# Assembly name: SOAPdenovo v1.05 # Organism name: Hyphomonas beringensis (a-proteobacteria) # Infraspecific name: strain=25B14_1 # Taxid: 1280946 # BioSample: SAMN02746321 # BioProject: PRJNA186158 # Submitter: The Third Institute of State Oceanic Administration (SOA) # Date: 2014-05-06 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: AWFF01 # Assembly method: SOAPdenovo v. 1.05 # Expected final version: yes # Genome coverage: 356.0x # Sequencing technology: Illumina HiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_000682755.1 # RefSeq assembly accession: GCF_000682755.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_000682765.1 GCF_000682765.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name contig1 unplaced-scaffold na na AWFF01000001.1 = NZ_AWFF01000001.1 Primary Assembly 317528 na contig10 unplaced-scaffold na na AWFF01000002.1 = NZ_AWFF01000002.1 Primary Assembly 122967 na contig100 unplaced-scaffold na na AWFF01000003.1 = NZ_AWFF01000003.1 Primary Assembly 298 na contig101 unplaced-scaffold na na AWFF01000004.1 = NZ_AWFF01000004.1 Primary Assembly 287 na contig102 unplaced-scaffold na na AWFF01000005.1 = NZ_AWFF01000005.1 Primary Assembly 286 na contig103 unplaced-scaffold na na AWFF01000006.1 = NZ_AWFF01000006.1 Primary Assembly 284 na contig104 unplaced-scaffold na na AWFF01000007.1 = NZ_AWFF01000007.1 Primary Assembly 280 na contig105 unplaced-scaffold na na AWFF01000008.1 = NZ_AWFF01000008.1 Primary Assembly 273 na contig106 unplaced-scaffold na na AWFF01000009.1 = NZ_AWFF01000009.1 Primary Assembly 267 na contig107 unplaced-scaffold na na AWFF01000010.1 = NZ_AWFF01000010.1 Primary Assembly 256 na contig108 unplaced-scaffold na na AWFF01000011.1 = NZ_AWFF01000011.1 Primary Assembly 245 na contig109 unplaced-scaffold na na AWFF01000012.1 = NZ_AWFF01000012.1 Primary Assembly 244 na contig11 unplaced-scaffold na na AWFF01000013.1 = NZ_AWFF01000013.1 Primary Assembly 116783 na contig110 unplaced-scaffold na na AWFF01000014.1 = NZ_AWFF01000014.1 Primary Assembly 239 na contig111 unplaced-scaffold na na AWFF01000015.1 = NZ_AWFF01000015.1 Primary Assembly 237 na contig112 unplaced-scaffold na na AWFF01000016.1 = NZ_AWFF01000016.1 Primary Assembly 234 na contig113 unplaced-scaffold na na AWFF01000017.1 = NZ_AWFF01000017.1 Primary Assembly 232 na contig114 unplaced-scaffold na na AWFF01000018.1 = NZ_AWFF01000018.1 Primary Assembly 230 na contig115 unplaced-scaffold na na AWFF01000019.1 = NZ_AWFF01000019.1 Primary Assembly 226 na contig116 unplaced-scaffold na na AWFF01000020.1 = NZ_AWFF01000020.1 Primary Assembly 221 na contig117 unplaced-scaffold na na AWFF01000021.1 = NZ_AWFF01000021.1 Primary Assembly 216 na contig118 unplaced-scaffold na na AWFF01000022.1 = NZ_AWFF01000022.1 Primary Assembly 215 na contig119 unplaced-scaffold na na AWFF01000023.1 = NZ_AWFF01000023.1 Primary Assembly 210 na contig12 unplaced-scaffold na na AWFF01000024.1 = NZ_AWFF01000024.1 Primary Assembly 115390 na contig13 unplaced-scaffold na na AWFF01000025.1 = NZ_AWFF01000025.1 Primary Assembly 113680 na contig14 unplaced-scaffold na na AWFF01000026.1 = NZ_AWFF01000026.1 Primary Assembly 110104 na contig15 unplaced-scaffold na na AWFF01000027.1 = NZ_AWFF01000027.1 Primary Assembly 108489 na contig16 unplaced-scaffold na na AWFF01000028.1 = NZ_AWFF01000028.1 Primary Assembly 107012 na contig17 unplaced-scaffold na na AWFF01000029.1 = NZ_AWFF01000029.1 Primary Assembly 101500 na contig18 unplaced-scaffold na na AWFF01000030.1 = NZ_AWFF01000030.1 Primary Assembly 92602 na contig19 unplaced-scaffold na na AWFF01000031.1 = NZ_AWFF01000031.1 Primary Assembly 86814 na contig2 unplaced-scaffold na na AWFF01000032.1 = NZ_AWFF01000032.1 Primary Assembly 237522 na contig20 unplaced-scaffold na na AWFF01000033.1 = NZ_AWFF01000033.1 Primary Assembly 75240 na contig21 unplaced-scaffold na na AWFF01000034.1 = NZ_AWFF01000034.1 Primary Assembly 72427 na contig22 unplaced-scaffold na na AWFF01000035.1 = NZ_AWFF01000035.1 Primary Assembly 70198 na contig23 unplaced-scaffold na na AWFF01000036.1 = NZ_AWFF01000036.1 Primary Assembly 62770 na contig24 unplaced-scaffold na na AWFF01000037.1 = NZ_AWFF01000037.1 Primary Assembly 62152 na contig25 unplaced-scaffold na na AWFF01000038.1 = NZ_AWFF01000038.1 Primary Assembly 49729 na contig26 unplaced-scaffold na na AWFF01000039.1 = NZ_AWFF01000039.1 Primary Assembly 49406 na contig27 unplaced-scaffold na na AWFF01000040.1 = NZ_AWFF01000040.1 Primary Assembly 42905 na contig28 unplaced-scaffold na na AWFF01000041.1 = NZ_AWFF01000041.1 Primary Assembly 42609 na contig29 unplaced-scaffold na na AWFF01000042.1 = NZ_AWFF01000042.1 Primary Assembly 42579 na contig3 unplaced-scaffold na na AWFF01000043.1 = NZ_AWFF01000043.1 Primary Assembly 176420 na contig30 unplaced-scaffold na na AWFF01000044.1 = NZ_AWFF01000044.1 Primary Assembly 40294 na contig31 unplaced-scaffold na na AWFF01000045.1 = NZ_AWFF01000045.1 Primary Assembly 37927 na contig32 unplaced-scaffold na na AWFF01000046.1 = NZ_AWFF01000046.1 Primary Assembly 33758 na contig33 unplaced-scaffold na na AWFF01000047.1 = NZ_AWFF01000047.1 Primary Assembly 32517 na contig34 unplaced-scaffold na na AWFF01000048.1 = NZ_AWFF01000048.1 Primary Assembly 28318 na contig35 unplaced-scaffold na na AWFF01000049.1 = NZ_AWFF01000049.1 Primary Assembly 26327 na contig36 unplaced-scaffold na na AWFF01000050.1 = NZ_AWFF01000050.1 Primary Assembly 26079 na contig37 unplaced-scaffold na na AWFF01000051.1 = NZ_AWFF01000051.1 Primary Assembly 25761 na contig38 unplaced-scaffold na na AWFF01000052.1 = NZ_AWFF01000052.1 Primary Assembly 24272 na contig39 unplaced-scaffold na na AWFF01000053.1 = NZ_AWFF01000053.1 Primary Assembly 23778 na contig4 unplaced-scaffold na na AWFF01000054.1 = NZ_AWFF01000054.1 Primary Assembly 163743 na contig40 unplaced-scaffold na na AWFF01000055.1 = NZ_AWFF01000055.1 Primary Assembly 22313 na contig41 unplaced-scaffold na na AWFF01000056.1 = NZ_AWFF01000056.1 Primary Assembly 20833 na contig42 unplaced-scaffold na na AWFF01000057.1 = NZ_AWFF01000057.1 Primary Assembly 17139 na contig43 unplaced-scaffold na na AWFF01000058.1 = NZ_AWFF01000058.1 Primary Assembly 17108 na contig44 unplaced-scaffold na na AWFF01000059.1 = NZ_AWFF01000059.1 Primary Assembly 16415 na contig45 unplaced-scaffold na na AWFF01000060.1 = NZ_AWFF01000060.1 Primary Assembly 16191 na contig46 unplaced-scaffold na na AWFF01000061.1 = NZ_AWFF01000061.1 Primary Assembly 15724 na contig47 unplaced-scaffold na na AWFF01000062.1 = NZ_AWFF01000062.1 Primary Assembly 14937 na contig48 unplaced-scaffold na na AWFF01000063.1 = NZ_AWFF01000063.1 Primary Assembly 10880 na contig49 unplaced-scaffold na na AWFF01000064.1 = NZ_AWFF01000064.1 Primary Assembly 10447 na contig5 unplaced-scaffold na na AWFF01000065.1 = NZ_AWFF01000065.1 Primary Assembly 159162 na contig50 unplaced-scaffold na na AWFF01000066.1 = NZ_AWFF01000066.1 Primary Assembly 9783 na contig51 unplaced-scaffold na na AWFF01000067.1 = NZ_AWFF01000067.1 Primary Assembly 9482 na contig52 unplaced-scaffold na na AWFF01000068.1 = NZ_AWFF01000068.1 Primary Assembly 8754 na contig53 unplaced-scaffold na na AWFF01000069.1 = NZ_AWFF01000069.1 Primary Assembly 8294 na contig54 unplaced-scaffold na na AWFF01000070.1 = NZ_AWFF01000070.1 Primary Assembly 7785 na contig55 unplaced-scaffold na na AWFF01000071.1 = NZ_AWFF01000071.1 Primary Assembly 7474 na contig56 unplaced-scaffold na na AWFF01000072.1 = NZ_AWFF01000072.1 Primary Assembly 5423 na contig57 unplaced-scaffold na na AWFF01000073.1 = NZ_AWFF01000073.1 Primary Assembly 5412 na contig58 unplaced-scaffold na na AWFF01000074.1 = NZ_AWFF01000074.1 Primary Assembly 3366 na contig59 unplaced-scaffold na na AWFF01000075.1 = NZ_AWFF01000075.1 Primary Assembly 2822 na contig6 unplaced-scaffold na na AWFF01000076.1 = NZ_AWFF01000076.1 Primary Assembly 149671 na contig60 unplaced-scaffold na na AWFF01000077.1 = NZ_AWFF01000077.1 Primary Assembly 2780 na contig61 unplaced-scaffold na na AWFF01000078.1 = NZ_AWFF01000078.1 Primary Assembly 2509 na contig62 unplaced-scaffold na na AWFF01000079.1 = NZ_AWFF01000079.1 Primary Assembly 1831 na contig63 unplaced-scaffold na na AWFF01000080.1 = NZ_AWFF01000080.1 Primary Assembly 1754 na contig64 unplaced-scaffold na na AWFF01000081.1 = NZ_AWFF01000081.1 Primary Assembly 1546 na contig65 unplaced-scaffold na na AWFF01000082.1 = NZ_AWFF01000082.1 Primary Assembly 1491 na contig66 unplaced-scaffold na na AWFF01000083.1 = NZ_AWFF01000083.1 Primary Assembly 1489 na contig67 unplaced-scaffold na na AWFF01000084.1 = NZ_AWFF01000084.1 Primary Assembly 1416 na contig68 unplaced-scaffold na na AWFF01000085.1 = NZ_AWFF01000085.1 Primary Assembly 1372 na contig69 unplaced-scaffold na na AWFF01000086.1 = NZ_AWFF01000086.1 Primary Assembly 1250 na contig7 unplaced-scaffold na na AWFF01000087.1 = NZ_AWFF01000087.1 Primary Assembly 129946 na contig70 unplaced-scaffold na na AWFF01000088.1 = NZ_AWFF01000088.1 Primary Assembly 1241 na contig71 unplaced-scaffold na na AWFF01000089.1 = NZ_AWFF01000089.1 Primary Assembly 1054 na contig72 unplaced-scaffold na na AWFF01000090.1 = NZ_AWFF01000090.1 Primary Assembly 945 na contig73 unplaced-scaffold na na AWFF01000091.1 = NZ_AWFF01000091.1 Primary Assembly 897 na contig74 unplaced-scaffold na na AWFF01000092.1 = NZ_AWFF01000092.1 Primary Assembly 882 na contig75 unplaced-scaffold na na AWFF01000093.1 = NZ_AWFF01000093.1 Primary Assembly 864 na contig76 unplaced-scaffold na na AWFF01000094.1 = NZ_AWFF01000094.1 Primary Assembly 762 na contig77 unplaced-scaffold na na AWFF01000095.1 = NZ_AWFF01000095.1 Primary Assembly 619 na contig78 unplaced-scaffold na na AWFF01000096.1 = NZ_AWFF01000096.1 Primary Assembly 611 na contig79 unplaced-scaffold na na AWFF01000097.1 = NZ_AWFF01000097.1 Primary Assembly 580 na contig8 unplaced-scaffold na na AWFF01000098.1 = NZ_AWFF01000098.1 Primary Assembly 129620 na contig80 unplaced-scaffold na na AWFF01000099.1 = NZ_AWFF01000099.1 Primary Assembly 564 na contig81 unplaced-scaffold na na AWFF01000100.1 = NZ_AWFF01000100.1 Primary Assembly 542 na contig82 unplaced-scaffold na na AWFF01000101.1 = NZ_AWFF01000101.1 Primary Assembly 492 na contig83 unplaced-scaffold na na AWFF01000102.1 = NZ_AWFF01000102.1 Primary Assembly 480 na contig84 unplaced-scaffold na na AWFF01000103.1 = NZ_AWFF01000103.1 Primary Assembly 469 na contig85 unplaced-scaffold na na AWFF01000104.1 = NZ_AWFF01000104.1 Primary Assembly 467 na contig86 unplaced-scaffold na na AWFF01000105.1 = NZ_AWFF01000105.1 Primary Assembly 446 na contig87 unplaced-scaffold na na AWFF01000106.1 = NZ_AWFF01000106.1 Primary Assembly 433 na contig88 unplaced-scaffold na na AWFF01000107.1 = NZ_AWFF01000107.1 Primary Assembly 417 na contig89 unplaced-scaffold na na AWFF01000108.1 = NZ_AWFF01000108.1 Primary Assembly 402 na contig9 unplaced-scaffold na na AWFF01000109.1 = NZ_AWFF01000109.1 Primary Assembly 125248 na contig90 unplaced-scaffold na na AWFF01000110.1 = NZ_AWFF01000110.1 Primary Assembly 381 na contig91 unplaced-scaffold na na AWFF01000111.1 = NZ_AWFF01000111.1 Primary Assembly 364 na contig92 unplaced-scaffold na na AWFF01000112.1 = NZ_AWFF01000112.1 Primary Assembly 346 na contig93 unplaced-scaffold na na AWFF01000113.1 = NZ_AWFF01000113.1 Primary Assembly 345 na contig94 unplaced-scaffold na na AWFF01000114.1 = NZ_AWFF01000114.1 Primary Assembly 326 na contig95 unplaced-scaffold na na AWFF01000115.1 = NZ_AWFF01000115.1 Primary Assembly 325 na contig96 unplaced-scaffold na na AWFF01000116.1 = NZ_AWFF01000116.1 Primary Assembly 322 na contig97 unplaced-scaffold na na AWFF01000117.1 = NZ_AWFF01000117.1 Primary Assembly 322 na contig98 unplaced-scaffold na na AWFF01000118.1 = NZ_AWFF01000118.1 Primary Assembly 315 na contig99 unplaced-scaffold na na AWFF01000119.1 = NZ_AWFF01000119.1 Primary Assembly 303 na