# Assembly name: ASM47423v1 # Organism name: Halarchaeum acidiphilum MH1-52-1 (euryarchaeotes) # Infraspecific name: strain=JCM 16109 # Taxid: 1261545 # BioSample: SAMD00036764 # BioProject: PRJDB708 # Submitter: Japan Agency for Marine-Earth Science and Technology # Date: 2013-09-13 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: BATA01 # Assembly method: CLC De novo assembly v. 6.01 # Genome coverage: 78x # Sequencing technology: Ion torrent # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_000474235.1 # RefSeq assembly accession: GCF_000474235.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_000474245.1 GCF_000474245.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name BATA01000001.1 unplaced-scaffold na na BATA01000001.1 = NZ_BATA01000001.1 Primary Assembly 98563 na BATA01000002.1 unplaced-scaffold na na BATA01000002.1 = NZ_BATA01000002.1 Primary Assembly 90274 na BATA01000003.1 unplaced-scaffold na na BATA01000003.1 = NZ_BATA01000003.1 Primary Assembly 89171 na BATA01000004.1 unplaced-scaffold na na BATA01000004.1 = NZ_BATA01000004.1 Primary Assembly 79608 na BATA01000005.1 unplaced-scaffold na na BATA01000005.1 = NZ_BATA01000005.1 Primary Assembly 63103 na BATA01000006.1 unplaced-scaffold na na BATA01000006.1 = NZ_BATA01000006.1 Primary Assembly 52954 na BATA01000007.1 unplaced-scaffold na na BATA01000007.1 = NZ_BATA01000007.1 Primary Assembly 52901 na BATA01000008.1 unplaced-scaffold na na BATA01000008.1 = NZ_BATA01000008.1 Primary Assembly 52808 na BATA01000009.1 unplaced-scaffold na na BATA01000009.1 = NZ_BATA01000009.1 Primary Assembly 52278 na BATA01000010.1 unplaced-scaffold na na BATA01000010.1 = NZ_BATA01000010.1 Primary Assembly 49968 na BATA01000011.1 unplaced-scaffold na na BATA01000011.1 = NZ_BATA01000011.1 Primary Assembly 49218 na BATA01000012.1 unplaced-scaffold na na BATA01000012.1 = NZ_BATA01000012.1 Primary Assembly 46881 na BATA01000013.1 unplaced-scaffold na na BATA01000013.1 = NZ_BATA01000013.1 Primary Assembly 43586 na BATA01000014.1 unplaced-scaffold na na BATA01000014.1 = NZ_BATA01000014.1 Primary Assembly 42937 na BATA01000015.1 unplaced-scaffold na na BATA01000015.1 = NZ_BATA01000015.1 Primary Assembly 41575 na BATA01000016.1 unplaced-scaffold na na BATA01000016.1 = NZ_BATA01000016.1 Primary Assembly 40897 na BATA01000017.1 unplaced-scaffold na na BATA01000017.1 = NZ_BATA01000017.1 Primary Assembly 40498 na BATA01000018.1 unplaced-scaffold na na BATA01000018.1 = NZ_BATA01000018.1 Primary Assembly 36514 na BATA01000019.1 unplaced-scaffold na na BATA01000019.1 = NZ_BATA01000019.1 Primary Assembly 35245 na BATA01000020.1 unplaced-scaffold na na BATA01000020.1 = NZ_BATA01000020.1 Primary Assembly 35179 na BATA01000021.1 unplaced-scaffold na na BATA01000021.1 = NZ_BATA01000021.1 Primary Assembly 35126 na BATA01000022.1 unplaced-scaffold na na BATA01000022.1 = NZ_BATA01000022.1 Primary Assembly 34704 na BATA01000023.1 unplaced-scaffold na na BATA01000023.1 = NZ_BATA01000023.1 Primary Assembly 33014 na BATA01000024.1 unplaced-scaffold na na BATA01000024.1 = NZ_BATA01000024.1 Primary Assembly 32466 na BATA01000025.1 unplaced-scaffold na na BATA01000025.1 = NZ_BATA01000025.1 Primary Assembly 31199 na BATA01000026.1 unplaced-scaffold na na BATA01000026.1 = NZ_BATA01000026.1 Primary Assembly 30977 na BATA01000027.1 unplaced-scaffold na na BATA01000027.1 = NZ_BATA01000027.1 Primary Assembly 29538 na BATA01000028.1 unplaced-scaffold na na BATA01000028.1 = NZ_BATA01000028.1 Primary Assembly 29181 na BATA01000029.1 unplaced-scaffold na na BATA01000029.1 = NZ_BATA01000029.1 Primary Assembly 29116 na BATA01000030.1 unplaced-scaffold na na BATA01000030.1 = NZ_BATA01000030.1 Primary Assembly 28260 na BATA01000031.1 unplaced-scaffold na na BATA01000031.1 = NZ_BATA01000031.1 Primary Assembly 27096 na BATA01000032.1 unplaced-scaffold na na BATA01000032.1 = NZ_BATA01000032.1 Primary Assembly 26594 na BATA01000033.1 unplaced-scaffold na na BATA01000033.1 = NZ_BATA01000033.1 Primary Assembly 25852 na BATA01000034.1 unplaced-scaffold na na BATA01000034.1 = NZ_BATA01000034.1 Primary Assembly 25810 na BATA01000035.1 unplaced-scaffold na na BATA01000035.1 = NZ_BATA01000035.1 Primary Assembly 25618 na BATA01000036.1 unplaced-scaffold na na BATA01000036.1 = NZ_BATA01000036.1 Primary Assembly 25599 na BATA01000037.1 unplaced-scaffold na na BATA01000037.1 = NZ_BATA01000037.1 Primary Assembly 24910 na BATA01000038.1 unplaced-scaffold na na BATA01000038.1 = NZ_BATA01000038.1 Primary Assembly 24271 na BATA01000039.1 unplaced-scaffold na na BATA01000039.1 = NZ_BATA01000039.1 Primary Assembly 23708 na BATA01000040.1 unplaced-scaffold na na BATA01000040.1 = NZ_BATA01000040.1 Primary Assembly 23475 na BATA01000041.1 unplaced-scaffold na na BATA01000041.1 = NZ_BATA01000041.1 Primary Assembly 21380 na BATA01000042.1 unplaced-scaffold na na BATA01000042.1 = NZ_BATA01000042.1 Primary Assembly 21359 na BATA01000043.1 unplaced-scaffold na na BATA01000043.1 = NZ_BATA01000043.1 Primary Assembly 21213 na BATA01000044.1 unplaced-scaffold na na BATA01000044.1 = NZ_BATA01000044.1 Primary Assembly 21208 na BATA01000045.1 unplaced-scaffold na na BATA01000045.1 = NZ_BATA01000045.1 Primary Assembly 21160 na BATA01000046.1 unplaced-scaffold na na BATA01000046.1 = NZ_BATA01000046.1 Primary Assembly 20735 na BATA01000047.1 unplaced-scaffold na na BATA01000047.1 = NZ_BATA01000047.1 Primary Assembly 20379 na BATA01000048.1 unplaced-scaffold na na BATA01000048.1 = NZ_BATA01000048.1 Primary Assembly 19819 na BATA01000049.1 unplaced-scaffold na na BATA01000049.1 = NZ_BATA01000049.1 Primary Assembly 19818 na BATA01000050.1 unplaced-scaffold na na BATA01000050.1 = NZ_BATA01000050.1 Primary Assembly 19572 na BATA01000051.1 unplaced-scaffold na na BATA01000051.1 = NZ_BATA01000051.1 Primary Assembly 19253 na BATA01000052.1 unplaced-scaffold na na BATA01000052.1 = NZ_BATA01000052.1 Primary Assembly 18698 na BATA01000053.1 unplaced-scaffold na na BATA01000053.1 = NZ_BATA01000053.1 Primary Assembly 18411 na BATA01000054.1 unplaced-scaffold na na BATA01000054.1 = NZ_BATA01000054.1 Primary Assembly 18307 na BATA01000055.1 unplaced-scaffold na na BATA01000055.1 = NZ_BATA01000055.1 Primary Assembly 18275 na BATA01000056.1 unplaced-scaffold na na BATA01000056.1 = NZ_BATA01000056.1 Primary Assembly 17576 na BATA01000057.1 unplaced-scaffold na na BATA01000057.1 = NZ_BATA01000057.1 Primary Assembly 17456 na BATA01000058.1 unplaced-scaffold na na BATA01000058.1 = NZ_BATA01000058.1 Primary Assembly 16758 na BATA01000059.1 unplaced-scaffold na na BATA01000059.1 = NZ_BATA01000059.1 Primary Assembly 16337 na BATA01000060.1 unplaced-scaffold na na BATA01000060.1 = NZ_BATA01000060.1 Primary Assembly 16204 na BATA01000061.1 unplaced-scaffold na na BATA01000061.1 = NZ_BATA01000061.1 Primary Assembly 15880 na BATA01000062.1 unplaced-scaffold na na BATA01000062.1 = NZ_BATA01000062.1 Primary Assembly 15584 na BATA01000063.1 unplaced-scaffold na na BATA01000063.1 = NZ_BATA01000063.1 Primary Assembly 14831 na BATA01000064.1 unplaced-scaffold na na BATA01000064.1 = NZ_BATA01000064.1 Primary Assembly 14741 na BATA01000065.1 unplaced-scaffold na na BATA01000065.1 = NZ_BATA01000065.1 Primary Assembly 14403 na BATA01000066.1 unplaced-scaffold na na BATA01000066.1 = NZ_BATA01000066.1 Primary Assembly 13823 na BATA01000067.1 unplaced-scaffold na na BATA01000067.1 = NZ_BATA01000067.1 Primary Assembly 13748 na BATA01000068.1 unplaced-scaffold na na BATA01000068.1 = NZ_BATA01000068.1 Primary Assembly 13690 na BATA01000069.1 unplaced-scaffold na na BATA01000069.1 = NZ_BATA01000069.1 Primary Assembly 13359 na BATA01000070.1 unplaced-scaffold na na BATA01000070.1 = NZ_BATA01000070.1 Primary Assembly 13272 na BATA01000071.1 unplaced-scaffold na na BATA01000071.1 = NZ_BATA01000071.1 Primary Assembly 12840 na BATA01000072.1 unplaced-scaffold na na BATA01000072.1 = NZ_BATA01000072.1 Primary Assembly 12174 na BATA01000073.1 unplaced-scaffold na na BATA01000073.1 = NZ_BATA01000073.1 Primary Assembly 12079 na BATA01000074.1 unplaced-scaffold na na BATA01000074.1 = NZ_BATA01000074.1 Primary Assembly 12076 na BATA01000075.1 unplaced-scaffold na na BATA01000075.1 = NZ_BATA01000075.1 Primary Assembly 12025 na BATA01000076.1 unplaced-scaffold na na BATA01000076.1 = NZ_BATA01000076.1 Primary Assembly 11866 na BATA01000077.1 unplaced-scaffold na na BATA01000077.1 = NZ_BATA01000077.1 Primary Assembly 11547 na BATA01000078.1 unplaced-scaffold na na BATA01000078.1 = NZ_BATA01000078.1 Primary Assembly 11503 na BATA01000079.1 unplaced-scaffold na na BATA01000079.1 = NZ_BATA01000079.1 Primary Assembly 11372 na BATA01000080.1 unplaced-scaffold na na BATA01000080.1 = NZ_BATA01000080.1 Primary Assembly 11009 na BATA01000081.1 unplaced-scaffold na na BATA01000081.1 = NZ_BATA01000081.1 Primary Assembly 10914 na BATA01000082.1 unplaced-scaffold na na BATA01000082.1 = NZ_BATA01000082.1 Primary Assembly 10904 na BATA01000083.1 unplaced-scaffold na na BATA01000083.1 = NZ_BATA01000083.1 Primary Assembly 10243 na BATA01000084.1 unplaced-scaffold na na BATA01000084.1 = NZ_BATA01000084.1 Primary Assembly 9976 na BATA01000085.1 unplaced-scaffold na na BATA01000085.1 = NZ_BATA01000085.1 Primary Assembly 9560 na BATA01000086.1 unplaced-scaffold na na BATA01000086.1 = NZ_BATA01000086.1 Primary Assembly 9545 na BATA01000087.1 unplaced-scaffold na na BATA01000087.1 = NZ_BATA01000087.1 Primary Assembly 9522 na BATA01000088.1 unplaced-scaffold na na BATA01000088.1 = NZ_BATA01000088.1 Primary Assembly 9458 na BATA01000089.1 unplaced-scaffold na na BATA01000089.1 = NZ_BATA01000089.1 Primary Assembly 9059 na BATA01000090.1 unplaced-scaffold na na BATA01000090.1 = NZ_BATA01000090.1 Primary Assembly 8947 na BATA01000091.1 unplaced-scaffold na na BATA01000091.1 = NZ_BATA01000091.1 Primary Assembly 8653 na BATA01000092.1 unplaced-scaffold na na BATA01000092.1 = NZ_BATA01000092.1 Primary Assembly 8443 na BATA01000093.1 unplaced-scaffold na na BATA01000093.1 = NZ_BATA01000093.1 Primary Assembly 8244 na BATA01000094.1 unplaced-scaffold na na BATA01000094.1 = NZ_BATA01000094.1 Primary Assembly 8040 na BATA01000095.1 unplaced-scaffold na na BATA01000095.1 = NZ_BATA01000095.1 Primary Assembly 7931 na BATA01000096.1 unplaced-scaffold na na BATA01000096.1 = NZ_BATA01000096.1 Primary Assembly 7383 na BATA01000097.1 unplaced-scaffold na na BATA01000097.1 = NZ_BATA01000097.1 Primary Assembly 6871 na BATA01000098.1 unplaced-scaffold na na BATA01000098.1 = NZ_BATA01000098.1 Primary Assembly 6762 na BATA01000099.1 unplaced-scaffold na na BATA01000099.1 = NZ_BATA01000099.1 Primary Assembly 6617 na BATA01000100.1 unplaced-scaffold na na BATA01000100.1 = NZ_BATA01000100.1 Primary Assembly 6101 na BATA01000101.1 unplaced-scaffold na na BATA01000101.1 = NZ_BATA01000101.1 Primary Assembly 4799 na BATA01000102.1 unplaced-scaffold na na BATA01000102.1 = NZ_BATA01000102.1 Primary Assembly 4768 na BATA01000103.1 unplaced-scaffold na na BATA01000103.1 = NZ_BATA01000103.1 Primary Assembly 4710 na BATA01000104.1 unplaced-scaffold na na BATA01000104.1 = NZ_BATA01000104.1 Primary Assembly 4618 na BATA01000105.1 unplaced-scaffold na na BATA01000105.1 = NZ_BATA01000105.1 Primary Assembly 4602 na BATA01000106.1 unplaced-scaffold na na BATA01000106.1 = NZ_BATA01000106.1 Primary Assembly 4387 na BATA01000107.1 unplaced-scaffold na na BATA01000107.1 = NZ_BATA01000107.1 Primary Assembly 4363 na BATA01000108.1 unplaced-scaffold na na BATA01000108.1 = NZ_BATA01000108.1 Primary Assembly 4335 na BATA01000109.1 unplaced-scaffold na na BATA01000109.1 = NZ_BATA01000109.1 Primary Assembly 4267 na BATA01000110.1 unplaced-scaffold na na BATA01000110.1 = NZ_BATA01000110.1 Primary Assembly 4242 na BATA01000111.1 unplaced-scaffold na na BATA01000111.1 = NZ_BATA01000111.1 Primary Assembly 4123 na BATA01000112.1 unplaced-scaffold na na BATA01000112.1 = NZ_BATA01000112.1 Primary Assembly 3852 na BATA01000113.1 unplaced-scaffold na na BATA01000113.1 = NZ_BATA01000113.1 Primary Assembly 3840 na BATA01000114.1 unplaced-scaffold na na BATA01000114.1 = NZ_BATA01000114.1 Primary Assembly 3816 na BATA01000115.1 unplaced-scaffold na na BATA01000115.1 = NZ_BATA01000115.1 Primary Assembly 3617 na BATA01000116.1 unplaced-scaffold na na BATA01000116.1 = NZ_BATA01000116.1 Primary Assembly 3528 na BATA01000117.1 unplaced-scaffold na na BATA01000117.1 = NZ_BATA01000117.1 Primary Assembly 3453 na BATA01000118.1 unplaced-scaffold na na BATA01000118.1 = NZ_BATA01000118.1 Primary Assembly 3417 na BATA01000119.1 unplaced-scaffold na na BATA01000119.1 = NZ_BATA01000119.1 Primary Assembly 3286 na BATA01000120.1 unplaced-scaffold na na BATA01000120.1 = NZ_BATA01000120.1 Primary Assembly 3243 na BATA01000121.1 unplaced-scaffold na na BATA01000121.1 = NZ_BATA01000121.1 Primary Assembly 3242 na BATA01000122.1 unplaced-scaffold na na BATA01000122.1 = NZ_BATA01000122.1 Primary Assembly 3150 na BATA01000123.1 unplaced-scaffold na na BATA01000123.1 = NZ_BATA01000123.1 Primary Assembly 3053 na BATA01000124.1 unplaced-scaffold na na BATA01000124.1 = NZ_BATA01000124.1 Primary Assembly 2956 na BATA01000125.1 unplaced-scaffold na na BATA01000125.1 = NZ_BATA01000125.1 Primary Assembly 2762 na BATA01000126.1 unplaced-scaffold na na BATA01000126.1 = NZ_BATA01000126.1 Primary Assembly 2730 na BATA01000127.1 unplaced-scaffold na na BATA01000127.1 = NZ_BATA01000127.1 Primary Assembly 2663 na BATA01000128.1 unplaced-scaffold na na BATA01000128.1 = NZ_BATA01000128.1 Primary Assembly 2658 na BATA01000129.1 unplaced-scaffold na na BATA01000129.1 = NZ_BATA01000129.1 Primary Assembly 2497 na BATA01000130.1 unplaced-scaffold na na BATA01000130.1 = NZ_BATA01000130.1 Primary Assembly 2462 na BATA01000131.1 unplaced-scaffold na na BATA01000131.1 = NZ_BATA01000131.1 Primary Assembly 2461 na BATA01000132.1 unplaced-scaffold na na BATA01000132.1 = NZ_BATA01000132.1 Primary Assembly 2228 na BATA01000133.1 unplaced-scaffold na na BATA01000133.1 = NZ_BATA01000133.1 Primary Assembly 2047 na BATA01000134.1 unplaced-scaffold na na BATA01000134.1 = NZ_BATA01000134.1 Primary Assembly 2039 na BATA01000135.1 unplaced-scaffold na na BATA01000135.1 = NZ_BATA01000135.1 Primary Assembly 1776 na BATA01000136.1 unplaced-scaffold na na BATA01000136.1 = NZ_BATA01000136.1 Primary Assembly 1761 na BATA01000137.1 unplaced-scaffold na na BATA01000137.1 = NZ_BATA01000137.1 Primary Assembly 1682 na BATA01000138.1 unplaced-scaffold na na BATA01000138.1 = NZ_BATA01000138.1 Primary Assembly 1605 na BATA01000139.1 unplaced-scaffold na na BATA01000139.1 = NZ_BATA01000139.1 Primary Assembly 1573 na BATA01000140.1 unplaced-scaffold na na BATA01000140.1 = NZ_BATA01000140.1 Primary Assembly 1544 na BATA01000141.1 unplaced-scaffold na na BATA01000141.1 = NZ_BATA01000141.1 Primary Assembly 1402 na BATA01000142.1 unplaced-scaffold na na BATA01000142.1 = NZ_BATA01000142.1 Primary Assembly 1363 na BATA01000143.1 unplaced-scaffold na na BATA01000143.1 = NZ_BATA01000143.1 Primary Assembly 1250 na BATA01000144.1 unplaced-scaffold na na BATA01000144.1 = NZ_BATA01000144.1 Primary Assembly 1244 na BATA01000145.1 unplaced-scaffold na na BATA01000145.1 = NZ_BATA01000145.1 Primary Assembly 1203 na BATA01000146.1 unplaced-scaffold na na BATA01000146.1 = NZ_BATA01000146.1 Primary Assembly 1154 na BATA01000147.1 unplaced-scaffold na na BATA01000147.1 = NZ_BATA01000147.1 Primary Assembly 1147 na BATA01000148.1 unplaced-scaffold na na BATA01000148.1 = NZ_BATA01000148.1 Primary Assembly 1144 na BATA01000149.1 unplaced-scaffold na na BATA01000149.1 = NZ_BATA01000149.1 Primary Assembly 995 na BATA01000150.1 unplaced-scaffold na na BATA01000150.1 = NZ_BATA01000150.1 Primary Assembly 955 na BATA01000151.1 unplaced-scaffold na na BATA01000151.1 = NZ_BATA01000151.1 Primary Assembly 926 na BATA01000152.1 unplaced-scaffold na na BATA01000152.1 = NZ_BATA01000152.1 Primary Assembly 694 na BATA01000153.1 unplaced-scaffold na na BATA01000153.1 = NZ_BATA01000153.1 Primary Assembly 694 na BATA01000154.1 unplaced-scaffold na na BATA01000154.1 = NZ_BATA01000154.1 Primary Assembly 678 na BATA01000155.1 unplaced-scaffold na na BATA01000155.1 = NZ_BATA01000155.1 Primary Assembly 663 na BATA01000156.1 unplaced-scaffold na na BATA01000156.1 = NZ_BATA01000156.1 Primary Assembly 629 na BATA01000157.1 unplaced-scaffold na na BATA01000157.1 = NZ_BATA01000157.1 Primary Assembly 607 na BATA01000158.1 unplaced-scaffold na na BATA01000158.1 = NZ_BATA01000158.1 Primary Assembly 593 na BATA01000159.1 unplaced-scaffold na na BATA01000159.1 = NZ_BATA01000159.1 Primary Assembly 593 na BATA01000160.1 unplaced-scaffold na na BATA01000160.1 = NZ_BATA01000160.1 Primary Assembly 584 na BATA01000161.1 unplaced-scaffold na na BATA01000161.1 = NZ_BATA01000161.1 Primary Assembly 581 na BATA01000162.1 unplaced-scaffold na na BATA01000162.1 = NZ_BATA01000162.1 Primary Assembly 581 na BATA01000163.1 unplaced-scaffold na na BATA01000163.1 = NZ_BATA01000163.1 Primary Assembly 520 na BATA01000164.1 unplaced-scaffold na na BATA01000164.1 = NZ_BATA01000164.1 Primary Assembly 518 na BATA01000165.1 unplaced-scaffold na na BATA01000165.1 = NZ_BATA01000165.1 Primary Assembly 516 na