# Assembly name: ASM62148v1 # Organism name: Alkaliphilus transvaalensis ATCC 700919 (firmicutes) # Infraspecific name: strain=ATCC 700919 # Taxid: 1408422 # BioSample: SAMN02743997 # BioProject: PRJNA223027 # Submitter: DOE Joint Genome Institute # Date: 2014-04-08 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: JHYF01 # Assembly method: vpAllpaths v. r46652 # Genome coverage: Unknown # Sequencing technology: Illumina HiSeq 2000 # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_000621485.1 # RefSeq assembly accession: GCF_000621485.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_000621495.1 GCF_000621495.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name T335DRAFT_scaffold00001.1 unplaced-scaffold na na JHYF01000001.1 = NZ_JHYF01000001.1 Primary Assembly 481068 na T335DRAFT_scaffold00002.2 unplaced-scaffold na na JHYF01000002.1 = NZ_JHYF01000002.1 Primary Assembly 446976 na T335DRAFT_scaffold00003.3 unplaced-scaffold na na JHYF01000003.1 = NZ_JHYF01000003.1 Primary Assembly 346588 na T335DRAFT_scaffold00005.5 unplaced-scaffold na na JHYF01000006.1 = NZ_JHYF01000006.1 Primary Assembly 314517 na T335DRAFT_scaffold00007.7 unplaced-scaffold na na JHYF01000009.1 = NZ_JHYF01000009.1 Primary Assembly 262265 na T335DRAFT_scaffold00009.9 unplaced-scaffold na na JHYF01000012.1 = NZ_JHYF01000012.1 Primary Assembly 191320 na T335DRAFT_scaffold00010.10 unplaced-scaffold na na JHYF01000013.1 = NZ_JHYF01000013.1 Primary Assembly 171452 na T335DRAFT_scaffold00011.11 unplaced-scaffold na na JHYF01000014.1 = NZ_JHYF01000014.1 Primary Assembly 167561 na T335DRAFT_scaffold00012.12 unplaced-scaffold na na JHYF01000015.1 = NZ_JHYF01000015.1 Primary Assembly 159942 na T335DRAFT_scaffold00013.13 unplaced-scaffold na na JHYF01000016.1 = NZ_JHYF01000016.1 Primary Assembly 130578 na T335DRAFT_scaffold00014.14 unplaced-scaffold na na JHYF01000017.1 = NZ_JHYF01000017.1 Primary Assembly 130363 na T335DRAFT_scaffold00015.15 unplaced-scaffold na na JHYF01000018.1 = NZ_JHYF01000018.1 Primary Assembly 63792 na T335DRAFT_scaffold00016.16 unplaced-scaffold na na JHYF01000019.1 = NZ_JHYF01000019.1 Primary Assembly 56377 na T335DRAFT_scaffold00017.17 unplaced-scaffold na na JHYF01000020.1 = NZ_JHYF01000020.1 Primary Assembly 45001 na T335DRAFT_scaffold00018.18 unplaced-scaffold na na JHYF01000021.1 = NZ_JHYF01000021.1 Primary Assembly 40523 na T335DRAFT_scaffold00019.19 unplaced-scaffold na na JHYF01000022.1 = NZ_JHYF01000022.1 Primary Assembly 20714 na T335DRAFT_scaffold00020.20 unplaced-scaffold na na JHYF01000023.1 = NZ_JHYF01000023.1 Primary Assembly 19878 na T335DRAFT_scaffold00021.21 unplaced-scaffold na na JHYF01000024.1 = NZ_JHYF01000024.1 Primary Assembly 18630 na T335DRAFT_scaffold00022.22 unplaced-scaffold na na JHYF01000025.1 = NZ_JHYF01000025.1 Primary Assembly 16246 na T335DRAFT_scaffold00023.23 unplaced-scaffold na na JHYF01000026.1 = NZ_JHYF01000026.1 Primary Assembly 15714 na T335DRAFT_scaffold00024.24 unplaced-scaffold na na JHYF01000027.1 = NZ_JHYF01000027.1 Primary Assembly 11173 na T335DRAFT_scaffold00025.25 unplaced-scaffold na na JHYF01000028.1 = NZ_JHYF01000028.1 Primary Assembly 10005 na T335DRAFT_scaffold00026.26 unplaced-scaffold na na JHYF01000029.1 = NZ_JHYF01000029.1 Primary Assembly 9808 na T335DRAFT_scaffold00027.27 unplaced-scaffold na na JHYF01000030.1 = NZ_JHYF01000030.1 Primary Assembly 7100 na T335DRAFT_scaffold00028.28 unplaced-scaffold na na JHYF01000031.1 = NZ_JHYF01000031.1 Primary Assembly 2840 na T335DRAFT_scaffold00029.29 unplaced-scaffold na na JHYF01000032.1 = NZ_JHYF01000032.1 Primary Assembly 2993 na T335DRAFT_scaffold00030.30 unplaced-scaffold na na JHYF01000033.1 = NZ_JHYF01000033.1 Primary Assembly 2403 na T335DRAFT_scaffold00031.31 unplaced-scaffold na na JHYF01000034.1 = NZ_JHYF01000034.1 Primary Assembly 1760 na T335DRAFT_scaffold00032.32 unplaced-scaffold na na JHYF01000035.1 = NZ_JHYF01000035.1 Primary Assembly 1725 na T335DRAFT_scaffold00033.33 unplaced-scaffold na na JHYF01000036.1 = NZ_JHYF01000036.1 Primary Assembly 1466 na T335DRAFT_scaffold00034.34 unplaced-scaffold na na JHYF01000037.1 = NZ_JHYF01000037.1 Primary Assembly 1452 na T335DRAFT_scaffold00035.35 unplaced-scaffold na na JHYF01000038.1 = NZ_JHYF01000038.1 Primary Assembly 1439 na T335DRAFT_scaffold00036.36 unplaced-scaffold na na JHYF01000039.1 = NZ_JHYF01000039.1 Primary Assembly 1387 na T335DRAFT_scaffold00037.37 unplaced-scaffold na na JHYF01000040.1 = NZ_JHYF01000040.1 Primary Assembly 1382 na T335DRAFT_scaffold00038.38 unplaced-scaffold na na JHYF01000041.1 = NZ_JHYF01000041.1 Primary Assembly 1339 na T335DRAFT_scaffold00039.39 unplaced-scaffold na na JHYF01000042.1 = NZ_JHYF01000042.1 Primary Assembly 1262 na T335DRAFT_scaffold00040.40 unplaced-scaffold na na JHYF01000043.1 = NZ_JHYF01000043.1 Primary Assembly 1243 na T335DRAFT_scaffold00041.41 unplaced-scaffold na na JHYF01000044.1 = NZ_JHYF01000044.1 Primary Assembly 1067 na T335DRAFT_scaffold00042.42 unplaced-scaffold na na JHYF01000045.1 = NZ_JHYF01000045.1 Primary Assembly 1059 na T335DRAFT_scaffold00043.43 unplaced-scaffold na na JHYF01000046.1 = NZ_JHYF01000046.1 Primary Assembly 1050 na T335DRAFT_scaffold00044.44 unplaced-scaffold na na JHYF01000047.1 = NZ_JHYF01000047.1 Primary Assembly 1009 na T335DRAFT_scaffold00004.4 unplaced-scaffold na na KK211286.1 = NZ_KK211286.1 Primary Assembly 329833 na T335DRAFT_scaffold00006.6 unplaced-scaffold na na KK211287.1 = NZ_KK211287.1 Primary Assembly 279476 na T335DRAFT_scaffold00008.8 unplaced-scaffold na na KK211288.1 = NZ_KK211288.1 Primary Assembly 251062 na