# Assembly name: Maq reference guided assembly # Organism name: Mycobacterium avium subsp. hominissuis A5 (high G+C Gram-positive bacteria) # Infraspecific name: strain=A5 # Taxid: 1160711 # BioSample: SAMN02756836 # BioProject: PRJNA88487 # Submitter: Oregon State University # Date: 2014-06-02 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: AUZQ01 # Assembly method: Velvet v. 1.2.09; Maq -reference guided v. 0.7.1 # Expected final version: yes # Reference guided assembly: NC_008595 # Genome coverage: 100.0x # Sequencing technology: Illumina HiSeq # GenBank assembly accession: GCA_000696715.1 # RefSeq assembly accession: GCF_000696715.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_000696725.1 GCF_000696725.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name contig001 unplaced-scaffold na na AUZQ01000001.1 = NZ_AUZQ01000001.1 Primary Assembly 18879 na contig002 unplaced-scaffold na na AUZQ01000002.1 = NZ_AUZQ01000002.1 Primary Assembly 131192 na contig003 unplaced-scaffold na na AUZQ01000003.1 = NZ_AUZQ01000003.1 Primary Assembly 266955 na contig004 unplaced-scaffold na na AUZQ01000004.1 = NZ_AUZQ01000004.1 Primary Assembly 263 na contig005 unplaced-scaffold na na AUZQ01000005.1 = NZ_AUZQ01000005.1 Primary Assembly 383 na contig006 unplaced-scaffold na na AUZQ01000006.1 = NZ_AUZQ01000006.1 Primary Assembly 37880 na contig007 unplaced-scaffold na na AUZQ01000007.1 = NZ_AUZQ01000007.1 Primary Assembly 110366 na contig008 unplaced-scaffold na na AUZQ01000008.1 = NZ_AUZQ01000008.1 Primary Assembly 17468 na contig009 unplaced-scaffold na na AUZQ01000009.1 = NZ_AUZQ01000009.1 Primary Assembly 104577 na contig010 unplaced-scaffold na na AUZQ01000010.1 = NZ_AUZQ01000010.1 Primary Assembly 543855 na contig011 unplaced-scaffold na na AUZQ01000011.1 = NZ_AUZQ01000011.1 Primary Assembly 40908 na contig012 unplaced-scaffold na na AUZQ01000012.1 = NZ_AUZQ01000012.1 Primary Assembly 22325 na contig013 unplaced-scaffold na na AUZQ01000013.1 = NZ_AUZQ01000013.1 Primary Assembly 24512 na contig014 unplaced-scaffold na na AUZQ01000014.1 = NZ_AUZQ01000014.1 Primary Assembly 57013 na contig015 unplaced-scaffold na na AUZQ01000015.1 = NZ_AUZQ01000015.1 Primary Assembly 804988 na contig016 unplaced-scaffold na na AUZQ01000016.1 = NZ_AUZQ01000016.1 Primary Assembly 467070 na contig017 unplaced-scaffold na na AUZQ01000017.1 = NZ_AUZQ01000017.1 Primary Assembly 412 na contig018 unplaced-scaffold na na AUZQ01000018.1 = NZ_AUZQ01000018.1 Primary Assembly 21108 na contig019 unplaced-scaffold na na AUZQ01000019.1 = NZ_AUZQ01000019.1 Primary Assembly 721 na contig020 unplaced-scaffold na na AUZQ01000020.1 = NZ_AUZQ01000020.1 Primary Assembly 38927 na contig021 unplaced-scaffold na na AUZQ01000021.1 = NZ_AUZQ01000021.1 Primary Assembly 15831 na contig022 unplaced-scaffold na na AUZQ01000022.1 = NZ_AUZQ01000022.1 Primary Assembly 27033 na contig023 unplaced-scaffold na na AUZQ01000023.1 = NZ_AUZQ01000023.1 Primary Assembly 211178 na contig024 unplaced-scaffold na na AUZQ01000024.1 = NZ_AUZQ01000024.1 Primary Assembly 3334 na contig025 unplaced-scaffold na na AUZQ01000025.1 = NZ_AUZQ01000025.1 Primary Assembly 15556 na contig026 unplaced-scaffold na na AUZQ01000026.1 = NZ_AUZQ01000026.1 Primary Assembly 1424 na contig027 unplaced-scaffold na na AUZQ01000027.1 = NZ_AUZQ01000027.1 Primary Assembly 16500 na contig028 unplaced-scaffold na na AUZQ01000028.1 = NZ_AUZQ01000028.1 Primary Assembly 507 na contig029 unplaced-scaffold na na AUZQ01000029.1 = NZ_AUZQ01000029.1 Primary Assembly 95243 na contig030 unplaced-scaffold na na AUZQ01000030.1 = NZ_AUZQ01000030.1 Primary Assembly 34785 na contig031 unplaced-scaffold na na AUZQ01000031.1 = NZ_AUZQ01000031.1 Primary Assembly 104727 na contig032 unplaced-scaffold na na AUZQ01000032.1 = NZ_AUZQ01000032.1 Primary Assembly 159469 na contig033 unplaced-scaffold na na AUZQ01000033.1 = NZ_AUZQ01000033.1 Primary Assembly 25779 na contig034 unplaced-scaffold na na AUZQ01000034.1 = NZ_AUZQ01000034.1 Primary Assembly 19815 na contig035 unplaced-scaffold na na AUZQ01000035.1 = NZ_AUZQ01000035.1 Primary Assembly 160558 na contig036 unplaced-scaffold na na AUZQ01000036.1 = NZ_AUZQ01000036.1 Primary Assembly 100127 na contig037 unplaced-scaffold na na AUZQ01000037.1 = NZ_AUZQ01000037.1 Primary Assembly 149607 na contig038 unplaced-scaffold na na AUZQ01000038.1 = NZ_AUZQ01000038.1 Primary Assembly 23800 na contig039 unplaced-scaffold na na AUZQ01000039.1 = NZ_AUZQ01000039.1 Primary Assembly 29878 na contig040 unplaced-scaffold na na AUZQ01000040.1 = NZ_AUZQ01000040.1 Primary Assembly 129162 na contig041 unplaced-scaffold na na AUZQ01000041.1 = NZ_AUZQ01000041.1 Primary Assembly 535 na contig042 unplaced-scaffold na na AUZQ01000042.1 = NZ_AUZQ01000042.1 Primary Assembly 1630 na contig043 unplaced-scaffold na na AUZQ01000043.1 = NZ_AUZQ01000043.1 Primary Assembly 3935 na contig044 unplaced-scaffold na na AUZQ01000044.1 = NZ_AUZQ01000044.1 Primary Assembly 73940 na contig045 unplaced-scaffold na na AUZQ01000045.1 = NZ_AUZQ01000045.1 Primary Assembly 342227 na contig046 unplaced-scaffold na na AUZQ01000046.1 = NZ_AUZQ01000046.1 Primary Assembly 3882 na contig047 unplaced-scaffold na na AUZQ01000047.1 = NZ_AUZQ01000047.1 Primary Assembly 4650 na contig048 unplaced-scaffold na na AUZQ01000048.1 = NZ_AUZQ01000048.1 Primary Assembly 16275 na contig049 unplaced-scaffold na na AUZQ01000049.1 = NZ_AUZQ01000049.1 Primary Assembly 18331 na contig050 unplaced-scaffold na na AUZQ01000050.1 = NZ_AUZQ01000050.1 Primary Assembly 370986 na