# Assembly name: ASM73873v2 # Organism name: Corvus cornix cornix (hooded crow) # Isolate: S_Up_H32 # Sex: male # Taxid: 932674 # BioSample: SAMN02143031 # BioProject: PRJNA192205 # Submitter: Uppsala University # Date: 2017-03-08 # Assembly type: haploid # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: JPSR02 # Assembly method: AllPaths v. 41687_v2_7; IrysView v. 4.2 # Expected final version: no # Reference guided assembly: GCA_000738735.1 # Genome coverage: 150.0x # Sequencing technology: BioNano Genomics; Illumina # GenBank assembly accession: GCA_000738735.2 # RefSeq assembly accession: GCF_000738735.2 # RefSeq assembly and GenBank assemblies identical: no # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_000738745.2 GCF_000738745.2 Primary Assembly ## GCF_000738755.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Super-Scaffold_1 unplaced-scaffold na na JPSR02000001.1 = NW_018113945.1 Primary Assembly 48143371 na Super-Scaffold_2 unplaced-scaffold na na JPSR02000002.1 = NW_018113977.1 Primary Assembly 49875881 na Super-Scaffold_3 unplaced-scaffold na na JPSR02000003.1 = NW_018113989.1 Primary Assembly 34972268 na Super-Scaffold_4 unplaced-scaffold na na JPSR02000004.1 = NW_018114008.1 Primary Assembly 2874294 na Super-Scaffold_15 unplaced-scaffold na na JPSR02000005.1 = NW_018113967.1 Primary Assembly 32610611 na Super-Scaffold_26 unplaced-scaffold na na JPSR02000006.1 = NW_018113985.1 Primary Assembly 2348225 na Super-Scaffold_48 unplaced-scaffold na na JPSR02000007.1 = NW_018114016.1 Primary Assembly 1322262 na Super-Scaffold_58 unplaced-scaffold na na JPSR02000008.1 = NW_018114025.1 Primary Assembly 913301 na Super-Scaffold_68 unplaced-scaffold na na JPSR02000009.1 = NW_018114031.1 Primary Assembly 2186340 na Super-Scaffold_77 unplaced-scaffold na na JPSR02000010.1 = NW_018114038.1 Primary Assembly 1079231 na Super-Scaffold_88 unplaced-scaffold na na JPSR02000011.1 = NW_018114046.1 Primary Assembly 34159226 na Super-Scaffold_99 unplaced-scaffold na na JPSR02000012.1 = NW_018114055.1 Primary Assembly 828108 na Super-Scaffold_110 unplaced-scaffold na na JPSR02000013.1 = NW_018113951.1 Primary Assembly 56080039 na Super-Scaffold_121 unplaced-scaffold na na JPSR02000014.1 = NW_018113958.1 Primary Assembly 5308065 na Super-Scaffold_132 unplaced-scaffold na na JPSR02000015.1 = NW_018113964.1 Primary Assembly 881652 na Super-Scaffold_154 unplaced-scaffold na na JPSR02000016.1 = NW_018113969.1 Primary Assembly 794871 na Super-Scaffold_164 unplaced-scaffold na na JPSR02000017.1 = NW_018113971.1 Primary Assembly 781801 na Super-Scaffold_175 unplaced-scaffold na na JPSR02000018.1 = NW_018113974.1 Primary Assembly 1510336 na Super-Scaffold_196 unplaced-scaffold na na JPSR02000019.1 = NW_018113976.1 Primary Assembly 1073315 na Super-Scaffold_206 unplaced-scaffold na na JPSR02000020.1 = NW_018113979.1 Primary Assembly 657747 na Super-Scaffold_216 unplaced-scaffold na na JPSR02000021.1 = NW_018113980.1 Primary Assembly 21080102 na Super-Scaffold_247 unplaced-scaffold na na JPSR02000022.1 = NW_018113982.1 Primary Assembly 311092 na Super-Scaffold_257 unplaced-scaffold na na JPSR02000023.1 = NW_018113984.1 Primary Assembly 2928526 na Super-Scaffold_266 unplaced-scaffold na na JPSR02000024.1 = NW_018113986.1 Primary Assembly 1211334 na Super-Scaffold_287 unplaced-scaffold na na JPSR02000025.1 = NW_018113987.1 Primary Assembly 459928 na Super-Scaffold_296 unplaced-scaffold na na JPSR02000026.1 = NW_018113988.1 Primary Assembly 446932 na Super-Scaffold_305 unplaced-scaffold na na JPSR02000027.1 = NW_018113990.1 Primary Assembly 13878473 na Super-Scaffold_316 unplaced-scaffold na na JPSR02000028.1 = NW_018113991.1 Primary Assembly 438103 na Super-Scaffold_336 unplaced-scaffold na na JPSR02000029.1 = NW_018113992.1 Primary Assembly 6088822 na Super-Scaffold_347 unplaced-scaffold na na JPSR02000030.1 = NW_018113993.1 Primary Assembly 1169776 na Super-Scaffold_358 unplaced-scaffold na na JPSR02000031.1 = NW_018113994.1 Primary Assembly 312430 na Super-Scaffold_361 unplaced-scaffold na na JPSR02000032.1 = NW_018113995.1 Primary Assembly 249994 na Super-Scaffold_363 unplaced-scaffold na na JPSR02000033.1 = NW_018113997.1 Primary Assembly 335145 na Super-Scaffold_365 unplaced-scaffold na na JPSR02000034.1 = NW_018113998.1 Primary Assembly 17037953 na Super-Scaffold_367 unplaced-scaffold na na JPSR02000035.1 = NW_018113999.1 Primary Assembly 316453 na Super-Scaffold_368 unplaced-scaffold na na JPSR02000036.1 = NW_018114000.1 Primary Assembly 290945 na Super-Scaffold_375 unplaced-scaffold na na JPSR02000037.1 = NW_018114001.1 Primary Assembly 201996 na Super-Scaffold_376 unplaced-scaffold na na JPSR02000038.1 = NW_018114002.1 Primary Assembly 16625005 na Super-Scaffold_378 unplaced-scaffold na na JPSR02000039.1 = NW_018114003.1 Primary Assembly 44895046 na Super-Scaffold_385 unplaced-scaffold na na JPSR02000040.1 = NW_018114004.1 Primary Assembly 10592659 na Super-Scaffold_387 unplaced-scaffold na na JPSR02000041.1 = NW_018114005.1 Primary Assembly 25106506 na Super-Scaffold_389 unplaced-scaffold na na JPSR02000042.1 = NW_018114006.1 Primary Assembly 114984 na Super-Scaffold_398 unplaced-scaffold na na JPSR02000043.1 = NW_018114007.1 Primary Assembly 18356466 na Super-Scaffold_409 unplaced-scaffold na na JPSR02000044.1 = NW_018114009.1 Primary Assembly 16358221 na Super-Scaffold_420 unplaced-scaffold na na JPSR02000045.1 = NW_018114010.1 Primary Assembly 16102255 na Super-Scaffold_431 unplaced-scaffold na na JPSR02000046.1 = NW_018114011.1 Primary Assembly 1356537 na Super-Scaffold_432 unplaced-scaffold na na JPSR02000047.1 = NW_018114012.1 Primary Assembly 15837751 na Super-Scaffold_443 unplaced-scaffold na na JPSR02000048.1 = NW_018114013.1 Primary Assembly 15742219 na Super-Scaffold_465 unplaced-scaffold na na JPSR02000049.1 = NW_018114014.1 Primary Assembly 22876399 na Super-Scaffold_476 unplaced-scaffold na na JPSR02000050.1 = NW_018114015.1 Primary Assembly 13585996 na Super-Scaffold_487 unplaced-scaffold na na JPSR02000051.1 = NW_018114017.1 Primary Assembly 13511774 na Super-Scaffold_509 unplaced-scaffold na na JPSR02000052.1 = NW_018114018.1 Primary Assembly 11949049 na Super-Scaffold_520 unplaced-scaffold na na JPSR02000053.1 = NW_018114019.1 Primary Assembly 11062019 na Super-Scaffold_531 unplaced-scaffold na na JPSR02000054.1 = NW_018114020.1 Primary Assembly 10836361 na Super-Scaffold_541 unplaced-scaffold na na JPSR02000055.1 = NW_018114021.1 Primary Assembly 59109413 na Super-Scaffold_542 unplaced-scaffold na na JPSR02000056.1 = NW_018114022.1 Primary Assembly 10430895 na Super-Scaffold_564 unplaced-scaffold na na JPSR02000057.1 = NW_018114023.1 Primary Assembly 16696786 na Super-Scaffold_575 unplaced-scaffold na na JPSR02000058.1 = NW_018114024.1 Primary Assembly 8695412 na Super-Scaffold_586 unplaced-scaffold na na JPSR02000059.1 = NW_018114026.1 Primary Assembly 9133682 na Super-Scaffold_597 unplaced-scaffold na na JPSR02000060.1 = NW_018114027.1 Primary Assembly 8929206 na Super-Scaffold_652 unplaced-scaffold na na JPSR02000061.1 = NW_018114028.1 Primary Assembly 38542577 na Super-Scaffold_653 unplaced-scaffold na na JPSR02000062.1 = NW_018114029.1 Primary Assembly 8183111 na Super-Scaffold_664 unplaced-scaffold na na JPSR02000063.1 = NW_018114030.1 Primary Assembly 8041580 na Super-Scaffold_686 unplaced-scaffold na na JPSR02000064.1 = NW_018114032.1 Primary Assembly 11444433 na Super-Scaffold_697 unplaced-scaffold na na JPSR02000065.1 = NW_018114033.1 Primary Assembly 13412107 na Super-Scaffold_708 unplaced-scaffold na na JPSR02000066.1 = NW_018114034.1 Primary Assembly 413369 na Super-Scaffold_730 unplaced-scaffold na na JPSR02000067.1 = NW_018114035.1 Primary Assembly 6875625 na Super-Scaffold_741 unplaced-scaffold na na JPSR02000068.1 = NW_018114036.1 Primary Assembly 6764230 na Super-Scaffold_752 unplaced-scaffold na na JPSR02000069.1 = NW_018114037.1 Primary Assembly 6617156 na Super-Scaffold_775 unplaced-scaffold na na JPSR02000070.1 = NW_018114039.1 Primary Assembly 5922999 na Super-Scaffold_785 unplaced-scaffold na na JPSR02000071.1 = NW_018114040.1 Primary Assembly 14728348 na Super-Scaffold_818 unplaced-scaffold na na JPSR02000072.1 = NW_018114041.1 Primary Assembly 5554158 na Super-Scaffold_829 unplaced-scaffold na na JPSR02000073.1 = NW_018114042.1 Primary Assembly 5412499 na Super-Scaffold_851 unplaced-scaffold na na JPSR02000074.1 = NW_018114043.1 Primary Assembly 9623834 na Super-Scaffold_861 unplaced-scaffold na na JPSR02000075.1 = NW_018114044.1 Primary Assembly 5300858 na Super-Scaffold_873 unplaced-scaffold na na JPSR02000076.1 = NW_018114045.1 Primary Assembly 5189339 na Super-Scaffold_884 unplaced-scaffold na na JPSR02000077.1 = NW_018114047.1 Primary Assembly 4856590 na Super-Scaffold_895 unplaced-scaffold na na JPSR02000078.1 = NW_018114048.1 Primary Assembly 7050518 na Super-Scaffold_906 unplaced-scaffold na na JPSR02000079.1 = NW_018114049.1 Primary Assembly 4464258 na Super-Scaffold_917 unplaced-scaffold na na JPSR02000080.1 = NW_018114050.1 Primary Assembly 4292465 na Super-Scaffold_939 unplaced-scaffold na na JPSR02000081.1 = NW_018114051.1 Primary Assembly 3603413 na Super-Scaffold_961 unplaced-scaffold na na JPSR02000082.1 = NW_018114052.1 Primary Assembly 8408611 na Super-Scaffold_982 unplaced-scaffold na na JPSR02000083.1 = NW_018114053.1 Primary Assembly 26556330 na Super-Scaffold_983 unplaced-scaffold na na JPSR02000084.1 = NW_018114054.1 Primary Assembly 3371393 na Super-Scaffold_993 unplaced-scaffold na na JPSR02000085.1 = NW_018114056.1 Primary Assembly 3060204 na Super-Scaffold_1013 unplaced-scaffold na na JPSR02000086.1 = NW_018113946.1 Primary Assembly 2976529 na Super-Scaffold_1024 unplaced-scaffold na na JPSR02000087.1 = NW_018113947.1 Primary Assembly 2297478 na Super-Scaffold_1046 unplaced-scaffold na na JPSR02000088.1 = NW_018113948.1 Primary Assembly 586994 na Super-Scaffold_1077 unplaced-scaffold na na JPSR02000089.1 = NW_018113949.1 Primary Assembly 2328184 na Super-Scaffold_1088 unplaced-scaffold na na JPSR02000090.1 = NW_018113950.1 Primary Assembly 3542386 na Super-Scaffold_1110 unplaced-scaffold na na JPSR02000091.1 = NW_018113952.1 Primary Assembly 2128477 na Super-Scaffold_1131 unplaced-scaffold na na JPSR02000092.1 = NW_018113953.1 Primary Assembly 6138647 na Super-Scaffold_1153 unplaced-scaffold na na JPSR02000093.1 = NW_018113954.1 Primary Assembly 2170553 na Super-Scaffold_1174 unplaced-scaffold na na JPSR02000094.1 = NW_018113955.1 Primary Assembly 3711121 na Super-Scaffold_1197 unplaced-scaffold na na JPSR02000095.1 = NW_018113956.1 Primary Assembly 1692509 na Super-Scaffold_1208 unplaced-scaffold na na JPSR02000096.1 = NW_018113957.1 Primary Assembly 1678984 na Super-Scaffold_1218 unplaced-scaffold na na JPSR02000097.1 = NW_018113959.1 Primary Assembly 1558519 na Super-Scaffold_1228 unplaced-scaffold na na JPSR02000098.1 = NW_018113960.1 Primary Assembly 1655567 na Super-Scaffold_1249 unplaced-scaffold na na JPSR02000099.1 = NW_018113961.1 Primary Assembly 1635615 na Super-Scaffold_1289 unplaced-scaffold na na JPSR02000100.1 = NW_018113962.1 Primary Assembly 1397863 na Super-Scaffold_1299 unplaced-scaffold na na JPSR02000101.1 = NW_018113963.1 Primary Assembly 2104671 na Super-Scaffold_1409 unplaced-scaffold na na JPSR02000102.1 = NW_018113965.1 Primary Assembly 896253 na Super-Scaffold_1483 unplaced-scaffold na na JPSR02000103.1 = NW_018113966.1 Primary Assembly 660060 na Super-Scaffold_1515 unplaced-scaffold na na JPSR02000104.1 = NW_018113968.1 Primary Assembly 531306 na Super-Scaffold_1603 unplaced-scaffold na na JPSR02000105.1 = NW_018113970.1 Primary Assembly 183334 na Super-Scaffold_1660 unplaced-scaffold na na JPSR02000106.1 = NW_018113972.1 Primary Assembly 191756 na Super-Scaffold_1729 unplaced-scaffold na na JPSR02000107.1 = NW_018113973.1 Primary Assembly 38882285 na Super-Scaffold_1873 unplaced-scaffold na na JPSR02000108.1 = NW_018113975.1 Primary Assembly 671822 na Super-Scaffold_2006 unplaced-scaffold na na JPSR02000109.1 = NW_018113978.1 Primary Assembly 7103827 na Super-Scaffold_2344 unplaced-scaffold na na JPSR02000110.1 = NW_018113981.1 Primary Assembly 2152049 na Super-Scaffold_2494 unplaced-scaffold na na JPSR02000111.1 = NW_018113983.1 Primary Assembly 12052209 na Super-Scaffold_3620 unplaced-scaffold na na JPSR02000112.1 = NW_018113996.1 Primary Assembly 581642 na mitofull assembled-molecule MT Mitochondrion na <> NC_024698.1 non-nuclear 16946 na