# Assembly name: ASM61594v1 # Organism name: Caldalkalibacillus mannanilyticus JCM 10596 (firmicutes) # Infraspecific name: strain=JCM 10596 # Taxid: 1236954 # BioSample: SAMD00012480 # BioProject: PRJDB653 # Submitter: The University of Tokyo # Date: 2014-03-31 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: BAMO01 # Assembly method: Newbler v. 2.8 # Genome coverage: 23x # Sequencing technology: Ion PGM # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_000615945.1 # RefSeq assembly accession: GCF_000615945.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_000615955.1 GCF_000615955.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name BAMO01000001.1 unplaced-scaffold na na BAMO01000001.1 = NZ_BAMO01000001.1 Primary Assembly 216565 na BAMO01000002.1 unplaced-scaffold na na BAMO01000002.1 = NZ_BAMO01000002.1 Primary Assembly 201459 na BAMO01000003.1 unplaced-scaffold na na BAMO01000003.1 = NZ_BAMO01000003.1 Primary Assembly 191920 na BAMO01000004.1 unplaced-scaffold na na BAMO01000004.1 = NZ_BAMO01000004.1 Primary Assembly 178323 na BAMO01000005.1 unplaced-scaffold na na BAMO01000005.1 = NZ_BAMO01000005.1 Primary Assembly 153012 na BAMO01000006.1 unplaced-scaffold na na BAMO01000006.1 = NZ_BAMO01000006.1 Primary Assembly 148913 na BAMO01000007.1 unplaced-scaffold na na BAMO01000007.1 = NZ_BAMO01000007.1 Primary Assembly 131543 na BAMO01000008.1 unplaced-scaffold na na BAMO01000008.1 = NZ_BAMO01000008.1 Primary Assembly 110084 na BAMO01000009.1 unplaced-scaffold na na BAMO01000009.1 = NZ_BAMO01000009.1 Primary Assembly 105736 na BAMO01000010.1 unplaced-scaffold na na BAMO01000010.1 = NZ_BAMO01000010.1 Primary Assembly 103425 na BAMO01000011.1 unplaced-scaffold na na BAMO01000011.1 = NZ_BAMO01000011.1 Primary Assembly 96396 na BAMO01000012.1 unplaced-scaffold na na BAMO01000012.1 = NZ_BAMO01000012.1 Primary Assembly 96404 na BAMO01000013.1 unplaced-scaffold na na BAMO01000013.1 = NZ_BAMO01000013.1 Primary Assembly 94821 na BAMO01000014.1 unplaced-scaffold na na BAMO01000014.1 = NZ_BAMO01000014.1 Primary Assembly 88552 na BAMO01000015.1 unplaced-scaffold na na BAMO01000015.1 = NZ_BAMO01000015.1 Primary Assembly 88535 na BAMO01000016.1 unplaced-scaffold na na BAMO01000016.1 = NZ_BAMO01000016.1 Primary Assembly 87359 na BAMO01000017.1 unplaced-scaffold na na BAMO01000017.1 = NZ_BAMO01000017.1 Primary Assembly 85475 na BAMO01000018.1 unplaced-scaffold na na BAMO01000018.1 = NZ_BAMO01000018.1 Primary Assembly 85336 na BAMO01000019.1 unplaced-scaffold na na BAMO01000019.1 = NZ_BAMO01000019.1 Primary Assembly 83087 na BAMO01000020.1 unplaced-scaffold na na BAMO01000020.1 = NZ_BAMO01000020.1 Primary Assembly 81171 na BAMO01000021.1 unplaced-scaffold na na BAMO01000021.1 = NZ_BAMO01000021.1 Primary Assembly 80583 na BAMO01000022.1 unplaced-scaffold na na BAMO01000022.1 = NZ_BAMO01000022.1 Primary Assembly 80368 na BAMO01000023.1 unplaced-scaffold na na BAMO01000023.1 = NZ_BAMO01000023.1 Primary Assembly 80059 na BAMO01000024.1 unplaced-scaffold na na BAMO01000024.1 = NZ_BAMO01000024.1 Primary Assembly 79606 na BAMO01000025.1 unplaced-scaffold na na BAMO01000025.1 = NZ_BAMO01000025.1 Primary Assembly 75622 na BAMO01000026.1 unplaced-scaffold na na BAMO01000026.1 = NZ_BAMO01000026.1 Primary Assembly 75340 na BAMO01000027.1 unplaced-scaffold na na BAMO01000027.1 = NZ_BAMO01000027.1 Primary Assembly 74881 na BAMO01000028.1 unplaced-scaffold na na BAMO01000028.1 = NZ_BAMO01000028.1 Primary Assembly 72574 na BAMO01000029.1 unplaced-scaffold na na BAMO01000029.1 = NZ_BAMO01000029.1 Primary Assembly 72270 na BAMO01000030.1 unplaced-scaffold na na BAMO01000030.1 = NZ_BAMO01000030.1 Primary Assembly 68540 na BAMO01000031.1 unplaced-scaffold na na BAMO01000031.1 = NZ_BAMO01000031.1 Primary Assembly 61095 na BAMO01000032.1 unplaced-scaffold na na BAMO01000032.1 = NZ_BAMO01000032.1 Primary Assembly 61053 na BAMO01000033.1 unplaced-scaffold na na BAMO01000033.1 = NZ_BAMO01000033.1 Primary Assembly 60723 na BAMO01000034.1 unplaced-scaffold na na BAMO01000034.1 = NZ_BAMO01000034.1 Primary Assembly 60498 na BAMO01000035.1 unplaced-scaffold na na BAMO01000035.1 = NZ_BAMO01000035.1 Primary Assembly 54121 na BAMO01000036.1 unplaced-scaffold na na BAMO01000036.1 = NZ_BAMO01000036.1 Primary Assembly 53951 na BAMO01000037.1 unplaced-scaffold na na BAMO01000037.1 = NZ_BAMO01000037.1 Primary Assembly 53931 na BAMO01000038.1 unplaced-scaffold na na BAMO01000038.1 = NZ_BAMO01000038.1 Primary Assembly 49953 na BAMO01000039.1 unplaced-scaffold na na BAMO01000039.1 = NZ_BAMO01000039.1 Primary Assembly 48408 na BAMO01000040.1 unplaced-scaffold na na BAMO01000040.1 = NZ_BAMO01000040.1 Primary Assembly 48378 na BAMO01000041.1 unplaced-scaffold na na BAMO01000041.1 = NZ_BAMO01000041.1 Primary Assembly 44369 na BAMO01000042.1 unplaced-scaffold na na BAMO01000042.1 = NZ_BAMO01000042.1 Primary Assembly 43723 na BAMO01000043.1 unplaced-scaffold na na BAMO01000043.1 = NZ_BAMO01000043.1 Primary Assembly 41631 na BAMO01000044.1 unplaced-scaffold na na BAMO01000044.1 = NZ_BAMO01000044.1 Primary Assembly 41510 na BAMO01000045.1 unplaced-scaffold na na BAMO01000045.1 = NZ_BAMO01000045.1 Primary Assembly 41160 na BAMO01000046.1 unplaced-scaffold na na BAMO01000046.1 = NZ_BAMO01000046.1 Primary Assembly 40737 na BAMO01000047.1 unplaced-scaffold na na BAMO01000047.1 = NZ_BAMO01000047.1 Primary Assembly 36646 na BAMO01000048.1 unplaced-scaffold na na BAMO01000048.1 = NZ_BAMO01000048.1 Primary Assembly 35805 na BAMO01000049.1 unplaced-scaffold na na BAMO01000049.1 = NZ_BAMO01000049.1 Primary Assembly 28700 na BAMO01000050.1 unplaced-scaffold na na BAMO01000050.1 = NZ_BAMO01000050.1 Primary Assembly 27018 na BAMO01000051.1 unplaced-scaffold na na BAMO01000051.1 = NZ_BAMO01000051.1 Primary Assembly 25517 na BAMO01000052.1 unplaced-scaffold na na BAMO01000052.1 = NZ_BAMO01000052.1 Primary Assembly 24792 na BAMO01000053.1 unplaced-scaffold na na BAMO01000053.1 = NZ_BAMO01000053.1 Primary Assembly 22845 na BAMO01000054.1 unplaced-scaffold na na BAMO01000054.1 = NZ_BAMO01000054.1 Primary Assembly 19690 na BAMO01000055.1 unplaced-scaffold na na BAMO01000055.1 = NZ_BAMO01000055.1 Primary Assembly 18922 na BAMO01000056.1 unplaced-scaffold na na BAMO01000056.1 = NZ_BAMO01000056.1 Primary Assembly 17762 na BAMO01000057.1 unplaced-scaffold na na BAMO01000057.1 = NZ_BAMO01000057.1 Primary Assembly 17043 na BAMO01000058.1 unplaced-scaffold na na BAMO01000058.1 = NZ_BAMO01000058.1 Primary Assembly 16627 na BAMO01000059.1 unplaced-scaffold na na BAMO01000059.1 = NZ_BAMO01000059.1 Primary Assembly 16487 na BAMO01000060.1 unplaced-scaffold na na BAMO01000060.1 = NZ_BAMO01000060.1 Primary Assembly 16140 na BAMO01000061.1 unplaced-scaffold na na BAMO01000061.1 = NZ_BAMO01000061.1 Primary Assembly 15860 na BAMO01000062.1 unplaced-scaffold na na BAMO01000062.1 = NZ_BAMO01000062.1 Primary Assembly 14733 na BAMO01000063.1 unplaced-scaffold na na BAMO01000063.1 = NZ_BAMO01000063.1 Primary Assembly 14021 na BAMO01000064.1 unplaced-scaffold na na BAMO01000064.1 = NZ_BAMO01000064.1 Primary Assembly 13346 na BAMO01000065.1 unplaced-scaffold na na BAMO01000065.1 = NZ_BAMO01000065.1 Primary Assembly 13244 na BAMO01000066.1 unplaced-scaffold na na BAMO01000066.1 = NZ_BAMO01000066.1 Primary Assembly 12683 na BAMO01000067.1 unplaced-scaffold na na BAMO01000067.1 = NZ_BAMO01000067.1 Primary Assembly 12493 na BAMO01000068.1 unplaced-scaffold na na BAMO01000068.1 = NZ_BAMO01000068.1 Primary Assembly 12158 na BAMO01000069.1 unplaced-scaffold na na BAMO01000069.1 = NZ_BAMO01000069.1 Primary Assembly 11951 na BAMO01000070.1 unplaced-scaffold na na BAMO01000070.1 = NZ_BAMO01000070.1 Primary Assembly 7784 na BAMO01000071.1 unplaced-scaffold na na BAMO01000071.1 = NZ_BAMO01000071.1 Primary Assembly 7597 na BAMO01000072.1 unplaced-scaffold na na BAMO01000072.1 = NZ_BAMO01000072.1 Primary Assembly 6745 na BAMO01000073.1 unplaced-scaffold na na BAMO01000073.1 = NZ_BAMO01000073.1 Primary Assembly 6684 na BAMO01000074.1 unplaced-scaffold na na BAMO01000074.1 = NZ_BAMO01000074.1 Primary Assembly 5526 na BAMO01000075.1 unplaced-scaffold na na BAMO01000075.1 = NZ_BAMO01000075.1 Primary Assembly 5179 na BAMO01000076.1 unplaced-scaffold na na BAMO01000076.1 = NZ_BAMO01000076.1 Primary Assembly 4842 na BAMO01000077.1 unplaced-scaffold na na BAMO01000077.1 = NZ_BAMO01000077.1 Primary Assembly 3978 na BAMO01000078.1 unplaced-scaffold na na BAMO01000078.1 = NZ_BAMO01000078.1 Primary Assembly 3900 na BAMO01000079.1 unplaced-scaffold na na BAMO01000079.1 = NZ_BAMO01000079.1 Primary Assembly 3517 na BAMO01000080.1 unplaced-scaffold na na BAMO01000080.1 = NZ_BAMO01000080.1 Primary Assembly 3301 na BAMO01000081.1 unplaced-scaffold na na BAMO01000081.1 = NZ_BAMO01000081.1 Primary Assembly 3099 na BAMO01000082.1 unplaced-scaffold na na BAMO01000082.1 = NZ_BAMO01000082.1 Primary Assembly 2883 na BAMO01000083.1 unplaced-scaffold na na BAMO01000083.1 = NZ_BAMO01000083.1 Primary Assembly 2564 na BAMO01000084.1 unplaced-scaffold na na BAMO01000084.1 = NZ_BAMO01000084.1 Primary Assembly 2446 na BAMO01000085.1 unplaced-scaffold na na BAMO01000085.1 = NZ_BAMO01000085.1 Primary Assembly 2366 na BAMO01000086.1 unplaced-scaffold na na BAMO01000086.1 = NZ_BAMO01000086.1 Primary Assembly 1769 na BAMO01000087.1 unplaced-scaffold na na BAMO01000087.1 = NZ_BAMO01000087.1 Primary Assembly 1731 na BAMO01000088.1 unplaced-scaffold na na BAMO01000088.1 = NZ_BAMO01000088.1 Primary Assembly 1593 na BAMO01000089.1 unplaced-scaffold na na BAMO01000089.1 = NZ_BAMO01000089.1 Primary Assembly 1474 na BAMO01000090.1 unplaced-scaffold na na BAMO01000090.1 = NZ_BAMO01000090.1 Primary Assembly 1457 na BAMO01000091.1 unplaced-scaffold na na BAMO01000091.1 = NZ_BAMO01000091.1 Primary Assembly 1408 na BAMO01000092.1 unplaced-scaffold na na BAMO01000092.1 = NZ_BAMO01000092.1 Primary Assembly 1323 na BAMO01000093.1 unplaced-scaffold na na BAMO01000093.1 = NZ_BAMO01000093.1 Primary Assembly 1205 na BAMO01000094.1 unplaced-scaffold na na BAMO01000094.1 = NZ_BAMO01000094.1 Primary Assembly 1195 na BAMO01000095.1 unplaced-scaffold na na BAMO01000095.1 = NZ_BAMO01000095.1 Primary Assembly 1152 na BAMO01000096.1 unplaced-scaffold na na BAMO01000096.1 = NZ_BAMO01000096.1 Primary Assembly 1055 na BAMO01000097.1 unplaced-scaffold na na BAMO01000097.1 = NZ_BAMO01000097.1 Primary Assembly 944 na BAMO01000098.1 unplaced-scaffold na na BAMO01000098.1 = NZ_BAMO01000098.1 Primary Assembly 931 na BAMO01000099.1 unplaced-scaffold na na BAMO01000099.1 = NZ_BAMO01000099.1 Primary Assembly 910 na BAMO01000100.1 unplaced-scaffold na na BAMO01000100.1 = NZ_BAMO01000100.1 Primary Assembly 846 na BAMO01000101.1 unplaced-scaffold na na BAMO01000101.1 = NZ_BAMO01000101.1 Primary Assembly 755 na BAMO01000102.1 unplaced-scaffold na na BAMO01000102.1 = NZ_BAMO01000102.1 Primary Assembly 737 na BAMO01000103.1 unplaced-scaffold na na BAMO01000103.1 = NZ_BAMO01000103.1 Primary Assembly 727 na BAMO01000104.1 unplaced-scaffold na na BAMO01000104.1 = NZ_BAMO01000104.1 Primary Assembly 713 na BAMO01000105.1 unplaced-scaffold na na BAMO01000105.1 = NZ_BAMO01000105.1 Primary Assembly 705 na BAMO01000106.1 unplaced-scaffold na na BAMO01000106.1 = NZ_BAMO01000106.1 Primary Assembly 674 na BAMO01000107.1 unplaced-scaffold na na BAMO01000107.1 = NZ_BAMO01000107.1 Primary Assembly 603 na BAMO01000108.1 unplaced-scaffold na na BAMO01000108.1 = NZ_BAMO01000108.1 Primary Assembly 595 na