# Assembly name: ASM51920v1 # Organism name: Amycolatopsis taiwanensis DSM 45107 (high G+C Gram-positive bacteria) # Infraspecific name: strain=DSM 45107 # Taxid: 1120984 # BioSample: SAMN02584918 # BioProject: PRJNA165363 # Submitter: DOE Joint Genome Institute # Date: 2014-01-13 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: JAFB01 # Assembly method: Velvet v. 1.1.04; ALLPATHS v. R41043 # Genome coverage: Unknown # Sequencing technology: Illumina # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_000519205.1 # RefSeq assembly accession: GCF_000519205.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_000519215.1 GCF_000519215.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name A3CUDRAFT_scaffold_1.2 unplaced-scaffold na na JAFB01000003.1 = NZ_JAFB01000003.1 Primary Assembly 499117 na A3CUDRAFT_scaffold_2.3 unplaced-scaffold na na JAFB01000004.1 = NZ_JAFB01000004.1 Primary Assembly 443913 na A3CUDRAFT_scaffold_3.4 unplaced-scaffold na na JAFB01000005.1 = NZ_JAFB01000005.1 Primary Assembly 402318 na A3CUDRAFT_scaffold_5.6 unplaced-scaffold na na JAFB01000008.1 = NZ_JAFB01000008.1 Primary Assembly 303874 na A3CUDRAFT_scaffold_6.7 unplaced-scaffold na na JAFB01000009.1 = NZ_JAFB01000009.1 Primary Assembly 277030 na A3CUDRAFT_scaffold_7.8 unplaced-scaffold na na JAFB01000010.1 = NZ_JAFB01000010.1 Primary Assembly 273715 na A3CUDRAFT_scaffold_9.10 unplaced-scaffold na na JAFB01000013.1 = NZ_JAFB01000013.1 Primary Assembly 269716 na A3CUDRAFT_scaffold_10.11 unplaced-scaffold na na JAFB01000014.1 = NZ_JAFB01000014.1 Primary Assembly 265064 na A3CUDRAFT_scaffold_11.12 unplaced-scaffold na na JAFB01000015.1 = NZ_JAFB01000015.1 Primary Assembly 260507 na A3CUDRAFT_scaffold_12.13 unplaced-scaffold na na JAFB01000016.1 = NZ_JAFB01000016.1 Primary Assembly 252640 na A3CUDRAFT_scaffold_14.15 unplaced-scaffold na na JAFB01000019.1 = NZ_JAFB01000019.1 Primary Assembly 225638 na A3CUDRAFT_scaffold_16.17 unplaced-scaffold na na JAFB01000022.1 = NZ_JAFB01000022.1 Primary Assembly 210441 na A3CUDRAFT_scaffold_17.18 unplaced-scaffold na na JAFB01000023.1 = NZ_JAFB01000023.1 Primary Assembly 198609 na A3CUDRAFT_scaffold_18.19 unplaced-scaffold na na JAFB01000024.1 = NZ_JAFB01000024.1 Primary Assembly 195864 na A3CUDRAFT_scaffold_19.20 unplaced-scaffold na na JAFB01000025.1 = NZ_JAFB01000025.1 Primary Assembly 162526 na A3CUDRAFT_scaffold_20.21 unplaced-scaffold na na JAFB01000026.1 = NZ_JAFB01000026.1 Primary Assembly 155981 na A3CUDRAFT_scaffold_21.22 unplaced-scaffold na na JAFB01000027.1 = NZ_JAFB01000027.1 Primary Assembly 152201 na A3CUDRAFT_scaffold_22.23 unplaced-scaffold na na JAFB01000028.1 = NZ_JAFB01000028.1 Primary Assembly 143276 na A3CUDRAFT_scaffold_23.24 unplaced-scaffold na na JAFB01000029.1 = NZ_JAFB01000029.1 Primary Assembly 124409 na A3CUDRAFT_scaffold_24.25 unplaced-scaffold na na JAFB01000030.1 = NZ_JAFB01000030.1 Primary Assembly 111043 na A3CUDRAFT_scaffold_25.26 unplaced-scaffold na na JAFB01000031.1 = NZ_JAFB01000031.1 Primary Assembly 105815 na A3CUDRAFT_scaffold_26.27 unplaced-scaffold na na JAFB01000032.1 = NZ_JAFB01000032.1 Primary Assembly 105574 na A3CUDRAFT_scaffold_27.28 unplaced-scaffold na na JAFB01000033.1 = NZ_JAFB01000033.1 Primary Assembly 105461 na A3CUDRAFT_scaffold_28.29 unplaced-scaffold na na JAFB01000034.1 = NZ_JAFB01000034.1 Primary Assembly 105203 na A3CUDRAFT_scaffold_29.30 unplaced-scaffold na na JAFB01000035.1 = NZ_JAFB01000035.1 Primary Assembly 101789 na A3CUDRAFT_scaffold_30.31 unplaced-scaffold na na JAFB01000036.1 = NZ_JAFB01000036.1 Primary Assembly 97220 na A3CUDRAFT_scaffold_31.32 unplaced-scaffold na na JAFB01000037.1 = NZ_JAFB01000037.1 Primary Assembly 95274 na A3CUDRAFT_scaffold_32.33 unplaced-scaffold na na JAFB01000038.1 = NZ_JAFB01000038.1 Primary Assembly 93398 na A3CUDRAFT_scaffold_33.34 unplaced-scaffold na na JAFB01000039.1 = NZ_JAFB01000039.1 Primary Assembly 89240 na A3CUDRAFT_scaffold_34.35 unplaced-scaffold na na JAFB01000040.1 = NZ_JAFB01000040.1 Primary Assembly 85064 na A3CUDRAFT_scaffold_35.36 unplaced-scaffold na na JAFB01000041.1 = NZ_JAFB01000041.1 Primary Assembly 84185 na A3CUDRAFT_scaffold_36.37 unplaced-scaffold na na JAFB01000042.1 = NZ_JAFB01000042.1 Primary Assembly 80902 na A3CUDRAFT_scaffold_37.38 unplaced-scaffold na na JAFB01000043.1 = NZ_JAFB01000043.1 Primary Assembly 80550 na A3CUDRAFT_scaffold_38.39 unplaced-scaffold na na JAFB01000044.1 = NZ_JAFB01000044.1 Primary Assembly 73091 na A3CUDRAFT_scaffold_39.40 unplaced-scaffold na na JAFB01000045.1 = NZ_JAFB01000045.1 Primary Assembly 71748 na A3CUDRAFT_scaffold_40.41 unplaced-scaffold na na JAFB01000046.1 = NZ_JAFB01000046.1 Primary Assembly 68857 na A3CUDRAFT_scaffold_41.42 unplaced-scaffold na na JAFB01000047.1 = NZ_JAFB01000047.1 Primary Assembly 63380 na A3CUDRAFT_scaffold_42.43 unplaced-scaffold na na JAFB01000048.1 = NZ_JAFB01000048.1 Primary Assembly 57802 na A3CUDRAFT_scaffold_43.44 unplaced-scaffold na na JAFB01000049.1 = NZ_JAFB01000049.1 Primary Assembly 52939 na A3CUDRAFT_scaffold_44.45 unplaced-scaffold na na JAFB01000050.1 = NZ_JAFB01000050.1 Primary Assembly 51762 na A3CUDRAFT_scaffold_45.46 unplaced-scaffold na na JAFB01000051.1 = NZ_JAFB01000051.1 Primary Assembly 51319 na A3CUDRAFT_scaffold_46.47 unplaced-scaffold na na JAFB01000052.1 = NZ_JAFB01000052.1 Primary Assembly 46470 na A3CUDRAFT_scaffold_47.48 unplaced-scaffold na na JAFB01000053.1 = NZ_JAFB01000053.1 Primary Assembly 45438 na A3CUDRAFT_scaffold_48.49 unplaced-scaffold na na JAFB01000054.1 = NZ_JAFB01000054.1 Primary Assembly 43283 na A3CUDRAFT_scaffold_49.50 unplaced-scaffold na na JAFB01000055.1 = NZ_JAFB01000055.1 Primary Assembly 40016 na A3CUDRAFT_scaffold_50.51 unplaced-scaffold na na JAFB01000056.1 = NZ_JAFB01000056.1 Primary Assembly 38659 na A3CUDRAFT_scaffold_51.52 unplaced-scaffold na na JAFB01000057.1 = NZ_JAFB01000057.1 Primary Assembly 32315 na A3CUDRAFT_scaffold_52.53 unplaced-scaffold na na JAFB01000058.1 = NZ_JAFB01000058.1 Primary Assembly 25869 na A3CUDRAFT_scaffold_53.54 unplaced-scaffold na na JAFB01000059.1 = NZ_JAFB01000059.1 Primary Assembly 23856 na A3CUDRAFT_scaffold_54.55 unplaced-scaffold na na JAFB01000060.1 = NZ_JAFB01000060.1 Primary Assembly 23683 na A3CUDRAFT_scaffold_55.56 unplaced-scaffold na na JAFB01000061.1 = NZ_JAFB01000061.1 Primary Assembly 23169 na A3CUDRAFT_scaffold_56.57 unplaced-scaffold na na JAFB01000062.1 = NZ_JAFB01000062.1 Primary Assembly 20597 na A3CUDRAFT_scaffold_57.58 unplaced-scaffold na na JAFB01000063.1 = NZ_JAFB01000063.1 Primary Assembly 18697 na A3CUDRAFT_scaffold_58.59 unplaced-scaffold na na JAFB01000064.1 = NZ_JAFB01000064.1 Primary Assembly 14254 na A3CUDRAFT_scaffold_59.60 unplaced-scaffold na na JAFB01000065.1 = NZ_JAFB01000065.1 Primary Assembly 12717 na A3CUDRAFT_scaffold_60.61 unplaced-scaffold na na JAFB01000066.1 = NZ_JAFB01000066.1 Primary Assembly 11341 na A3CUDRAFT_scaffold_61.62 unplaced-scaffold na na JAFB01000067.1 = NZ_JAFB01000067.1 Primary Assembly 8436 na A3CUDRAFT_scaffold_62.63 unplaced-scaffold na na JAFB01000068.1 = NZ_JAFB01000068.1 Primary Assembly 7106 na A3CUDRAFT_scaffold_63.64 unplaced-scaffold na na JAFB01000069.1 = NZ_JAFB01000069.1 Primary Assembly 6702 na A3CUDRAFT_scaffold_64.65 unplaced-scaffold na na JAFB01000070.1 = NZ_JAFB01000070.1 Primary Assembly 5987 na A3CUDRAFT_scaffold_65.66 unplaced-scaffold na na JAFB01000071.1 = NZ_JAFB01000071.1 Primary Assembly 4938 na A3CUDRAFT_scaffold_66.67 unplaced-scaffold na na JAFB01000072.1 = NZ_JAFB01000072.1 Primary Assembly 3712 na A3CUDRAFT_scaffold_67.68 unplaced-scaffold na na JAFB01000073.1 = NZ_JAFB01000073.1 Primary Assembly 2528 na A3CUDRAFT_scaffold_68.69 unplaced-scaffold na na JAFB01000074.1 = NZ_JAFB01000074.1 Primary Assembly 1910 na A3CUDRAFT_scaffold_69.70 unplaced-scaffold na na JAFB01000075.1 = NZ_JAFB01000075.1 Primary Assembly 1464 na A3CUDRAFT_scaffold_70.71 unplaced-scaffold na na JAFB01000076.1 = NZ_JAFB01000076.1 Primary Assembly 1335 na A3CUDRAFT_scaffold_71.72 unplaced-scaffold na na JAFB01000077.1 = NZ_JAFB01000077.1 Primary Assembly 1334 na A3CUDRAFT_scaffold_72.73 unplaced-scaffold na na JAFB01000078.1 = NZ_JAFB01000078.1 Primary Assembly 1066 na A3CUDRAFT_scaffold_0.1 unplaced-scaffold na na KI912598.1 = NZ_KI912598.1 Primary Assembly 558255 na A3CUDRAFT_scaffold_13.14 unplaced-scaffold na na KI912599.1 = NZ_KI912599.1 Primary Assembly 227882 na A3CUDRAFT_scaffold_15.16 unplaced-scaffold na na KI912600.1 = NZ_KI912600.1 Primary Assembly 225750 na A3CUDRAFT_scaffold_4.5 unplaced-scaffold na na KI912601.1 = NZ_KI912601.1 Primary Assembly 378820 na A3CUDRAFT_scaffold_8.9 unplaced-scaffold na na KI912602.1 = NZ_KI912602.1 Primary Assembly 271465 na