322 na G493DRAFT_scaffold00093.93 unplaced-scaffold na na AUCV01000104.1 = NZ_AUCV01000104.1 Primary Assembly 3203 na G493DRAFT_scaffold00094.94 unplaced-scaffold na na AUCV01000105.1 = NZ_AUCV01000105.1 Primary Assembly 3164 na G493DRAFT_scaffold00095.95 unplaced-scaffold na na AUCV01000106.1 = NZ_AUCV01000106.1 Primary Assembly 2840 na G493DRAFT_scaffold00096.96 unplaced-scaffold na na AUCV01000107.1 = NZ_AUCV01000107.1 Primary Assembly 2797 na G493DRAFT_scaffold00097.97 unplaced-scaffold na na AUCV01000108.1 = NZ_AUCV01000108.1 Primary Assembly 2778 na G493DRAFT_scaffold00098.98 unplaced-scaffold na na AUCV01000109.1 = NZ_AUCV01000109.1 Primary Assembly 2523 na G493DRAFT_scaffold00099.99 unplaced-scaffold na na AUCV01000110.1 = NZ_AUCV01000110.1 Primary Assembly 2359 na G493DRAFT_scaffold00100.100 unplaced-scaffold na na AUCV01000111.1 = NZ_AUCV01000111.1 Primary Assembly 2051 na G493DRAFT_scaffold00101.101 unplaced-scaffold na na AUCV01000112.1 = NZ_AUCV01000112.1 Primary Assembly 1981 na G493DRAFT_scaffold00102.102 unplaced-scaffold na na AUCV01000113.1 = NZ_AUCV01000113.1 Primary Assembly 1913 na G493DRAFT_scaffold00103.103 unplaced-scaffold na na AUCV01000114.1 = NZ_AUCV01000114.1 Primary Assembly 1818 na G493DRAFT_scaffold00104.104 unplaced-scaffold na na AUCV01000115.1 = NZ_AUCV01000115.1 Primary Assembly 1774 na G493DRAFT_scaffold00105.105 unplaced-scaffold na na AUCV01000116.1 = NZ_AUCV01000116.1 Primary Assembly 1703 na G493DRAFT_scaffold00106.106 unplaced-scaffold na na AUCV01000117.1 = NZ_AUCV01000117.1 Primary Assembly 1679 na G493DRAFT_scaffold00107.107 unplaced-scaffold na na AUCV01000118.1 = NZ_AUCV01000118.1 Primary Assembly 1653 na G493DRAFT_scaffold00108.108 unplaced-scaffold na na AUCV01000119.1 = NZ_AUCV01000119.1 Primary Assembly 1626 na G493DRAFT_scaffold00109.109 unplaced-scaffold na na AUCV01000120.1 = NZ_AUCV01000120.1 Primary Assembly 1616 na G493DRAFT_scaffold00110.110 unplaced-scaffold na na AUCV01000121.1 = NZ_AUCV01000121.1 Primary Assembly 1507 na G493DRAFT_scaffold00111.111 unplaced-scaffold na na AUCV01000122.1 = NZ_AUCV01000122.1 Primary Assembly 1435 na G493DRAFT_scaffold00112.112 unplaced-scaffold na na AUCV01000123.1 = NZ_AUCV01000123.1 Primary Assembly 1391 na G493DRAFT_scaffold00113.113 unplaced-scaffold na na AUCV01000124.1 = NZ_AUCV01000124.1 Primary Assembly 1381 na G493DRAFT_scaffold00114.114 unplaced-scaffold na na AUCV01000125.1 = NZ_AUCV01000125.1 Primary Assembly 1373 na G493DRAFT_scaffold00115.115 unplaced-scaffold na na AUCV01000126.1 = NZ_AUCV01000126.1 Primary Assembly 1247 na G493DRAFT_scaffold00116.116 unplaced-scaffold na na AUCV01000127.1 = NZ_AUCV01000127.1 Primary Assembly 1232 na G493DRAFT_scaffold00117.117 unplaced-scaffold na na AUCV01000128.1 = NZ_AUCV01000128.1 Primary Assembly 1214 na G493DRAFT_scaffold00118.118 unplaced-scaffold na na AUCV01000129.1 = NZ_AUCV01000129.1 Primary Assembly 1177 na G493DRAFT_scaffold00119.119 unplaced-scaffold na na AUCV01000130.1 = NZ_AUCV01000130.1 Primary Assembly 1137 na G493DRAFT_scaffold00120.120 unplaced-scaffold na na AUCV01000131.1 = NZ_AUCV01000131.1 Primary Assembly 1130 na G493DRAFT_scaffold00121.121 unplaced-scaffold na na AUCV01000132.1 = NZ_AUCV01000132.1 Primary Assembly 1119 na G493DRAFT_scaffold00122.122 unplaced-scaffold na na AUCV01000133.1 = NZ_AUCV01000133.1 Primary Assembly 1103 na G493DRAFT_scaffold00123.123 unplaced-scaffold na na AUCV01000134.1 = NZ_AUCV01000134.1 Primary Assembly 1073 na G493DRAFT_scaffold00124.124 unplaced-scaffold na na AUCV01000135.1 = NZ_AUCV01000135.1 Primary Assembly 1000 na G493DRAFT_scaffold00006.6 unplaced-scaffold na na KE386993.1 = NZ_KE386993.1 Primary Assembly 198698 na G493DRAFT_scaffold00008.8 unplaced-scaffold na na KE386994.1 = NZ_KE386994.1 Primary Assembly 186615 na G493DRAFT_scaffold00009.9 unplaced-scaffold na na KE386995.1 = NZ_KE386995.1 Primary Assembly 154861 na G493DRAFT_scaffold00012.12 unplaced-scaffold na na KE386996.1 = NZ_KE386996.1 Primary Assembly 132847 na G493DRAFT_scaffold00019.19 unplaced-scaffold na na KE386997.1 = NZ_KE386997.1 Primary Assembly 102040 na G493DRAFT_scaffold00032.32 unplaced-scaffold na na KE386998.1 = NZ_KE386998.1 Primary Assembly 60264 na G493DRAFT_scaffold00042.42 unplaced-scaffold na na KE386999.1 = NZ_KE386999.1 Primary Assembly 50989 na G493DRAFT_scaffold00057.57 unplaced-scaffold na na KE387000.1 = NZ_KE387000.1 Primary Assembly 27160 na G493DRAFT_scaffold00073.73 unplaced-scaffold na na KE387001.1 = NZ_KE387001.1 Primary Assembly 6401 na G493DRAFT_scaffold00081.81 unplaced-scaffold na na KE387002.1 = NZ_KE387002.1 Primary Assembly 7183 na G493DRAFT_scaffold00084.84 unplaced-scaffold na na KE387003.1 = NZ_KE387003.1 Primary Assembly 4969 na