# Assembly name: ASM73058v1 # Organism name: Pseudomonas japonica NBRC 103040 = DSM 22348 (g-proteobacteria) # Infraspecific name: strain=NBRC 103040 # Taxid: 1215104 # BioSample: SAMD00018431 # BioProject: PRJDB212 # Submitter: National Institute of Technology and Evaluation # Date: 2014-07-10 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: BBIR01 # Assembly method: newbler v. 2.6 # Genome coverage: 91x # Sequencing technology: 454 GS-FLX Titanium; Illumina HiSeq 1000 # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_000730585.1 # RefSeq assembly accession: GCF_000730585.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_000730595.1 GCF_000730595.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name BBIR01000001.1 unplaced-scaffold na na BBIR01000001.1 = NZ_BBIR01000001.1 Primary Assembly 8638 na BBIR01000002.1 unplaced-scaffold na na BBIR01000002.1 = NZ_BBIR01000002.1 Primary Assembly 311301 na BBIR01000003.1 unplaced-scaffold na na BBIR01000003.1 = NZ_BBIR01000003.1 Primary Assembly 250409 na BBIR01000004.1 unplaced-scaffold na na BBIR01000004.1 = NZ_BBIR01000004.1 Primary Assembly 40112 na BBIR01000005.1 unplaced-scaffold na na BBIR01000005.1 = NZ_BBIR01000005.1 Primary Assembly 9279 na BBIR01000006.1 unplaced-scaffold na na BBIR01000006.1 = NZ_BBIR01000006.1 Primary Assembly 272169 na BBIR01000007.1 unplaced-scaffold na na BBIR01000007.1 = NZ_BBIR01000007.1 Primary Assembly 23329 na BBIR01000008.1 unplaced-scaffold na na BBIR01000008.1 = NZ_BBIR01000008.1 Primary Assembly 25651 na BBIR01000009.1 unplaced-scaffold na na BBIR01000009.1 = NZ_BBIR01000009.1 Primary Assembly 230693 na BBIR01000010.1 unplaced-scaffold na na BBIR01000010.1 = NZ_BBIR01000010.1 Primary Assembly 25788 na BBIR01000011.1 unplaced-scaffold na na BBIR01000011.1 = NZ_BBIR01000011.1 Primary Assembly 281483 na BBIR01000012.1 unplaced-scaffold na na BBIR01000012.1 = NZ_BBIR01000012.1 Primary Assembly 283112 na BBIR01000013.1 unplaced-scaffold na na BBIR01000013.1 = NZ_BBIR01000013.1 Primary Assembly 125558 na BBIR01000014.1 unplaced-scaffold na na BBIR01000014.1 = NZ_BBIR01000014.1 Primary Assembly 77948 na BBIR01000015.1 unplaced-scaffold na na BBIR01000015.1 = NZ_BBIR01000015.1 Primary Assembly 28838 na BBIR01000016.1 unplaced-scaffold na na BBIR01000016.1 = NZ_BBIR01000016.1 Primary Assembly 69690 na BBIR01000017.1 unplaced-scaffold na na BBIR01000017.1 = NZ_BBIR01000017.1 Primary Assembly 87020 na BBIR01000018.1 unplaced-scaffold na na BBIR01000018.1 = NZ_BBIR01000018.1 Primary Assembly 68091 na BBIR01000019.1 unplaced-scaffold na na BBIR01000019.1 = NZ_BBIR01000019.1 Primary Assembly 45708 na BBIR01000020.1 unplaced-scaffold na na BBIR01000020.1 = NZ_BBIR01000020.1 Primary Assembly 175051 na BBIR01000021.1 unplaced-scaffold na na BBIR01000021.1 = NZ_BBIR01000021.1 Primary Assembly 176956 na BBIR01000022.1 unplaced-scaffold na na BBIR01000022.1 = NZ_BBIR01000022.1 Primary Assembly 13827 na BBIR01000023.1 unplaced-scaffold na na BBIR01000023.1 = NZ_BBIR01000023.1 Primary Assembly 122614 na BBIR01000024.1 unplaced-scaffold na na BBIR01000024.1 = NZ_BBIR01000024.1 Primary Assembly 55271 na BBIR01000025.1 unplaced-scaffold na na BBIR01000025.1 = NZ_BBIR01000025.1 Primary Assembly 21224 na BBIR01000026.1 unplaced-scaffold na na BBIR01000026.1 = NZ_BBIR01000026.1 Primary Assembly 135278 na BBIR01000027.1 unplaced-scaffold na na BBIR01000027.1 = NZ_BBIR01000027.1 Primary Assembly 141800 na BBIR01000028.1 unplaced-scaffold na na BBIR01000028.1 = NZ_BBIR01000028.1 Primary Assembly 33144 na BBIR01000029.1 unplaced-scaffold na na BBIR01000029.1 = NZ_BBIR01000029.1 Primary Assembly 12763 na BBIR01000030.1 unplaced-scaffold na na BBIR01000030.1 = NZ_BBIR01000030.1 Primary Assembly 88070 na BBIR01000031.1 unplaced-scaffold na na BBIR01000031.1 = NZ_BBIR01000031.1 Primary Assembly 126167 na BBIR01000032.1 unplaced-scaffold na na BBIR01000032.1 = NZ_BBIR01000032.1 Primary Assembly 119923 na BBIR01000033.1 unplaced-scaffold na na BBIR01000033.1 = NZ_BBIR01000033.1 Primary Assembly 139319 na BBIR01000034.1 unplaced-scaffold na na BBIR01000034.1 = NZ_BBIR01000034.1 Primary Assembly 111176 na BBIR01000035.1 unplaced-scaffold na na BBIR01000035.1 = NZ_BBIR01000035.1 Primary Assembly 70683 na BBIR01000036.1 unplaced-scaffold na na BBIR01000036.1 = NZ_BBIR01000036.1 Primary Assembly 16516 na BBIR01000037.1 unplaced-scaffold na na BBIR01000037.1 = NZ_BBIR01000037.1 Primary Assembly 13877 na BBIR01000038.1 unplaced-scaffold na na BBIR01000038.1 = NZ_BBIR01000038.1 Primary Assembly 36713 na BBIR01000039.1 unplaced-scaffold na na BBIR01000039.1 = NZ_BBIR01000039.1 Primary Assembly 84645 na BBIR01000040.1 unplaced-scaffold na na BBIR01000040.1 = NZ_BBIR01000040.1 Primary Assembly 103602 na BBIR01000041.1 unplaced-scaffold na na BBIR01000041.1 = NZ_BBIR01000041.1 Primary Assembly 6354 na BBIR01000042.1 unplaced-scaffold na na BBIR01000042.1 = NZ_BBIR01000042.1 Primary Assembly 70675 na BBIR01000043.1 unplaced-scaffold na na BBIR01000043.1 = NZ_BBIR01000043.1 Primary Assembly 35589 na BBIR01000044.1 unplaced-scaffold na na BBIR01000044.1 = NZ_BBIR01000044.1 Primary Assembly 41351 na BBIR01000045.1 unplaced-scaffold na na BBIR01000045.1 = NZ_BBIR01000045.1 Primary Assembly 41288 na BBIR01000046.1 unplaced-scaffold na na BBIR01000046.1 = NZ_BBIR01000046.1 Primary Assembly 25800 na BBIR01000047.1 unplaced-scaffold na na BBIR01000047.1 = NZ_BBIR01000047.1 Primary Assembly 6800 na BBIR01000048.1 unplaced-scaffold na na BBIR01000048.1 = NZ_BBIR01000048.1 Primary Assembly 71927 na BBIR01000049.1 unplaced-scaffold na na BBIR01000049.1 = NZ_BBIR01000049.1 Primary Assembly 28262 na BBIR01000050.1 unplaced-scaffold na na BBIR01000050.1 = NZ_BBIR01000050.1 Primary Assembly 41138 na BBIR01000051.1 unplaced-scaffold na na BBIR01000051.1 = NZ_BBIR01000051.1 Primary Assembly 7410 na BBIR01000052.1 unplaced-scaffold na na BBIR01000052.1 = NZ_BBIR01000052.1 Primary Assembly 5835 na BBIR01000053.1 unplaced-scaffold na na BBIR01000053.1 = NZ_BBIR01000053.1 Primary Assembly 55900 na BBIR01000054.1 unplaced-scaffold na na BBIR01000054.1 = NZ_BBIR01000054.1 Primary Assembly 17835 na BBIR01000055.1 unplaced-scaffold na na BBIR01000055.1 = NZ_BBIR01000055.1 Primary Assembly 50166 na BBIR01000056.1 unplaced-scaffold na na BBIR01000056.1 = NZ_BBIR01000056.1 Primary Assembly 14503 na BBIR01000057.1 unplaced-scaffold na na BBIR01000057.1 = NZ_BBIR01000057.1 Primary Assembly 53159 na BBIR01000058.1 unplaced-scaffold na na BBIR01000058.1 = NZ_BBIR01000058.1 Primary Assembly 65736 na BBIR01000059.1 unplaced-scaffold na na BBIR01000059.1 = NZ_BBIR01000059.1 Primary Assembly 30503 na BBIR01000060.1 unplaced-scaffold na na BBIR01000060.1 = NZ_BBIR01000060.1 Primary Assembly 16748 na BBIR01000061.1 unplaced-scaffold na na BBIR01000061.1 = NZ_BBIR01000061.1 Primary Assembly 17892 na BBIR01000062.1 unplaced-scaffold na na BBIR01000062.1 = NZ_BBIR01000062.1 Primary Assembly 64387 na BBIR01000063.1 unplaced-scaffold na na BBIR01000063.1 = NZ_BBIR01000063.1 Primary Assembly 141380 na BBIR01000064.1 unplaced-scaffold na na BBIR01000064.1 = NZ_BBIR01000064.1 Primary Assembly 61304 na BBIR01000065.1 unplaced-scaffold na na BBIR01000065.1 = NZ_BBIR01000065.1 Primary Assembly 55564 na BBIR01000066.1 unplaced-scaffold na na BBIR01000066.1 = NZ_BBIR01000066.1 Primary Assembly 54849 na BBIR01000067.1 unplaced-scaffold na na BBIR01000067.1 = NZ_BBIR01000067.1 Primary Assembly 52807 na BBIR01000068.1 unplaced-scaffold na na BBIR01000068.1 = NZ_BBIR01000068.1 Primary Assembly 50249 na BBIR01000069.1 unplaced-scaffold na na BBIR01000069.1 = NZ_BBIR01000069.1 Primary Assembly 48985 na BBIR01000070.1 unplaced-scaffold na na BBIR01000070.1 = NZ_BBIR01000070.1 Primary Assembly 48482 na BBIR01000071.1 unplaced-scaffold na na BBIR01000071.1 = NZ_BBIR01000071.1 Primary Assembly 44401 na BBIR01000072.1 unplaced-scaffold na na BBIR01000072.1 = NZ_BBIR01000072.1 Primary Assembly 43634 na BBIR01000073.1 unplaced-scaffold na na BBIR01000073.1 = NZ_BBIR01000073.1 Primary Assembly 42323 na BBIR01000074.1 unplaced-scaffold na na BBIR01000074.1 = NZ_BBIR01000074.1 Primary Assembly 37512 na BBIR01000075.1 unplaced-scaffold na na BBIR01000075.1 = NZ_BBIR01000075.1 Primary Assembly 36743 na BBIR01000076.1 unplaced-scaffold na na BBIR01000076.1 = NZ_BBIR01000076.1 Primary Assembly 35998 na BBIR01000077.1 unplaced-scaffold na na BBIR01000077.1 = NZ_BBIR01000077.1 Primary Assembly 34781 na BBIR01000078.1 unplaced-scaffold na na BBIR01000078.1 = NZ_BBIR01000078.1 Primary Assembly 34260 na BBIR01000079.1 unplaced-scaffold na na BBIR01000079.1 = NZ_BBIR01000079.1 Primary Assembly 33373 na BBIR01000080.1 unplaced-scaffold na na BBIR01000080.1 = NZ_BBIR01000080.1 Primary Assembly 33220 na BBIR01000081.1 unplaced-scaffold na na BBIR01000081.1 = NZ_BBIR01000081.1 Primary Assembly 9920 na BBIR01000082.1 unplaced-scaffold na na BBIR01000082.1 = NZ_BBIR01000082.1 Primary Assembly 22612 na BBIR01000083.1 unplaced-scaffold na na BBIR01000083.1 = NZ_BBIR01000083.1 Primary Assembly 32191 na BBIR01000084.1 unplaced-scaffold na na BBIR01000084.1 = NZ_BBIR01000084.1 Primary Assembly 21661 na BBIR01000085.1 unplaced-scaffold na na BBIR01000085.1 = NZ_BBIR01000085.1 Primary Assembly 29009 na BBIR01000086.1 unplaced-scaffold na na BBIR01000086.1 = NZ_BBIR01000086.1 Primary Assembly 28733 na BBIR01000087.1 unplaced-scaffold na na BBIR01000087.1 = NZ_BBIR01000087.1 Primary Assembly 27361 na BBIR01000088.1 unplaced-scaffold na na BBIR01000088.1 = NZ_BBIR01000088.1 Primary Assembly 9310 na BBIR01000089.1 unplaced-scaffold na na BBIR01000089.1 = NZ_BBIR01000089.1 Primary Assembly 17848 na BBIR01000090.1 unplaced-scaffold na na BBIR01000090.1 = NZ_BBIR01000090.1 Primary Assembly 3781 na BBIR01000091.1 unplaced-scaffold na na BBIR01000091.1 = NZ_BBIR01000091.1 Primary Assembly 22559 na BBIR01000092.1 unplaced-scaffold na na BBIR01000092.1 = NZ_BBIR01000092.1 Primary Assembly 25921 na BBIR01000093.1 unplaced-scaffold na na BBIR01000093.1 = NZ_BBIR01000093.1 Primary Assembly 25631 na BBIR01000094.1 unplaced-scaffold na na BBIR01000094.1 = NZ_BBIR01000094.1 Primary Assembly 25181 na BBIR01000095.1 unplaced-scaffold na na BBIR01000095.1 = NZ_BBIR01000095.1 Primary Assembly 25115 na BBIR01000096.1 unplaced-scaffold na na BBIR01000096.1 = NZ_BBIR01000096.1 Primary Assembly 24302 na BBIR01000097.1 unplaced-scaffold na na BBIR01000097.1 = NZ_BBIR01000097.1 Primary Assembly 21811 na BBIR01000098.1 unplaced-scaffold na na BBIR01000098.1 = NZ_BBIR01000098.1 Primary Assembly 21046 na BBIR01000099.1 unplaced-scaffold na na BBIR01000099.1 = NZ_BBIR01000099.1 Primary Assembly 19716 na BBIR01000100.1 unplaced-scaffold na na BBIR01000100.1 = NZ_BBIR01000100.1 Primary Assembly 19174 na BBIR01000101.1 unplaced-scaffold na na BBIR01000101.1 = NZ_BBIR01000101.1 Primary Assembly 18879 na BBIR01000102.1 unplaced-scaffold na na BBIR01000102.1 = NZ_BBIR01000102.1 Primary Assembly 18434 na BBIR01000103.1 unplaced-scaffold na na BBIR01000103.1 = NZ_BBIR01000103.1 Primary Assembly 17723 na BBIR01000104.1 unplaced-scaffold na na BBIR01000104.1 = NZ_BBIR01000104.1 Primary Assembly 17061 na BBIR01000105.1 unplaced-scaffold na na BBIR01000105.1 = NZ_BBIR01000105.1 Primary Assembly 7731 na BBIR01000106.1 unplaced-scaffold na na BBIR01000106.1 = NZ_BBIR01000106.1 Primary Assembly 9185 na BBIR01000107.1 unplaced-scaffold na na BBIR01000107.1 = NZ_BBIR01000107.1 Primary Assembly 16484 na BBIR01000108.1 unplaced-scaffold na na BBIR01000108.1 = NZ_BBIR01000108.1 Primary Assembly 16389 na BBIR01000109.1 unplaced-scaffold na na BBIR01000109.1 = NZ_BBIR01000109.1 Primary Assembly 15151 na BBIR01000110.1 unplaced-scaffold na na BBIR01000110.1 = NZ_BBIR01000110.1 Primary Assembly 9754 na BBIR01000111.1 unplaced-scaffold na na BBIR01000111.1 = NZ_BBIR01000111.1 Primary Assembly 4964 na BBIR01000112.1 unplaced-scaffold na na BBIR01000112.1 = NZ_BBIR01000112.1 Primary Assembly 11191 na BBIR01000113.1 unplaced-scaffold na na BBIR01000113.1 = NZ_BBIR01000113.1 Primary Assembly 3425 na BBIR01000114.1 unplaced-scaffold na na BBIR01000114.1 = NZ_BBIR01000114.1 Primary Assembly 13534 na BBIR01000115.1 unplaced-scaffold na na BBIR01000115.1 = NZ_BBIR01000115.1 Primary Assembly 13388 na BBIR01000116.1 unplaced-scaffold na na BBIR01000116.1 = NZ_BBIR01000116.1 Primary Assembly 13361 na BBIR01000117.1 unplaced-scaffold na na BBIR01000117.1 = NZ_BBIR01000117.1 Primary Assembly 13331 na BBIR01000118.1 unplaced-scaffold na na BBIR01000118.1 = NZ_BBIR01000118.1 Primary Assembly 5956 na BBIR01000119.1 unplaced-scaffold na na BBIR01000119.1 = NZ_BBIR01000119.1 Primary Assembly 7129 na BBIR01000120.1 unplaced-scaffold na na BBIR01000120.1 = NZ_BBIR01000120.1 Primary Assembly 13069 na BBIR01000121.1 unplaced-scaffold na na BBIR01000121.1 = NZ_BBIR01000121.1 Primary Assembly 12654 na BBIR01000122.1 unplaced-scaffold na na BBIR01000122.1 = NZ_BBIR01000122.1 Primary Assembly 12650 na BBIR01000123.1 unplaced-scaffold na na BBIR01000123.1 = NZ_BBIR01000123.1 Primary Assembly 12166 na BBIR01000124.1 unplaced-scaffold na na BBIR01000124.1 = NZ_BBIR01000124.1 Primary Assembly 11934 na BBIR01000125.1 unplaced-scaffold na na BBIR01000125.1 = NZ_BBIR01000125.1 Primary Assembly 11566 na BBIR01000126.1 unplaced-scaffold na na BBIR01000126.1 = NZ_BBIR01000126.1 Primary Assembly 11494 na BBIR01000127.1 unplaced-scaffold na na BBIR01000127.1 = NZ_BBIR01000127.1 Primary Assembly 11057 na BBIR01000128.1 unplaced-scaffold na na BBIR01000128.1 = NZ_BBIR01000128.1 Primary Assembly 10696 na BBIR01000129.1 unplaced-scaffold na na BBIR01000129.1 = NZ_BBIR01000129.1 Primary Assembly 10205 na BBIR01000130.1 unplaced-scaffold na na BBIR01000130.1 = NZ_BBIR01000130.1 Primary Assembly 10196 na BBIR01000131.1 unplaced-scaffold na na BBIR01000131.1 = NZ_BBIR01000131.1 Primary Assembly 9588 na BBIR01000132.1 unplaced-scaffold na na BBIR01000132.1 = NZ_BBIR01000132.1 Primary Assembly 9085 na BBIR01000133.1 unplaced-scaffold na na BBIR01000133.1 = NZ_BBIR01000133.1 Primary Assembly 9001 na BBIR01000134.1 unplaced-scaffold na na BBIR01000134.1 = NZ_BBIR01000134.1 Primary Assembly 8942 na BBIR01000135.1 unplaced-scaffold na na BBIR01000135.1 = NZ_BBIR01000135.1 Primary Assembly 8261 na BBIR01000136.1 unplaced-scaffold na na BBIR01000136.1 = NZ_BBIR01000136.1 Primary Assembly 8088 na BBIR01000137.1 unplaced-scaffold na na BBIR01000137.1 = NZ_BBIR01000137.1 Primary Assembly 7944 na BBIR01000138.1 unplaced-scaffold na na BBIR01000138.1 = NZ_BBIR01000138.1 Primary Assembly 7782 na BBIR01000139.1 unplaced-scaffold na na BBIR01000139.1 = NZ_BBIR01000139.1 Primary Assembly 7396 na BBIR01000140.1 unplaced-scaffold na na BBIR01000140.1 = NZ_BBIR01000140.1 Primary Assembly 7040 na BBIR01000141.1 unplaced-scaffold na na BBIR01000141.1 = NZ_BBIR01000141.1 Primary Assembly 6679 na BBIR01000142.1 unplaced-scaffold na na BBIR01000142.1 = NZ_BBIR01000142.1 Primary Assembly 7954 na BBIR01000143.1 unplaced-scaffold na na BBIR01000143.1 = NZ_BBIR01000143.1 Primary Assembly 5928 na BBIR01000144.1 unplaced-scaffold na na BBIR01000144.1 = NZ_BBIR01000144.1 Primary Assembly 5507 na BBIR01000145.1 unplaced-scaffold na na BBIR01000145.1 = NZ_BBIR01000145.1 Primary Assembly 4895 na BBIR01000146.1 unplaced-scaffold na na BBIR01000146.1 = NZ_BBIR01000146.1 Primary Assembly 5304 na BBIR01000147.1 unplaced-scaffold na na BBIR01000147.1 = NZ_BBIR01000147.1 Primary Assembly 3098 na BBIR01000148.1 unplaced-scaffold na na BBIR01000148.1 = NZ_BBIR01000148.1 Primary Assembly 2750 na BBIR01000149.1 unplaced-scaffold na na BBIR01000149.1 = NZ_BBIR01000149.1 Primary Assembly 2630 na BBIR01000150.1 unplaced-scaffold na na BBIR01000150.1 = NZ_BBIR01000150.1 Primary Assembly 2607 na BBIR01000151.1 unplaced-scaffold na na BBIR01000151.1 = NZ_BBIR01000151.1 Primary Assembly 2493 na BBIR01000152.1 unplaced-scaffold na na BBIR01000152.1 = NZ_BBIR01000152.1 Primary Assembly 2469 na BBIR01000153.1 unplaced-scaffold na na BBIR01000153.1 = NZ_BBIR01000153.1 Primary Assembly 1876 na BBIR01000154.1 unplaced-scaffold na na BBIR01000154.1 = NZ_BBIR01000154.1 Primary Assembly 1538 na BBIR01000155.1 unplaced-scaffold na na BBIR01000155.1 = NZ_BBIR01000155.1 Primary Assembly 1316 na BBIR01000156.1 unplaced-scaffold na na BBIR01000156.1 = NZ_BBIR01000156.1 Primary Assembly 1309 na BBIR01000157.1 unplaced-scaffold na na BBIR01000157.1 = NZ_BBIR01000157.1 Primary Assembly 1275 na BBIR01000158.1 unplaced-scaffold na na BBIR01000158.1 = NZ_BBIR01000158.1 Primary Assembly 1111 na BBIR01000159.1 unplaced-scaffold na na BBIR01000159.1 = NZ_BBIR01000159.1 Primary Assembly 945 na BBIR01000160.1 unplaced-scaffold na na BBIR01000160.1 = NZ_BBIR01000160.1 Primary Assembly 885 na BBIR01000161.1 unplaced-scaffold na na BBIR01000161.1 = NZ_BBIR01000161.1 Primary Assembly 618 na BBIR01000162.1 unplaced-scaffold na na BBIR01000162.1 = NZ_BBIR01000162.1 Primary Assembly 618 na