# Assembly name: ASM51918v1 # Organism name: Paraburkholderia nodosa DSM 21604 (b-proteobacteria) # Infraspecific name: strain=DSM 21604 # Taxid: 1121127 # BioSample: SAMN02584919 # BioProject: PRJNA165365 # Submitter: DOE Joint Genome Institute # Date: 2014-01-13 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: JAFA01 # Assembly method: Velvet v. 1.1.04; ALLPATHS v. R41043 # Genome coverage: Unknown # Sequencing technology: Illumina # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_000519185.1 # RefSeq assembly accession: GCF_000519185.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_000519195.1 GCF_000519195.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name A3CWDRAFT_scaffold_0.1 unplaced-scaffold na na JAFA01000001.1 = NZ_JAFA01000001.1 Primary Assembly 570637 na A3CWDRAFT_scaffold_1.2 unplaced-scaffold na na JAFA01000002.1 = NZ_JAFA01000002.1 Primary Assembly 431002 na A3CWDRAFT_scaffold_2.3 unplaced-scaffold na na JAFA01000003.1 = NZ_JAFA01000003.1 Primary Assembly 423322 na A3CWDRAFT_scaffold_3.4 unplaced-scaffold na na JAFA01000004.1 = NZ_JAFA01000004.1 Primary Assembly 398002 na A3CWDRAFT_scaffold_4.5 unplaced-scaffold na na JAFA01000005.1 = NZ_JAFA01000005.1 Primary Assembly 394705 na A3CWDRAFT_scaffold_5.6 unplaced-scaffold na na JAFA01000006.1 = NZ_JAFA01000006.1 Primary Assembly 365777 na A3CWDRAFT_scaffold_6.7 unplaced-scaffold na na JAFA01000007.1 = NZ_JAFA01000007.1 Primary Assembly 348014 na A3CWDRAFT_scaffold_7.8 unplaced-scaffold na na JAFA01000008.1 = NZ_JAFA01000008.1 Primary Assembly 336688 na A3CWDRAFT_scaffold_8.9 unplaced-scaffold na na JAFA01000009.1 = NZ_JAFA01000009.1 Primary Assembly 335921 na A3CWDRAFT_scaffold_9.10 unplaced-scaffold na na JAFA01000010.1 = NZ_JAFA01000010.1 Primary Assembly 285304 na A3CWDRAFT_scaffold_10.11 unplaced-scaffold na na JAFA01000011.1 = NZ_JAFA01000011.1 Primary Assembly 242409 na A3CWDRAFT_scaffold_11.12 unplaced-scaffold na na JAFA01000012.1 = NZ_JAFA01000012.1 Primary Assembly 239395 na A3CWDRAFT_scaffold_12.13 unplaced-scaffold na na JAFA01000013.1 = NZ_JAFA01000013.1 Primary Assembly 220133 na A3CWDRAFT_scaffold_13.14 unplaced-scaffold na na JAFA01000014.1 = NZ_JAFA01000014.1 Primary Assembly 208743 na A3CWDRAFT_scaffold_14.15 unplaced-scaffold na na JAFA01000015.1 = NZ_JAFA01000015.1 Primary Assembly 195270 na A3CWDRAFT_scaffold_15.16 unplaced-scaffold na na JAFA01000016.1 = NZ_JAFA01000016.1 Primary Assembly 176532 na A3CWDRAFT_scaffold_16.17 unplaced-scaffold na na JAFA01000017.1 = NZ_JAFA01000017.1 Primary Assembly 172161 na A3CWDRAFT_scaffold_17.18 unplaced-scaffold na na JAFA01000018.1 = NZ_JAFA01000018.1 Primary Assembly 169418 na A3CWDRAFT_scaffold_18.19 unplaced-scaffold na na JAFA01000019.1 = NZ_JAFA01000019.1 Primary Assembly 167521 na A3CWDRAFT_scaffold_19.20 unplaced-scaffold na na JAFA01000020.1 = NZ_JAFA01000020.1 Primary Assembly 162875 na A3CWDRAFT_scaffold_20.21 unplaced-scaffold na na JAFA01000021.1 = NZ_JAFA01000021.1 Primary Assembly 140178 na A3CWDRAFT_scaffold_21.22 unplaced-scaffold na na JAFA01000022.1 = NZ_JAFA01000022.1 Primary Assembly 134897 na A3CWDRAFT_scaffold_22.23 unplaced-scaffold na na JAFA01000023.1 = NZ_JAFA01000023.1 Primary Assembly 133792 na A3CWDRAFT_scaffold_23.24 unplaced-scaffold na na JAFA01000024.1 = NZ_JAFA01000024.1 Primary Assembly 128751 na A3CWDRAFT_scaffold_24.25 unplaced-scaffold na na JAFA01000025.1 = NZ_JAFA01000025.1 Primary Assembly 122743 na A3CWDRAFT_scaffold_25.26 unplaced-scaffold na na JAFA01000026.1 = NZ_JAFA01000026.1 Primary Assembly 116209 na A3CWDRAFT_scaffold_26.27 unplaced-scaffold na na JAFA01000027.1 = NZ_JAFA01000027.1 Primary Assembly 112961 na A3CWDRAFT_scaffold_27.28 unplaced-scaffold na na JAFA01000028.1 = NZ_JAFA01000028.1 Primary Assembly 110462 na A3CWDRAFT_scaffold_28.29 unplaced-scaffold na na JAFA01000029.1 = NZ_JAFA01000029.1 Primary Assembly 103004 na A3CWDRAFT_scaffold_29.30 unplaced-scaffold na na JAFA01000030.1 = NZ_JAFA01000030.1 Primary Assembly 101764 na A3CWDRAFT_scaffold_30.31 unplaced-scaffold na na JAFA01000031.1 = NZ_JAFA01000031.1 Primary Assembly 101065 na A3CWDRAFT_scaffold_31.32 unplaced-scaffold na na JAFA01000032.1 = NZ_JAFA01000032.1 Primary Assembly 101033 na A3CWDRAFT_scaffold_32.33 unplaced-scaffold na na JAFA01000033.1 = NZ_JAFA01000033.1 Primary Assembly 97878 na A3CWDRAFT_scaffold_33.34 unplaced-scaffold na na JAFA01000034.1 = NZ_JAFA01000034.1 Primary Assembly 92518 na A3CWDRAFT_scaffold_34.35 unplaced-scaffold na na JAFA01000035.1 = NZ_JAFA01000035.1 Primary Assembly 88351 na A3CWDRAFT_scaffold_35.36 unplaced-scaffold na na JAFA01000036.1 = NZ_JAFA01000036.1 Primary Assembly 84456 na A3CWDRAFT_scaffold_36.37 unplaced-scaffold na na JAFA01000037.1 = NZ_JAFA01000037.1 Primary Assembly 84007 na A3CWDRAFT_scaffold_37.38 unplaced-scaffold na na JAFA01000038.1 = NZ_JAFA01000038.1 Primary Assembly 77822 na A3CWDRAFT_scaffold_38.39 unplaced-scaffold na na JAFA01000039.1 = NZ_JAFA01000039.1 Primary Assembly 74643 na A3CWDRAFT_scaffold_39.40 unplaced-scaffold na na JAFA01000040.1 = NZ_JAFA01000040.1 Primary Assembly 73665 na A3CWDRAFT_scaffold_40.41 unplaced-scaffold na na JAFA01000041.1 = NZ_JAFA01000041.1 Primary Assembly 72945 na A3CWDRAFT_scaffold_41.42 unplaced-scaffold na na JAFA01000042.1 = NZ_JAFA01000042.1 Primary Assembly 70466 na A3CWDRAFT_scaffold_42.43 unplaced-scaffold na na JAFA01000043.1 = NZ_JAFA01000043.1 Primary Assembly 69694 na A3CWDRAFT_scaffold_43.44 unplaced-scaffold na na JAFA01000044.1 = NZ_JAFA01000044.1 Primary Assembly 69402 na A3CWDRAFT_scaffold_44.45 unplaced-scaffold na na JAFA01000045.1 = NZ_JAFA01000045.1 Primary Assembly 69307 na A3CWDRAFT_scaffold_45.46 unplaced-scaffold na na JAFA01000046.1 = NZ_JAFA01000046.1 Primary Assembly 66904 na A3CWDRAFT_scaffold_46.47 unplaced-scaffold na na JAFA01000047.1 = NZ_JAFA01000047.1 Primary Assembly 64809 na A3CWDRAFT_scaffold_47.48 unplaced-scaffold na na JAFA01000048.1 = NZ_JAFA01000048.1 Primary Assembly 59249 na A3CWDRAFT_scaffold_48.49 unplaced-scaffold na na JAFA01000049.1 = NZ_JAFA01000049.1 Primary Assembly 58717 na A3CWDRAFT_scaffold_49.50 unplaced-scaffold na na JAFA01000050.1 = NZ_JAFA01000050.1 Primary Assembly 55358 na A3CWDRAFT_scaffold_50.51 unplaced-scaffold na na JAFA01000051.1 = NZ_JAFA01000051.1 Primary Assembly 51870 na A3CWDRAFT_scaffold_51.52 unplaced-scaffold na na JAFA01000052.1 = NZ_JAFA01000052.1 Primary Assembly 50704 na A3CWDRAFT_scaffold_52.53 unplaced-scaffold na na JAFA01000053.1 = NZ_JAFA01000053.1 Primary Assembly 47696 na A3CWDRAFT_scaffold_53.54 unplaced-scaffold na na JAFA01000054.1 = NZ_JAFA01000054.1 Primary Assembly 44175 na A3CWDRAFT_scaffold_54.55 unplaced-scaffold na na JAFA01000055.1 = NZ_JAFA01000055.1 Primary Assembly 41330 na A3CWDRAFT_scaffold_56.57 unplaced-scaffold na na JAFA01000058.1 = NZ_JAFA01000058.1 Primary Assembly 39992 na A3CWDRAFT_scaffold_57.58 unplaced-scaffold na na JAFA01000059.1 = NZ_JAFA01000059.1 Primary Assembly 39100 na A3CWDRAFT_scaffold_59.60 unplaced-scaffold na na JAFA01000062.1 = NZ_JAFA01000062.1 Primary Assembly 36551 na A3CWDRAFT_scaffold_60.61 unplaced-scaffold na na JAFA01000063.1 = NZ_JAFA01000063.1 Primary Assembly 36669 na A3CWDRAFT_scaffold_61.62 unplaced-scaffold na na JAFA01000064.1 = NZ_JAFA01000064.1 Primary Assembly 36148 na A3CWDRAFT_scaffold_62.63 unplaced-scaffold na na JAFA01000065.1 = NZ_JAFA01000065.1 Primary Assembly 31381 na A3CWDRAFT_scaffold_63.64 unplaced-scaffold na na JAFA01000066.1 = NZ_JAFA01000066.1 Primary Assembly 26900 na A3CWDRAFT_scaffold_64.65 unplaced-scaffold na na JAFA01000067.1 = NZ_JAFA01000067.1 Primary Assembly 26070 na A3CWDRAFT_scaffold_65.66 unplaced-scaffold na na JAFA01000068.1 = NZ_JAFA01000068.1 Primary Assembly 22468 na A3CWDRAFT_scaffold_66.67 unplaced-scaffold na na JAFA01000069.1 = NZ_JAFA01000069.1 Primary Assembly 22322 na A3CWDRAFT_scaffold_67.68 unplaced-scaffold na na JAFA01000070.1 = NZ_JAFA01000070.1 Primary Assembly 21974 na A3CWDRAFT_scaffold_68.69 unplaced-scaffold na na JAFA01000071.1 = NZ_JAFA01000071.1 Primary Assembly 20707 na A3CWDRAFT_scaffold_69.70 unplaced-scaffold na na JAFA01000072.1 = NZ_JAFA01000072.1 Primary Assembly 20650 na A3CWDRAFT_scaffold_70.71 unplaced-scaffold na na JAFA01000073.1 = NZ_JAFA01000073.1 Primary Assembly 18936 na A3CWDRAFT_scaffold_71.72 unplaced-scaffold na na JAFA01000074.1 = NZ_JAFA01000074.1 Primary Assembly 18373 na A3CWDRAFT_scaffold_72.73 unplaced-scaffold na na JAFA01000075.1 = NZ_JAFA01000075.1 Primary Assembly 18095 na A3CWDRAFT_scaffold_73.74 unplaced-scaffold na na JAFA01000076.1 = NZ_JAFA01000076.1 Primary Assembly 17087 na A3CWDRAFT_scaffold_74.75 unplaced-scaffold na na JAFA01000077.1 = NZ_JAFA01000077.1 Primary Assembly 17002 na A3CWDRAFT_scaffold_75.76 unplaced-scaffold na na JAFA01000078.1 = NZ_JAFA01000078.1 Primary Assembly 15786 na A3CWDRAFT_scaffold_76.77 unplaced-scaffold na na JAFA01000079.1 = NZ_JAFA01000079.1 Primary Assembly 15010 na A3CWDRAFT_scaffold_77.78 unplaced-scaffold na na JAFA01000080.1 = NZ_JAFA01000080.1 Primary Assembly 14131 na A3CWDRAFT_scaffold_78.79 unplaced-scaffold na na JAFA01000081.1 = NZ_JAFA01000081.1 Primary Assembly 14121 na A3CWDRAFT_scaffold_79.80 unplaced-scaffold na na JAFA01000082.1 = NZ_JAFA01000082.1 Primary Assembly 13907 na A3CWDRAFT_scaffold_80.81 unplaced-scaffold na na JAFA01000083.1 = NZ_JAFA01000083.1 Primary Assembly 13354 na A3CWDRAFT_scaffold_81.82 unplaced-scaffold na na JAFA01000084.1 = NZ_JAFA01000084.1 Primary Assembly 13279 na A3CWDRAFT_scaffold_82.83 unplaced-scaffold na na JAFA01000085.1 = NZ_JAFA01000085.1 Primary Assembly 11374 na A3CWDRAFT_scaffold_83.84 unplaced-scaffold na na JAFA01000086.1 = NZ_JAFA01000086.1 Primary Assembly 10904 na A3CWDRAFT_scaffold_84.85 unplaced-scaffold na na JAFA01000087.1 = NZ_JAFA01000087.1 Primary Assembly 10741 na A3CWDRAFT_scaffold_85.86 unplaced-scaffold na na JAFA01000088.1 = NZ_JAFA01000088.1 Primary Assembly 10392 na A3CWDRAFT_scaffold_87.88 unplaced-scaffold na na JAFA01000091.1 = NZ_JAFA01000091.1 Primary Assembly 10100 na A3CWDRAFT_scaffold_88.89 unplaced-scaffold na na JAFA01000092.1 = NZ_JAFA01000092.1 Primary Assembly 9690 na A3CWDRAFT_scaffold_89.90 unplaced-scaffold na na JAFA01000093.1 = NZ_JAFA01000093.1 Primary Assembly 9093 na A3CWDRAFT_scaffold_90.91 unplaced-scaffold na na JAFA01000094.1 = NZ_JAFA01000094.1 Primary Assembly 8832 na A3CWDRAFT_scaffold_92.93 unplaced-scaffold na na JAFA01000097.1 = NZ_JAFA01000097.1 Primary Assembly 7238 na A3CWDRAFT_scaffold_93.94 unplaced-scaffold na na JAFA01000098.1 = NZ_JAFA01000098.1 Primary Assembly 6396 na A3CWDRAFT_scaffold_94.95 unplaced-scaffold na na JAFA01000099.1 = NZ_JAFA01000099.1 Primary Assembly 5739 na A3CWDRAFT_scaffold_95.96 unplaced-scaffold na na JAFA01000100.1 = NZ_JAFA01000100.1 Primary Assembly 5344 na A3CWDRAFT_scaffold_96.97 unplaced-scaffold na na JAFA01000101.1 = NZ_JAFA01000101.1 Primary Assembly 4762 na A3CWDRAFT_scaffold_97.98 unplaced-scaffold na na JAFA01000102.1 = NZ_JAFA01000102.1 Primary Assembly 4730 na A3CWDRAFT_scaffold_98.99 unplaced-scaffold na na JAFA01000103.1 = NZ_JAFA01000103.1 Primary Assembly 4237 na A3CWDRAFT_scaffold_99.100 unplaced-scaffold na na JAFA01000104.1 = NZ_JAFA01000104.1 Primary Assembly 3103 na A3CWDRAFT_scaffold_100.101 unplaced-scaffold na na JAFA01000105.1 = NZ_JAFA01000105.1 Primary Assembly 2722 na A3CWDRAFT_scaffold_101.102 unplaced-scaffold na na JAFA01000106.1 = NZ_JAFA01000106.1 Primary Assembly 2494 na A3CWDRAFT_scaffold_102.103 unplaced-scaffold na na JAFA01000107.1 = NZ_JAFA01000107.1 Primary Assembly 2093 na A3CWDRAFT_scaffold_103.104 unplaced-scaffold na na JAFA01000108.1 = NZ_JAFA01000108.1 Primary Assembly 1847 na A3CWDRAFT_scaffold_104.105 unplaced-scaffold na na JAFA01000109.1 = NZ_JAFA01000109.1 Primary Assembly 1660 na A3CWDRAFT_scaffold_105.106 unplaced-scaffold na na JAFA01000110.1 = NZ_JAFA01000110.1 Primary Assembly 1467 na A3CWDRAFT_scaffold_106.107 unplaced-scaffold na na JAFA01000111.1 = NZ_JAFA01000111.1 Primary Assembly 1415 na A3CWDRAFT_scaffold_107.108 unplaced-scaffold na na JAFA01000112.1 = NZ_JAFA01000112.1 Primary Assembly 1398 na A3CWDRAFT_scaffold_108.109 unplaced-scaffold na na JAFA01000113.1 = NZ_JAFA01000113.1 Primary Assembly 1340 na A3CWDRAFT_scaffold_109.110 unplaced-scaffold na na JAFA01000114.1 = NZ_JAFA01000114.1 Primary Assembly 1397 na A3CWDRAFT_scaffold_110.111 unplaced-scaffold na na JAFA01000115.1 = NZ_JAFA01000115.1 Primary Assembly 1290 na A3CWDRAFT_scaffold_111.112 unplaced-scaffold na na JAFA01000116.1 = NZ_JAFA01000116.1 Primary Assembly 1192 na A3CWDRAFT_scaffold_112.113 unplaced-scaffold na na JAFA01000117.1 = NZ_JAFA01000117.1 Primary Assembly 1033 na A3CWDRAFT_scaffold_55.56 unplaced-scaffold na na KI912594.1 = NZ_KI912594.1 Primary Assembly 41057 na A3CWDRAFT_scaffold_58.59 unplaced-scaffold na na KI912595.1 = NZ_KI912595.1 Primary Assembly 37195 na A3CWDRAFT_scaffold_86.87 unplaced-scaffold na na KI912596.1 = NZ_KI912596.1 Primary Assembly 10359 na A3CWDRAFT_scaffold_91.92 unplaced-scaffold na na KI912597.1 = NZ_KI912597.1 Primary Assembly 8665 na