# Assembly name: ASM51311v1 # Organism name: Halalkalibacter hemicellulosilyticusJCM 9152 (firmicutes) # Infraspecific name: strain=JCM 9152 # Taxid: 1236971 # BioSample: SAMD00000476 # BioProject: PRJDB669 # Submitter: The University of Tokyo # Date: 2013-12-30 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: BAUU01 # Assembly method: Newbler v. 2.8 # Genome coverage: 27.1x # Sequencing technology: Ion PGM # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_000513115.1 # RefSeq assembly accession: GCF_000513115.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_000513125.1 GCF_000513125.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name BAUU01000001.1 unplaced-scaffold na na BAUU01000001.1 = NZ_BAUU01000001.1 Primary Assembly 248465 na BAUU01000002.1 unplaced-scaffold na na BAUU01000002.1 = NZ_BAUU01000002.1 Primary Assembly 197256 na BAUU01000003.1 unplaced-scaffold na na BAUU01000003.1 = NZ_BAUU01000003.1 Primary Assembly 187050 na BAUU01000004.1 unplaced-scaffold na na BAUU01000004.1 = NZ_BAUU01000004.1 Primary Assembly 185300 na BAUU01000005.1 unplaced-scaffold na na BAUU01000005.1 = NZ_BAUU01000005.1 Primary Assembly 176054 na BAUU01000006.1 unplaced-scaffold na na BAUU01000006.1 = NZ_BAUU01000006.1 Primary Assembly 159476 na BAUU01000007.1 unplaced-scaffold na na BAUU01000007.1 = NZ_BAUU01000007.1 Primary Assembly 157910 na BAUU01000008.1 unplaced-scaffold na na BAUU01000008.1 = NZ_BAUU01000008.1 Primary Assembly 152988 na BAUU01000009.1 unplaced-scaffold na na BAUU01000009.1 = NZ_BAUU01000009.1 Primary Assembly 149531 na BAUU01000010.1 unplaced-scaffold na na BAUU01000010.1 = NZ_BAUU01000010.1 Primary Assembly 148034 na BAUU01000011.1 unplaced-scaffold na na BAUU01000011.1 = NZ_BAUU01000011.1 Primary Assembly 145217 na BAUU01000012.1 unplaced-scaffold na na BAUU01000012.1 = NZ_BAUU01000012.1 Primary Assembly 140818 na BAUU01000013.1 unplaced-scaffold na na BAUU01000013.1 = NZ_BAUU01000013.1 Primary Assembly 140211 na BAUU01000014.1 unplaced-scaffold na na BAUU01000014.1 = NZ_BAUU01000014.1 Primary Assembly 128524 na BAUU01000015.1 unplaced-scaffold na na BAUU01000015.1 = NZ_BAUU01000015.1 Primary Assembly 112505 na BAUU01000016.1 unplaced-scaffold na na BAUU01000016.1 = NZ_BAUU01000016.1 Primary Assembly 111851 na BAUU01000017.1 unplaced-scaffold na na BAUU01000017.1 = NZ_BAUU01000017.1 Primary Assembly 110015 na BAUU01000018.1 unplaced-scaffold na na BAUU01000018.1 = NZ_BAUU01000018.1 Primary Assembly 100902 na BAUU01000019.1 unplaced-scaffold na na BAUU01000019.1 = NZ_BAUU01000019.1 Primary Assembly 99037 na BAUU01000020.1 unplaced-scaffold na na BAUU01000020.1 = NZ_BAUU01000020.1 Primary Assembly 97606 na BAUU01000021.1 unplaced-scaffold na na BAUU01000021.1 = NZ_BAUU01000021.1 Primary Assembly 78552 na BAUU01000022.1 unplaced-scaffold na na BAUU01000022.1 = NZ_BAUU01000022.1 Primary Assembly 78030 na BAUU01000023.1 unplaced-scaffold na na BAUU01000023.1 = NZ_BAUU01000023.1 Primary Assembly 75801 na BAUU01000024.1 unplaced-scaffold na na BAUU01000024.1 = NZ_BAUU01000024.1 Primary Assembly 73343 na BAUU01000025.1 unplaced-scaffold na na BAUU01000025.1 = NZ_BAUU01000025.1 Primary Assembly 69351 na BAUU01000026.1 unplaced-scaffold na na BAUU01000026.1 = NZ_BAUU01000026.1 Primary Assembly 67870 na BAUU01000027.1 unplaced-scaffold na na BAUU01000027.1 = NZ_BAUU01000027.1 Primary Assembly 65867 na BAUU01000028.1 unplaced-scaffold na na BAUU01000028.1 = NZ_BAUU01000028.1 Primary Assembly 63260 na BAUU01000029.1 unplaced-scaffold na na BAUU01000029.1 = NZ_BAUU01000029.1 Primary Assembly 60483 na BAUU01000030.1 unplaced-scaffold na na BAUU01000030.1 = NZ_BAUU01000030.1 Primary Assembly 51670 na BAUU01000031.1 unplaced-scaffold na na BAUU01000031.1 = NZ_BAUU01000031.1 Primary Assembly 46614 na BAUU01000032.1 unplaced-scaffold na na BAUU01000032.1 = NZ_BAUU01000032.1 Primary Assembly 45101 na BAUU01000033.1 unplaced-scaffold na na BAUU01000033.1 = NZ_BAUU01000033.1 Primary Assembly 44489 na BAUU01000034.1 unplaced-scaffold na na BAUU01000034.1 = NZ_BAUU01000034.1 Primary Assembly 44484 na BAUU01000035.1 unplaced-scaffold na na BAUU01000035.1 = NZ_BAUU01000035.1 Primary Assembly 40601 na BAUU01000036.1 unplaced-scaffold na na BAUU01000036.1 = NZ_BAUU01000036.1 Primary Assembly 40568 na BAUU01000037.1 unplaced-scaffold na na BAUU01000037.1 = NZ_BAUU01000037.1 Primary Assembly 37791 na BAUU01000038.1 unplaced-scaffold na na BAUU01000038.1 = NZ_BAUU01000038.1 Primary Assembly 37327 na BAUU01000039.1 unplaced-scaffold na na BAUU01000039.1 = NZ_BAUU01000039.1 Primary Assembly 33362 na BAUU01000040.1 unplaced-scaffold na na BAUU01000040.1 = NZ_BAUU01000040.1 Primary Assembly 31884 na BAUU01000041.1 unplaced-scaffold na na BAUU01000041.1 = NZ_BAUU01000041.1 Primary Assembly 31460 na BAUU01000042.1 unplaced-scaffold na na BAUU01000042.1 = NZ_BAUU01000042.1 Primary Assembly 25627 na BAUU01000043.1 unplaced-scaffold na na BAUU01000043.1 = NZ_BAUU01000043.1 Primary Assembly 24003 na BAUU01000044.1 unplaced-scaffold na na BAUU01000044.1 = NZ_BAUU01000044.1 Primary Assembly 23940 na BAUU01000045.1 unplaced-scaffold na na BAUU01000045.1 = NZ_BAUU01000045.1 Primary Assembly 21570 na BAUU01000046.1 unplaced-scaffold na na BAUU01000046.1 = NZ_BAUU01000046.1 Primary Assembly 21206 na BAUU01000047.1 unplaced-scaffold na na BAUU01000047.1 = NZ_BAUU01000047.1 Primary Assembly 20092 na BAUU01000048.1 unplaced-scaffold na na BAUU01000048.1 = NZ_BAUU01000048.1 Primary Assembly 19149 na BAUU01000049.1 unplaced-scaffold na na BAUU01000049.1 = NZ_BAUU01000049.1 Primary Assembly 17649 na BAUU01000050.1 unplaced-scaffold na na BAUU01000050.1 = NZ_BAUU01000050.1 Primary Assembly 17638 na BAUU01000051.1 unplaced-scaffold na na BAUU01000051.1 = NZ_BAUU01000051.1 Primary Assembly 16558 na BAUU01000052.1 unplaced-scaffold na na BAUU01000052.1 = NZ_BAUU01000052.1 Primary Assembly 16380 na BAUU01000053.1 unplaced-scaffold na na BAUU01000053.1 = NZ_BAUU01000053.1 Primary Assembly 15880 na BAUU01000054.1 unplaced-scaffold na na BAUU01000054.1 = NZ_BAUU01000054.1 Primary Assembly 14003 na BAUU01000055.1 unplaced-scaffold na na BAUU01000055.1 = NZ_BAUU01000055.1 Primary Assembly 13389 na BAUU01000056.1 unplaced-scaffold na na BAUU01000056.1 = NZ_BAUU01000056.1 Primary Assembly 12785 na BAUU01000057.1 unplaced-scaffold na na BAUU01000057.1 = NZ_BAUU01000057.1 Primary Assembly 12564 na BAUU01000058.1 unplaced-scaffold na na BAUU01000058.1 = NZ_BAUU01000058.1 Primary Assembly 14855 na BAUU01000059.1 unplaced-scaffold na na BAUU01000059.1 = NZ_BAUU01000059.1 Primary Assembly 11314 na BAUU01000060.1 unplaced-scaffold na na BAUU01000060.1 = NZ_BAUU01000060.1 Primary Assembly 10606 na BAUU01000061.1 unplaced-scaffold na na BAUU01000061.1 = NZ_BAUU01000061.1 Primary Assembly 10119 na BAUU01000062.1 unplaced-scaffold na na BAUU01000062.1 = NZ_BAUU01000062.1 Primary Assembly 9645 na BAUU01000063.1 unplaced-scaffold na na BAUU01000063.1 = NZ_BAUU01000063.1 Primary Assembly 8863 na BAUU01000064.1 unplaced-scaffold na na BAUU01000064.1 = NZ_BAUU01000064.1 Primary Assembly 8293 na BAUU01000065.1 unplaced-scaffold na na BAUU01000065.1 = NZ_BAUU01000065.1 Primary Assembly 7584 na BAUU01000066.1 unplaced-scaffold na na BAUU01000066.1 = NZ_BAUU01000066.1 Primary Assembly 7560 na BAUU01000067.1 unplaced-scaffold na na BAUU01000067.1 = NZ_BAUU01000067.1 Primary Assembly 7194 na BAUU01000068.1 unplaced-scaffold na na BAUU01000068.1 = NZ_BAUU01000068.1 Primary Assembly 5934 na BAUU01000069.1 unplaced-scaffold na na BAUU01000069.1 = NZ_BAUU01000069.1 Primary Assembly 5656 na BAUU01000070.1 unplaced-scaffold na na BAUU01000070.1 = NZ_BAUU01000070.1 Primary Assembly 5000 na BAUU01000071.1 unplaced-scaffold na na BAUU01000071.1 = NZ_BAUU01000071.1 Primary Assembly 4578 na BAUU01000072.1 unplaced-scaffold na na BAUU01000072.1 = NZ_BAUU01000072.1 Primary Assembly 4357 na BAUU01000073.1 unplaced-scaffold na na BAUU01000073.1 = NZ_BAUU01000073.1 Primary Assembly 4257 na BAUU01000074.1 unplaced-scaffold na na BAUU01000074.1 = NZ_BAUU01000074.1 Primary Assembly 4123 na BAUU01000075.1 unplaced-scaffold na na BAUU01000075.1 = NZ_BAUU01000075.1 Primary Assembly 3854 na BAUU01000076.1 unplaced-scaffold na na BAUU01000076.1 = NZ_BAUU01000076.1 Primary Assembly 3332 na BAUU01000077.1 unplaced-scaffold na na BAUU01000077.1 = NZ_BAUU01000077.1 Primary Assembly 3305 na BAUU01000078.1 unplaced-scaffold na na BAUU01000078.1 = NZ_BAUU01000078.1 Primary Assembly 3100 na BAUU01000079.1 unplaced-scaffold na na BAUU01000079.1 = NZ_BAUU01000079.1 Primary Assembly 2822 na BAUU01000080.1 unplaced-scaffold na na BAUU01000080.1 = NZ_BAUU01000080.1 Primary Assembly 2576 na BAUU01000081.1 unplaced-scaffold na na BAUU01000081.1 = NZ_BAUU01000081.1 Primary Assembly 2428 na BAUU01000082.1 unplaced-scaffold na na BAUU01000082.1 = NZ_BAUU01000082.1 Primary Assembly 1899 na BAUU01000083.1 unplaced-scaffold na na BAUU01000083.1 = NZ_BAUU01000083.1 Primary Assembly 1870 na BAUU01000084.1 unplaced-scaffold na na BAUU01000084.1 = NZ_BAUU01000084.1 Primary Assembly 1851 na BAUU01000085.1 unplaced-scaffold na na BAUU01000085.1 = NZ_BAUU01000085.1 Primary Assembly 1775 na BAUU01000086.1 unplaced-scaffold na na BAUU01000086.1 = NZ_BAUU01000086.1 Primary Assembly 1680 na BAUU01000087.1 unplaced-scaffold na na BAUU01000087.1 = NZ_BAUU01000087.1 Primary Assembly 1643 na BAUU01000088.1 unplaced-scaffold na na BAUU01000088.1 = NZ_BAUU01000088.1 Primary Assembly 1621 na BAUU01000089.1 unplaced-scaffold na na BAUU01000089.1 = NZ_BAUU01000089.1 Primary Assembly 1606 na BAUU01000090.1 unplaced-scaffold na na BAUU01000090.1 = NZ_BAUU01000090.1 Primary Assembly 1543 na BAUU01000091.1 unplaced-scaffold na na BAUU01000091.1 = NZ_BAUU01000091.1 Primary Assembly 1452 na BAUU01000092.1 unplaced-scaffold na na BAUU01000092.1 = NZ_BAUU01000092.1 Primary Assembly 1425 na BAUU01000093.1 unplaced-scaffold na na BAUU01000093.1 = NZ_BAUU01000093.1 Primary Assembly 1332 na BAUU01000094.1 unplaced-scaffold na na BAUU01000094.1 = NZ_BAUU01000094.1 Primary Assembly 1197 na BAUU01000095.1 unplaced-scaffold na na BAUU01000095.1 = NZ_BAUU01000095.1 Primary Assembly 1084 na BAUU01000096.1 unplaced-scaffold na na BAUU01000096.1 = NZ_BAUU01000096.1 Primary Assembly 1058 na BAUU01000097.1 unplaced-scaffold na na BAUU01000097.1 = NZ_BAUU01000097.1 Primary Assembly 993 na BAUU01000098.1 unplaced-scaffold na na BAUU01000098.1 = NZ_BAUU01000098.1 Primary Assembly 959 na BAUU01000099.1 unplaced-scaffold na na BAUU01000099.1 = NZ_BAUU01000099.1 Primary Assembly 861 na BAUU01000100.1 unplaced-scaffold na na BAUU01000100.1 = NZ_BAUU01000100.1 Primary Assembly 620 na BAUU01000101.1 unplaced-scaffold na na BAUU01000101.1 = NZ_BAUU01000101.1 Primary Assembly 617 na BAUU01000102.1 unplaced-scaffold na na BAUU01000102.1 = NZ_BAUU01000102.1 Primary Assembly 532 na