# Assembly name: SOAPdenovo v1.05 # Organism name: Hyphomonas pacifica (a-proteobacteria) # Infraspecific name: strain=T16B2 # Taxid: 1280941 # BioSample: SAMN02746324 # BioProject: PRJNA186148 # Submitter: The Third Institute of State Oceanic Administration (SOA) # Date: 2014-05-06 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: AWFA01 # Assembly method: SOAPdenovo v. 1.05 # Expected final version: yes # Genome coverage: 254.0x # Sequencing technology: Illumina HiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_000682675.1 # RefSeq assembly accession: GCF_000682675.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_000682685.1 GCF_000682685.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name contig1 unplaced-scaffold na na AWFA01000001.1 = NZ_AWFA01000001.1 Primary Assembly 229697 na contig10 unplaced-scaffold na na AWFA01000002.1 = NZ_AWFA01000002.1 Primary Assembly 100310 na contig11 unplaced-scaffold na na AWFA01000003.1 = NZ_AWFA01000003.1 Primary Assembly 99294 na contig12 unplaced-scaffold na na AWFA01000004.1 = NZ_AWFA01000004.1 Primary Assembly 92913 na contig13 unplaced-scaffold na na AWFA01000005.1 = NZ_AWFA01000005.1 Primary Assembly 92412 na contig14 unplaced-scaffold na na AWFA01000006.1 = NZ_AWFA01000006.1 Primary Assembly 89777 na contig15 unplaced-scaffold na na AWFA01000007.1 = NZ_AWFA01000007.1 Primary Assembly 85057 na contig16 unplaced-scaffold na na AWFA01000008.1 = NZ_AWFA01000008.1 Primary Assembly 80172 na contig17 unplaced-scaffold na na AWFA01000009.1 = NZ_AWFA01000009.1 Primary Assembly 74925 na contig18 unplaced-scaffold na na AWFA01000010.1 = NZ_AWFA01000010.1 Primary Assembly 72078 na contig19 unplaced-scaffold na na AWFA01000011.1 = NZ_AWFA01000011.1 Primary Assembly 65107 na contig2 unplaced-scaffold na na AWFA01000012.1 = NZ_AWFA01000012.1 Primary Assembly 206523 na contig20 unplaced-scaffold na na AWFA01000013.1 = NZ_AWFA01000013.1 Primary Assembly 61969 na contig21 unplaced-scaffold na na AWFA01000014.1 = NZ_AWFA01000014.1 Primary Assembly 58823 na contig22 unplaced-scaffold na na AWFA01000015.1 = NZ_AWFA01000015.1 Primary Assembly 57470 na contig23 unplaced-scaffold na na AWFA01000016.1 = NZ_AWFA01000016.1 Primary Assembly 55852 na contig24 unplaced-scaffold na na AWFA01000017.1 = NZ_AWFA01000017.1 Primary Assembly 52861 na contig25 unplaced-scaffold na na AWFA01000018.1 = NZ_AWFA01000018.1 Primary Assembly 44971 na contig26 unplaced-scaffold na na AWFA01000019.1 = NZ_AWFA01000019.1 Primary Assembly 42207 na contig27 unplaced-scaffold na na AWFA01000020.1 = NZ_AWFA01000020.1 Primary Assembly 39243 na contig28 unplaced-scaffold na na AWFA01000021.1 = NZ_AWFA01000021.1 Primary Assembly 39072 na contig29 unplaced-scaffold na na AWFA01000022.1 = NZ_AWFA01000022.1 Primary Assembly 37289 na contig3 unplaced-scaffold na na AWFA01000023.1 = NZ_AWFA01000023.1 Primary Assembly 191883 na contig30 unplaced-scaffold na na AWFA01000024.1 = NZ_AWFA01000024.1 Primary Assembly 36672 na contig31 unplaced-scaffold na na AWFA01000025.1 = NZ_AWFA01000025.1 Primary Assembly 35055 na contig32 unplaced-scaffold na na AWFA01000026.1 = NZ_AWFA01000026.1 Primary Assembly 34409 na contig33 unplaced-scaffold na na AWFA01000027.1 = NZ_AWFA01000027.1 Primary Assembly 34204 na contig34 unplaced-scaffold na na AWFA01000028.1 = NZ_AWFA01000028.1 Primary Assembly 33847 na contig35 unplaced-scaffold na na AWFA01000029.1 = NZ_AWFA01000029.1 Primary Assembly 33212 na contig36 unplaced-scaffold na na AWFA01000030.1 = NZ_AWFA01000030.1 Primary Assembly 32671 na contig37 unplaced-scaffold na na AWFA01000031.1 = NZ_AWFA01000031.1 Primary Assembly 28290 na contig38 unplaced-scaffold na na AWFA01000032.1 = NZ_AWFA01000032.1 Primary Assembly 27586 na contig39 unplaced-scaffold na na AWFA01000033.1 = NZ_AWFA01000033.1 Primary Assembly 25296 na contig4 unplaced-scaffold na na AWFA01000034.1 = NZ_AWFA01000034.1 Primary Assembly 169219 na contig40 unplaced-scaffold na na AWFA01000035.1 = NZ_AWFA01000035.1 Primary Assembly 24389 na contig41 unplaced-scaffold na na AWFA01000036.1 = NZ_AWFA01000036.1 Primary Assembly 23699 na contig42 unplaced-scaffold na na AWFA01000037.1 = NZ_AWFA01000037.1 Primary Assembly 22028 na contig43 unplaced-scaffold na na AWFA01000038.1 = NZ_AWFA01000038.1 Primary Assembly 21866 na contig44 unplaced-scaffold na na AWFA01000039.1 = NZ_AWFA01000039.1 Primary Assembly 21156 na contig45 unplaced-scaffold na na AWFA01000040.1 = NZ_AWFA01000040.1 Primary Assembly 19577 na contig46 unplaced-scaffold na na AWFA01000041.1 = NZ_AWFA01000041.1 Primary Assembly 19502 na contig47 unplaced-scaffold na na AWFA01000042.1 = NZ_AWFA01000042.1 Primary Assembly 18898 na contig48 unplaced-scaffold na na AWFA01000043.1 = NZ_AWFA01000043.1 Primary Assembly 18046 na contig49 unplaced-scaffold na na AWFA01000044.1 = NZ_AWFA01000044.1 Primary Assembly 17041 na contig5 unplaced-scaffold na na AWFA01000045.1 = NZ_AWFA01000045.1 Primary Assembly 131136 na contig50 unplaced-scaffold na na AWFA01000046.1 = NZ_AWFA01000046.1 Primary Assembly 16619 na contig51 unplaced-scaffold na na AWFA01000047.1 = NZ_AWFA01000047.1 Primary Assembly 16286 na contig52 unplaced-scaffold na na AWFA01000048.1 = NZ_AWFA01000048.1 Primary Assembly 14851 na contig53 unplaced-scaffold na na AWFA01000049.1 = NZ_AWFA01000049.1 Primary Assembly 13227 na contig54 unplaced-scaffold na na AWFA01000050.1 = NZ_AWFA01000050.1 Primary Assembly 11657 na contig55 unplaced-scaffold na na AWFA01000051.1 = NZ_AWFA01000051.1 Primary Assembly 9337 na contig56 unplaced-scaffold na na AWFA01000052.1 = NZ_AWFA01000052.1 Primary Assembly 7217 na contig57 unplaced-scaffold na na AWFA01000053.1 = NZ_AWFA01000053.1 Primary Assembly 7162 na contig58 unplaced-scaffold na na AWFA01000054.1 = NZ_AWFA01000054.1 Primary Assembly 6495 na contig59 unplaced-scaffold na na AWFA01000055.1 = NZ_AWFA01000055.1 Primary Assembly 6450 na contig6 unplaced-scaffold na na AWFA01000056.1 = NZ_AWFA01000056.1 Primary Assembly 129461 na contig60 unplaced-scaffold na na AWFA01000057.1 = NZ_AWFA01000057.1 Primary Assembly 6243 na contig61 unplaced-scaffold na na AWFA01000058.1 = NZ_AWFA01000058.1 Primary Assembly 5518 na contig62 unplaced-scaffold na na AWFA01000059.1 = NZ_AWFA01000059.1 Primary Assembly 4292 na contig63 unplaced-scaffold na na AWFA01000060.1 = NZ_AWFA01000060.1 Primary Assembly 4257 na contig64 unplaced-scaffold na na AWFA01000061.1 = NZ_AWFA01000061.1 Primary Assembly 4127 na contig65 unplaced-scaffold na na AWFA01000062.1 = NZ_AWFA01000062.1 Primary Assembly 3875 na contig66 unplaced-scaffold na na AWFA01000063.1 = NZ_AWFA01000063.1 Primary Assembly 3287 na contig67 unplaced-scaffold na na AWFA01000064.1 = NZ_AWFA01000064.1 Primary Assembly 2637 na contig68 unplaced-scaffold na na AWFA01000065.1 = NZ_AWFA01000065.1 Primary Assembly 2636 na contig69 unplaced-scaffold na na AWFA01000066.1 = NZ_AWFA01000066.1 Primary Assembly 2121 na contig7 unplaced-scaffold na na AWFA01000067.1 = NZ_AWFA01000067.1 Primary Assembly 114298 na contig70 unplaced-scaffold na na AWFA01000068.1 = NZ_AWFA01000068.1 Primary Assembly 2092 na contig71 unplaced-scaffold na na AWFA01000069.1 = NZ_AWFA01000069.1 Primary Assembly 1697 na contig72 unplaced-scaffold na na AWFA01000070.1 = NZ_AWFA01000070.1 Primary Assembly 1586 na contig73 unplaced-scaffold na na AWFA01000071.1 = NZ_AWFA01000071.1 Primary Assembly 1500 na contig74 unplaced-scaffold na na AWFA01000072.1 = NZ_AWFA01000072.1 Primary Assembly 1496 na contig75 unplaced-scaffold na na AWFA01000073.1 = NZ_AWFA01000073.1 Primary Assembly 1380 na contig76 unplaced-scaffold na na AWFA01000074.1 = NZ_AWFA01000074.1 Primary Assembly 1268 na contig77 unplaced-scaffold na na AWFA01000075.1 = NZ_AWFA01000075.1 Primary Assembly 1259 na contig78 unplaced-scaffold na na AWFA01000076.1 = NZ_AWFA01000076.1 Primary Assembly 1058 na contig79 unplaced-scaffold na na AWFA01000077.1 = NZ_AWFA01000077.1 Primary Assembly 944 na contig8 unplaced-scaffold na na AWFA01000078.1 = NZ_AWFA01000078.1 Primary Assembly 106270 na contig80 unplaced-scaffold na na AWFA01000079.1 = NZ_AWFA01000079.1 Primary Assembly 920 na contig81 unplaced-scaffold na na AWFA01000080.1 = NZ_AWFA01000080.1 Primary Assembly 905 na contig82 unplaced-scaffold na na AWFA01000081.1 = NZ_AWFA01000081.1 Primary Assembly 528 na contig83 unplaced-scaffold na na AWFA01000082.1 = NZ_AWFA01000082.1 Primary Assembly 467 na contig84 unplaced-scaffold na na AWFA01000083.1 = NZ_AWFA01000083.1 Primary Assembly 375 na contig85 unplaced-scaffold na na AWFA01000084.1 = NZ_AWFA01000084.1 Primary Assembly 322 na contig86 unplaced-scaffold na na AWFA01000085.1 = NZ_AWFA01000085.1 Primary Assembly 297 na contig87 unplaced-scaffold na na AWFA01000086.1 = NZ_AWFA01000086.1 Primary Assembly 297 na contig88 unplaced-scaffold na na AWFA01000087.1 = NZ_AWFA01000087.1 Primary Assembly 284 na contig89 unplaced-scaffold na na AWFA01000088.1 = NZ_AWFA01000088.1 Primary Assembly 270 na contig9 unplaced-scaffold na na AWFA01000089.1 = NZ_AWFA01000089.1 Primary Assembly 102778 na contig90 unplaced-scaffold na na AWFA01000090.1 = NZ_AWFA01000090.1 Primary Assembly 257 na contig91 unplaced-scaffold na na AWFA01000091.1 = NZ_AWFA01000091.1 Primary Assembly 256 na contig92 unplaced-scaffold na na AWFA01000092.1 = NZ_AWFA01000092.1 Primary Assembly 233 na contig93 unplaced-scaffold na na AWFA01000093.1 = NZ_AWFA01000093.1 Primary Assembly 201 na