# Assembly name: of Aquimarina pacifica # Organism name: Aquimarina pacifica (CFB group bacteria) # Infraspecific name: strain=SW150 # Taxid: 1296415 # BioSample: SAMN02597432 # BioProject: PRJNA232735 # Submitter: ocean university of China # Date: 2014-01-16 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: JACC01 # Assembly method: SOAPdenovo v. 1.05 # Expected final version: no # Genome coverage: 100.0x # Sequencing technology: Illumina GAIIx # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_000520955.1 # RefSeq assembly accession: GCF_000520955.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_000520965.1 GCF_000520965.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name contig1_scaffold1 unplaced-scaffold na na JACC01000001.1 = NZ_JACC01000001.1 Primary Assembly 293709 na contig2_scaffold2 unplaced-scaffold na na JACC01000002.1 = NZ_JACC01000002.1 Primary Assembly 278663 na contig3_scaffold3 unplaced-scaffold na na JACC01000003.1 = NZ_JACC01000003.1 Primary Assembly 278504 na contig4_scaffold4 unplaced-scaffold na na JACC01000004.1 = NZ_JACC01000004.1 Primary Assembly 3407 na contig5_scaffold4 unplaced-scaffold na na JACC01000005.1 = NZ_JACC01000005.1 Primary Assembly 267 na contig6_scaffold4 unplaced-scaffold na na JACC01000006.1 = NZ_JACC01000006.1 Primary Assembly 235170 na contig7_scaffold5 unplaced-scaffold na na JACC01000007.1 = NZ_JACC01000007.1 Primary Assembly 221912 na contig8_scaffold6 unplaced-scaffold na na JACC01000008.1 = NZ_JACC01000008.1 Primary Assembly 181862 na contig9_scaffold7 unplaced-scaffold na na JACC01000009.1 = NZ_JACC01000009.1 Primary Assembly 176430 na contig10_scaffold8 unplaced-scaffold na na JACC01000010.1 = NZ_JACC01000010.1 Primary Assembly 175428 na contig11_scaffold9 unplaced-scaffold na na JACC01000011.1 = NZ_JACC01000011.1 Primary Assembly 160695 na contig12_scaffold10 unplaced-scaffold na na JACC01000012.1 = NZ_JACC01000012.1 Primary Assembly 158411 na contig13_scaffold11 unplaced-scaffold na na JACC01000013.1 = NZ_JACC01000013.1 Primary Assembly 158259 na contig14_scaffold12 unplaced-scaffold na na JACC01000014.1 = NZ_JACC01000014.1 Primary Assembly 153924 na contig15_scaffold13 unplaced-scaffold na na JACC01000015.1 = NZ_JACC01000015.1 Primary Assembly 124110 na contig16_scaffold13 unplaced-scaffold na na JACC01000016.1 = NZ_JACC01000016.1 Primary Assembly 186 na contig17_scaffold13 unplaced-scaffold na na JACC01000017.1 = NZ_JACC01000017.1 Primary Assembly 278 na contig18_scaffold13 unplaced-scaffold na na JACC01000018.1 = NZ_JACC01000018.1 Primary Assembly 67 na contig19_scaffold13 unplaced-scaffold na na JACC01000019.1 = NZ_JACC01000019.1 Primary Assembly 22381 na contig20_scaffold14 unplaced-scaffold na na JACC01000020.1 = NZ_JACC01000020.1 Primary Assembly 143353 na contig21_scaffold15 unplaced-scaffold na na JACC01000021.1 = NZ_JACC01000021.1 Primary Assembly 134809 na contig22_scaffold16 unplaced-scaffold na na JACC01000022.1 = NZ_JACC01000022.1 Primary Assembly 116168 na contig23_scaffold17 unplaced-scaffold na na JACC01000023.1 = NZ_JACC01000023.1 Primary Assembly 99291 na contig24_scaffold18 unplaced-scaffold na na JACC01000024.1 = NZ_JACC01000024.1 Primary Assembly 19783 na contig25_scaffold18 unplaced-scaffold na na JACC01000025.1 = NZ_JACC01000025.1 Primary Assembly 79290 na contig26_scaffold19 unplaced-scaffold na na JACC01000026.1 = NZ_JACC01000026.1 Primary Assembly 95461 na contig27_scaffold20 unplaced-scaffold na na JACC01000027.1 = NZ_JACC01000027.1 Primary Assembly 95302 na contig28_scaffold21 unplaced-scaffold na na JACC01000028.1 = NZ_JACC01000028.1 Primary Assembly 90183 na contig29_scaffold22 unplaced-scaffold na na JACC01000029.1 = NZ_JACC01000029.1 Primary Assembly 83345 na contig30_scaffold23 unplaced-scaffold na na JACC01000030.1 = NZ_JACC01000030.1 Primary Assembly 81873 na contig31_scaffold23 unplaced-scaffold na na JACC01000031.1 = NZ_JACC01000031.1 Primary Assembly 65 na contig32_scaffold24 unplaced-scaffold na na JACC01000032.1 = NZ_JACC01000032.1 Primary Assembly 81671 na contig33_scaffold25 unplaced-scaffold na na JACC01000033.1 = NZ_JACC01000033.1 Primary Assembly 24872 na contig34_scaffold25 unplaced-scaffold na na JACC01000034.1 = NZ_JACC01000034.1 Primary Assembly 54481 na contig35_scaffold26 unplaced-scaffold na na JACC01000035.1 = NZ_JACC01000035.1 Primary Assembly 79054 na contig36_scaffold27 unplaced-scaffold na na JACC01000036.1 = NZ_JACC01000036.1 Primary Assembly 77463 na contig37_scaffold28 unplaced-scaffold na na JACC01000037.1 = NZ_JACC01000037.1 Primary Assembly 72576 na contig38_scaffold29 unplaced-scaffold na na JACC01000038.1 = NZ_JACC01000038.1 Primary Assembly 71696 na contig39_scaffold30 unplaced-scaffold na na JACC01000039.1 = NZ_JACC01000039.1 Primary Assembly 66967 na contig40_scaffold31 unplaced-scaffold na na JACC01000040.1 = NZ_JACC01000040.1 Primary Assembly 66205 na contig41_scaffold32 unplaced-scaffold na na JACC01000041.1 = NZ_JACC01000041.1 Primary Assembly 64574 na contig42_scaffold33 unplaced-scaffold na na JACC01000042.1 = NZ_JACC01000042.1 Primary Assembly 64267 na contig43_scaffold34 unplaced-scaffold na na JACC01000043.1 = NZ_JACC01000043.1 Primary Assembly 62196 na contig44_scaffold35 unplaced-scaffold na na JACC01000044.1 = NZ_JACC01000044.1 Primary Assembly 55051 na contig45_scaffold35 unplaced-scaffold na na JACC01000045.1 = NZ_JACC01000045.1 Primary Assembly 45 na contig46_scaffold36 unplaced-scaffold na na JACC01000046.1 = NZ_JACC01000046.1 Primary Assembly 49755 na contig47_scaffold36 unplaced-scaffold na na JACC01000047.1 = NZ_JACC01000047.1 Primary Assembly 226 na contig48_scaffold37 unplaced-scaffold na na JACC01000048.1 = NZ_JACC01000048.1 Primary Assembly 49800 na contig49_scaffold38 unplaced-scaffold na na JACC01000049.1 = NZ_JACC01000049.1 Primary Assembly 593 na contig50_scaffold38 unplaced-scaffold na na JACC01000050.1 = NZ_JACC01000050.1 Primary Assembly 47733 na contig51_scaffold39 unplaced-scaffold na na JACC01000051.1 = NZ_JACC01000051.1 Primary Assembly 45729 na contig52_scaffold40 unplaced-scaffold na na JACC01000052.1 = NZ_JACC01000052.1 Primary Assembly 40002 na contig53_scaffold41 unplaced-scaffold na na JACC01000053.1 = NZ_JACC01000053.1 Primary Assembly 38040 na contig54_scaffold42 unplaced-scaffold na na JACC01000054.1 = NZ_JACC01000054.1 Primary Assembly 35641 na contig55_scaffold43 unplaced-scaffold na na JACC01000055.1 = NZ_JACC01000055.1 Primary Assembly 8729 na contig56_scaffold43 unplaced-scaffold na na JACC01000056.1 = NZ_JACC01000056.1 Primary Assembly 22369 na contig57_scaffold44 unplaced-scaffold na na JACC01000057.1 = NZ_JACC01000057.1 Primary Assembly 30289 na contig58_scaffold45 unplaced-scaffold na na JACC01000058.1 = NZ_JACC01000058.1 Primary Assembly 29465 na contig59_scaffold46 unplaced-scaffold na na JACC01000059.1 = NZ_JACC01000059.1 Primary Assembly 29419 na contig60_scaffold47 unplaced-scaffold na na JACC01000060.1 = NZ_JACC01000060.1 Primary Assembly 24836 na contig61_scaffold48 unplaced-scaffold na na JACC01000061.1 = NZ_JACC01000061.1 Primary Assembly 24194 na contig62_scaffold49 unplaced-scaffold na na JACC01000062.1 = NZ_JACC01000062.1 Primary Assembly 24016 na contig63_scaffold50 unplaced-scaffold na na JACC01000063.1 = NZ_JACC01000063.1 Primary Assembly 23554 na contig64_scaffold51 unplaced-scaffold na na JACC01000064.1 = NZ_JACC01000064.1 Primary Assembly 22869 na contig65_scaffold52 unplaced-scaffold na na JACC01000065.1 = NZ_JACC01000065.1 Primary Assembly 18545 na contig66_scaffold53 unplaced-scaffold na na JACC01000066.1 = NZ_JACC01000066.1 Primary Assembly 18021 na contig67_scaffold54 unplaced-scaffold na na JACC01000067.1 = NZ_JACC01000067.1 Primary Assembly 17251 na contig68_scaffold55 unplaced-scaffold na na JACC01000068.1 = NZ_JACC01000068.1 Primary Assembly 13888 na contig69_scaffold56 unplaced-scaffold na na JACC01000069.1 = NZ_JACC01000069.1 Primary Assembly 9621 na contig70_scaffold57 unplaced-scaffold na na JACC01000070.1 = NZ_JACC01000070.1 Primary Assembly 8029 na contig71_scaffold58 unplaced-scaffold na na JACC01000071.1 = NZ_JACC01000071.1 Primary Assembly 7745 na contig72_scaffold59 unplaced-scaffold na na JACC01000072.1 = NZ_JACC01000072.1 Primary Assembly 7115 na contig73_scaffold60 unplaced-scaffold na na JACC01000073.1 = NZ_JACC01000073.1 Primary Assembly 6543 na contig74_scaffold61 unplaced-scaffold na na JACC01000074.1 = NZ_JACC01000074.1 Primary Assembly 6221 na contig75_scaffold62 unplaced-scaffold na na JACC01000075.1 = NZ_JACC01000075.1 Primary Assembly 5960 na contig76_scaffold63 unplaced-scaffold na na JACC01000076.1 = NZ_JACC01000076.1 Primary Assembly 4305 na contig77_scaffold64 unplaced-scaffold na na JACC01000077.1 = NZ_JACC01000077.1 Primary Assembly 4187 na contig78_scaffold65 unplaced-scaffold na na JACC01000078.1 = NZ_JACC01000078.1 Primary Assembly 3862 na contig79_scaffold66 unplaced-scaffold na na JACC01000079.1 = NZ_JACC01000079.1 Primary Assembly 3830 na contig80_scaffold67 unplaced-scaffold na na JACC01000080.1 = NZ_JACC01000080.1 Primary Assembly 3533 na contig81_scaffold68 unplaced-scaffold na na JACC01000081.1 = NZ_JACC01000081.1 Primary Assembly 3300 na contig82_scaffold69 unplaced-scaffold na na JACC01000082.1 = NZ_JACC01000082.1 Primary Assembly 3189 na contig83_scaffold70 unplaced-scaffold na na JACC01000083.1 = NZ_JACC01000083.1 Primary Assembly 3053 na contig84_scaffold71 unplaced-scaffold na na JACC01000084.1 = NZ_JACC01000084.1 Primary Assembly 2927 na contig85_scaffold72 unplaced-scaffold na na JACC01000085.1 = NZ_JACC01000085.1 Primary Assembly 2772 na contig86_scaffold73 unplaced-scaffold na na JACC01000086.1 = NZ_JACC01000086.1 Primary Assembly 2714 na contig87_scaffold74 unplaced-scaffold na na JACC01000087.1 = NZ_JACC01000087.1 Primary Assembly 2701 na contig88_scaffold75 unplaced-scaffold na na JACC01000088.1 = NZ_JACC01000088.1 Primary Assembly 2485 na contig89_scaffold76 unplaced-scaffold na na JACC01000089.1 = NZ_JACC01000089.1 Primary Assembly 2419 na contig90_scaffold77 unplaced-scaffold na na JACC01000090.1 = NZ_JACC01000090.1 Primary Assembly 2351 na contig91_scaffold78 unplaced-scaffold na na JACC01000091.1 = NZ_JACC01000091.1 Primary Assembly 2285 na contig92_scaffold79 unplaced-scaffold na na JACC01000092.1 = NZ_JACC01000092.1 Primary Assembly 2163 na contig93_scaffold80 unplaced-scaffold na na JACC01000093.1 = NZ_JACC01000093.1 Primary Assembly 1926 na contig94_scaffold81 unplaced-scaffold na na JACC01000094.1 = NZ_JACC01000094.1 Primary Assembly 1841 na contig95_scaffold82 unplaced-scaffold na na JACC01000095.1 = NZ_JACC01000095.1 Primary Assembly 1830 na contig96_scaffold83 unplaced-scaffold na na JACC01000096.1 = NZ_JACC01000096.1 Primary Assembly 1661 na contig97_scaffold84 unplaced-scaffold na na JACC01000097.1 = NZ_JACC01000097.1 Primary Assembly 1575 na contig98_scaffold85 unplaced-scaffold na na JACC01000098.1 = NZ_JACC01000098.1 Primary Assembly 1533 na contig99_scaffold86 unplaced-scaffold na na JACC01000099.1 = NZ_JACC01000099.1 Primary Assembly 1170 na contig100_scaffold86 unplaced-scaffold na na JACC01000100.1 = NZ_JACC01000100.1 Primary Assembly 303 na contig101_scaffold87 unplaced-scaffold na na JACC01000101.1 = NZ_JACC01000101.1 Primary Assembly 1431 na contig102_scaffold88 unplaced-scaffold na na JACC01000102.1 = NZ_JACC01000102.1 Primary Assembly 1360 na contig103_scaffold89 unplaced-scaffold na na JACC01000103.1 = NZ_JACC01000103.1 Primary Assembly 1358 na contig104_scaffold90 unplaced-scaffold na na JACC01000104.1 = NZ_JACC01000104.1 Primary Assembly 1317 na contig105_scaffold91 unplaced-scaffold na na JACC01000105.1 = NZ_JACC01000105.1 Primary Assembly 1303 na contig106_scaffold92 unplaced-scaffold na na JACC01000106.1 = NZ_JACC01000106.1 Primary Assembly 1208 na contig107_scaffold93 unplaced-scaffold na na JACC01000107.1 = NZ_JACC01000107.1 Primary Assembly 1175 na contig108_scaffold94 unplaced-scaffold na na JACC01000108.1 = NZ_JACC01000108.1 Primary Assembly 1134 na contig109_scaffold95 unplaced-scaffold na na JACC01000109.1 = NZ_JACC01000109.1 Primary Assembly 1086 na contig110_scaffold96 unplaced-scaffold na na JACC01000110.1 = NZ_JACC01000110.1 Primary Assembly 857 na contig111_scaffold97 unplaced-scaffold na na JACC01000111.1 = NZ_JACC01000111.1 Primary Assembly 842 na contig112_scaffold98 unplaced-scaffold na na JACC01000112.1 = NZ_JACC01000112.1 Primary Assembly 822 na contig113_scaffold99 unplaced-scaffold na na JACC01000113.1 = NZ_JACC01000113.1 Primary Assembly 811 na contig114_scaffold100 unplaced-scaffold na na JACC01000114.1 = NZ_JACC01000114.1 Primary Assembly 794 na contig115_scaffold101 unplaced-scaffold na na JACC01000115.1 = NZ_JACC01000115.1 Primary Assembly 788 na contig116_scaffold102 unplaced-scaffold na na JACC01000116.1 = NZ_JACC01000116.1 Primary Assembly 86 na contig117_scaffold102 unplaced-scaffold na na JACC01000117.1 = NZ_JACC01000117.1 Primary Assembly 668 na contig118_scaffold103 unplaced-scaffold na na JACC01000118.1 = NZ_JACC01000118.1 Primary Assembly 748 na contig119_scaffold104 unplaced-scaffold na na JACC01000119.1 = NZ_JACC01000119.1 Primary Assembly 747 na contig120_scaffold105 unplaced-scaffold na na JACC01000120.1 = NZ_JACC01000120.1 Primary Assembly 720 na contig121_scaffold106 unplaced-scaffold na na JACC01000121.1 = NZ_JACC01000121.1 Primary Assembly 652 na contig122_scaffold107 unplaced-scaffold na na JACC01000122.1 = NZ_JACC01000122.1 Primary Assembly 648 na contig123_scaffold108 unplaced-scaffold na na JACC01000123.1 = NZ_JACC01000123.1 Primary Assembly 618 na contig124_scaffold109 unplaced-scaffold na na JACC01000124.1 = NZ_JACC01000124.1 Primary Assembly 373 na contig125_scaffold109 unplaced-scaffold na na JACC01000125.1 = NZ_JACC01000125.1 Primary Assembly 166 na contig126_scaffold110 unplaced-scaffold na na JACC01000126.1 = NZ_JACC01000126.1 Primary Assembly 515 na contig127_scaffold111 unplaced-scaffold na na JACC01000127.1 = NZ_JACC01000127.1 Primary Assembly 491 na contig128_scaffold112 unplaced-scaffold na na JACC01000128.1 = NZ_JACC01000128.1 Primary Assembly 490 na contig129_scaffold113 unplaced-scaffold na na JACC01000129.1 = NZ_JACC01000129.1 Primary Assembly 480 na contig130_scaffold114 unplaced-scaffold na na JACC01000130.1 = NZ_JACC01000130.1 Primary Assembly 472 na contig131_scaffold115 unplaced-scaffold na na JACC01000131.1 = NZ_JACC01000131.1 Primary Assembly 463 na contig132_scaffold116 unplaced-scaffold na na JACC01000132.1 = NZ_JACC01000132.1 Primary Assembly 311 na contig133_scaffold116 unplaced-scaffold na na JACC01000133.1 = NZ_JACC01000133.1 Primary Assembly 120 na contig134_scaffold117 unplaced-scaffold na na JACC01000134.1 = NZ_JACC01000134.1 Primary Assembly 197 na contig135_scaffold117 unplaced-scaffold na na JACC01000135.1 = NZ_JACC01000135.1 Primary Assembly 106 na contig136_scaffold118 unplaced-scaffold na na JACC01000136.1 = NZ_JACC01000136.1 Primary Assembly 419 na contig137_scaffold119 unplaced-scaffold na na JACC01000137.1 = NZ_JACC01000137.1 Primary Assembly 409 na contig138_scaffold120 unplaced-scaffold na na JACC01000138.1 = NZ_JACC01000138.1 Primary Assembly 392 na contig139_scaffold121 unplaced-scaffold na na JACC01000139.1 = NZ_JACC01000139.1 Primary Assembly 360 na contig140_scaffold122 unplaced-scaffold na na JACC01000140.1 = NZ_JACC01000140.1 Primary Assembly 350 na contig141_scaffold123 unplaced-scaffold na na JACC01000141.1 = NZ_JACC01000141.1 Primary Assembly 346 na contig142_scaffold124 unplaced-scaffold na na JACC01000142.1 = NZ_JACC01000142.1 Primary Assembly 338 na contig143_scaffold125 unplaced-scaffold na na JACC01000143.1 = NZ_JACC01000143.1 Primary Assembly 334 na contig144_scaffold126 unplaced-scaffold na na JACC01000144.1 = NZ_JACC01000144.1 Primary Assembly 324 na contig145_scaffold127 unplaced-scaffold na na JACC01000145.1 = NZ_JACC01000145.1 Primary Assembly 321 na