# Assembly name: ASM68851v1 # Organism name: Afifella pfennigii DSM 17143 (a-proteobacteria) # Infraspecific name: strain=DSM 17143 # Taxid: 1120956 # BioSample: SAMN02743903 # BioProject: PRJNA221002 # Submitter: DOE Joint Genome Institute # Date: 2014-04-08 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: JHZK01 # Assembly method: vpAllpaths v. r46652 # Genome coverage: Unknown # Sequencing technology: Illumina HiSeq 2000 # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_000688515.1 # RefSeq assembly accession: GCF_000688515.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_000688525.1 GCF_000688525.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Q331DRAFT_scaffold00001.1_C unplaced-scaffold na na JHZK01000001.1 = NZ_JHZK01000001.1 Primary Assembly 411161 na Q331DRAFT_scaffold00002.2_C unplaced-scaffold na na JHZK01000002.1 = NZ_JHZK01000002.1 Primary Assembly 258484 na Q331DRAFT_scaffold00003.3_C unplaced-scaffold na na JHZK01000003.1 = NZ_JHZK01000003.1 Primary Assembly 257780 na Q331DRAFT_scaffold00004.4_C unplaced-scaffold na na JHZK01000004.1 = NZ_JHZK01000004.1 Primary Assembly 224487 na Q331DRAFT_scaffold00005.5_C unplaced-scaffold na na JHZK01000005.1 = NZ_JHZK01000005.1 Primary Assembly 178391 na Q331DRAFT_scaffold00006.6_C unplaced-scaffold na na JHZK01000006.1 = NZ_JHZK01000006.1 Primary Assembly 167209 na Q331DRAFT_scaffold00007.7_C unplaced-scaffold na na JHZK01000007.1 = NZ_JHZK01000007.1 Primary Assembly 160790 na Q331DRAFT_scaffold00008.8_C unplaced-scaffold na na JHZK01000008.1 = NZ_JHZK01000008.1 Primary Assembly 114605 na Q331DRAFT_scaffold00009.9_C unplaced-scaffold na na JHZK01000009.1 = NZ_JHZK01000009.1 Primary Assembly 103166 na Q331DRAFT_scaffold00010.10_C unplaced-scaffold na na JHZK01000010.1 = NZ_JHZK01000010.1 Primary Assembly 102055 na Q331DRAFT_scaffold00011.11_C unplaced-scaffold na na JHZK01000011.1 = NZ_JHZK01000011.1 Primary Assembly 101044 na Q331DRAFT_scaffold00012.12_C unplaced-scaffold na na JHZK01000012.1 = NZ_JHZK01000012.1 Primary Assembly 100187 na Q331DRAFT_scaffold00013.13_C unplaced-scaffold na na JHZK01000013.1 = NZ_JHZK01000013.1 Primary Assembly 88928 na Q331DRAFT_scaffold00014.14_C unplaced-scaffold na na JHZK01000014.1 = NZ_JHZK01000014.1 Primary Assembly 88192 na Q331DRAFT_scaffold00015.15_C unplaced-scaffold na na JHZK01000015.1 = NZ_JHZK01000015.1 Primary Assembly 86937 na Q331DRAFT_scaffold00016.16_C unplaced-scaffold na na JHZK01000016.1 = NZ_JHZK01000016.1 Primary Assembly 85383 na Q331DRAFT_scaffold00017.17_C unplaced-scaffold na na JHZK01000017.1 = NZ_JHZK01000017.1 Primary Assembly 77616 na Q331DRAFT_scaffold00018.18_C unplaced-scaffold na na JHZK01000018.1 = NZ_JHZK01000018.1 Primary Assembly 75631 na Q331DRAFT_scaffold00019.19_C unplaced-scaffold na na JHZK01000019.1 = NZ_JHZK01000019.1 Primary Assembly 71529 na Q331DRAFT_scaffold00020.20_C unplaced-scaffold na na JHZK01000020.1 = NZ_JHZK01000020.1 Primary Assembly 69301 na Q331DRAFT_scaffold00021.21_C unplaced-scaffold na na JHZK01000021.1 = NZ_JHZK01000021.1 Primary Assembly 62931 na Q331DRAFT_scaffold00022.22_C unplaced-scaffold na na JHZK01000022.1 = NZ_JHZK01000022.1 Primary Assembly 61937 na Q331DRAFT_scaffold00023.23_C unplaced-scaffold na na JHZK01000023.1 = NZ_JHZK01000023.1 Primary Assembly 60292 na Q331DRAFT_scaffold00024.24_C unplaced-scaffold na na JHZK01000024.1 = NZ_JHZK01000024.1 Primary Assembly 58923 na Q331DRAFT_scaffold00025.25_C unplaced-scaffold na na JHZK01000025.1 = NZ_JHZK01000025.1 Primary Assembly 57067 na Q331DRAFT_scaffold00026.26_C unplaced-scaffold na na JHZK01000026.1 = NZ_JHZK01000026.1 Primary Assembly 54647 na Q331DRAFT_scaffold00027.27_C unplaced-scaffold na na JHZK01000027.1 = NZ_JHZK01000027.1 Primary Assembly 52207 na Q331DRAFT_scaffold00028.28_C unplaced-scaffold na na JHZK01000028.1 = NZ_JHZK01000028.1 Primary Assembly 47941 na Q331DRAFT_scaffold00029.29_C unplaced-scaffold na na JHZK01000029.1 = NZ_JHZK01000029.1 Primary Assembly 46889 na Q331DRAFT_scaffold00030.30_C unplaced-scaffold na na JHZK01000030.1 = NZ_JHZK01000030.1 Primary Assembly 41541 na Q331DRAFT_scaffold00031.31_C unplaced-scaffold na na JHZK01000031.1 = NZ_JHZK01000031.1 Primary Assembly 41514 na Q331DRAFT_scaffold00032.32_C unplaced-scaffold na na JHZK01000032.1 = NZ_JHZK01000032.1 Primary Assembly 36085 na Q331DRAFT_scaffold00033.33_C unplaced-scaffold na na JHZK01000033.1 = NZ_JHZK01000033.1 Primary Assembly 33007 na Q331DRAFT_scaffold00034.34_C unplaced-scaffold na na JHZK01000034.1 = NZ_JHZK01000034.1 Primary Assembly 28970 na Q331DRAFT_scaffold00035.35_C unplaced-scaffold na na JHZK01000035.1 = NZ_JHZK01000035.1 Primary Assembly 28391 na Q331DRAFT_scaffold00036.36_C unplaced-scaffold na na JHZK01000036.1 = NZ_JHZK01000036.1 Primary Assembly 27564 na Q331DRAFT_scaffold00037.37_C unplaced-scaffold na na JHZK01000037.1 = NZ_JHZK01000037.1 Primary Assembly 26673 na Q331DRAFT_scaffold00038.38_C unplaced-scaffold na na JHZK01000038.1 = NZ_JHZK01000038.1 Primary Assembly 26174 na Q331DRAFT_scaffold00039.39_C unplaced-scaffold na na JHZK01000039.1 = NZ_JHZK01000039.1 Primary Assembly 25746 na Q331DRAFT_scaffold00040.40_C unplaced-scaffold na na JHZK01000040.1 = NZ_JHZK01000040.1 Primary Assembly 23032 na Q331DRAFT_scaffold00041.41_C unplaced-scaffold na na JHZK01000041.1 = NZ_JHZK01000041.1 Primary Assembly 22289 na Q331DRAFT_scaffold00042.42_C unplaced-scaffold na na JHZK01000042.1 = NZ_JHZK01000042.1 Primary Assembly 20392 na Q331DRAFT_scaffold00043.43_C unplaced-scaffold na na JHZK01000043.1 = NZ_JHZK01000043.1 Primary Assembly 18610 na Q331DRAFT_scaffold00044.44_C unplaced-scaffold na na JHZK01000044.1 = NZ_JHZK01000044.1 Primary Assembly 17518 na Q331DRAFT_scaffold00045.45_C unplaced-scaffold na na JHZK01000045.1 = NZ_JHZK01000045.1 Primary Assembly 17382 na Q331DRAFT_scaffold00046.46_C unplaced-scaffold na na JHZK01000046.1 = NZ_JHZK01000046.1 Primary Assembly 17030 na Q331DRAFT_scaffold00047.47_C unplaced-scaffold na na JHZK01000047.1 = NZ_JHZK01000047.1 Primary Assembly 16563 na Q331DRAFT_scaffold00048.48_C unplaced-scaffold na na JHZK01000048.1 = NZ_JHZK01000048.1 Primary Assembly 15253 na Q331DRAFT_scaffold00049.49_C unplaced-scaffold na na JHZK01000049.1 = NZ_JHZK01000049.1 Primary Assembly 9395 na Q331DRAFT_scaffold00050.50_C unplaced-scaffold na na JHZK01000050.1 = NZ_JHZK01000050.1 Primary Assembly 9304 na Q331DRAFT_scaffold00051.51_C unplaced-scaffold na na JHZK01000051.1 = NZ_JHZK01000051.1 Primary Assembly 9076 na Q331DRAFT_scaffold00052.52_C unplaced-scaffold na na JHZK01000052.1 = NZ_JHZK01000052.1 Primary Assembly 6850 na Q331DRAFT_scaffold00053.53_C unplaced-scaffold na na JHZK01000053.1 = NZ_JHZK01000053.1 Primary Assembly 5439 na Q331DRAFT_scaffold00054.54_C unplaced-scaffold na na JHZK01000054.1 = NZ_JHZK01000054.1 Primary Assembly 5272 na Q331DRAFT_scaffold00055.55_C unplaced-scaffold na na JHZK01000055.1 = NZ_JHZK01000055.1 Primary Assembly 5195 na Q331DRAFT_scaffold00056.56_C unplaced-scaffold na na JHZK01000056.1 = NZ_JHZK01000056.1 Primary Assembly 3521 na Q331DRAFT_scaffold00057.57_C unplaced-scaffold na na JHZK01000057.1 = NZ_JHZK01000057.1 Primary Assembly 3504 na Q331DRAFT_scaffold00058.58_C unplaced-scaffold na na JHZK01000058.1 = NZ_JHZK01000058.1 Primary Assembly 2843 na Q331DRAFT_scaffold00059.59_C unplaced-scaffold na na JHZK01000059.1 = NZ_JHZK01000059.1 Primary Assembly 1398 na Q331DRAFT_scaffold00060.60_C unplaced-scaffold na na JHZK01000060.1 = NZ_JHZK01000060.1 Primary Assembly 1345 na