# Assembly name: gtlEnvA5udCFS # Organism name: Methanosarcina sp. 2.H.T.1A.3 (euryarchaeotes) # Infraspecific name: strain=2.H.T.1A.3 # Taxid: 1483597 # BioSample: SAMN02708989 # BioProject: PRJNA242781 # Submitter: University of Illinois at Urbana-Champaign # Date: 2015-04-23 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: JJOX01 # Assembly method: IDBA-UD v. 1.1.0 # Genome coverage: 44.0x # Sequencing technology: Illumina HiSeq # GenBank assembly accession: GCA_000979425.1 # RefSeq assembly accession: GCF_000979425.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_000979435.1 GCF_000979435.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name scaffold20_1_size53100-refined unplaced-scaffold na na JJOX01000001.1 = NZ_JJOX01000001.1 Primary Assembly 53100 na scaffold54_1_size13800-refined unplaced-scaffold na na JJOX01000002.1 = NZ_JJOX01000002.1 Primary Assembly 13800 na scaffold78_1_size836-refined unplaced-scaffold na na JJOX01000003.1 = NZ_JJOX01000003.1 Primary Assembly 836 na scaffold85_1_size632-refined unplaced-scaffold na na JJOX01000004.1 = NZ_JJOX01000004.1 Primary Assembly 632 na scaffold58_1_size8727-refined unplaced-scaffold na na JJOX01000005.1 = NZ_JJOX01000005.1 Primary Assembly 8727 na scaffold73_1_size1113-refined unplaced-scaffold na na JJOX01000006.1 = NZ_JJOX01000006.1 Primary Assembly 1113 na scaffold79_1_size833-refined unplaced-scaffold na na JJOX01000007.1 = NZ_JJOX01000007.1 Primary Assembly 833 na scaffold92_1_size517-refined unplaced-scaffold na na JJOX01000008.1 = NZ_JJOX01000008.1 Primary Assembly 517 na scaffold40_1_size29079-refined unplaced-scaffold na na JJOX01000009.1 = NZ_JJOX01000009.1 Primary Assembly 28979 na scaffold63_1_size6940-refined unplaced-scaffold na na JJOX01000010.1 = NZ_JJOX01000010.1 Primary Assembly 6940 na scaffold8_1_size77318-refined unplaced-scaffold na na JJOX01000011.1 = NZ_JJOX01000011.1 Primary Assembly 77235 na scaffold27_1_size41883-refined unplaced-scaffold na na JJOX01000012.1 = NZ_JJOX01000012.1 Primary Assembly 41883 na scaffold71_1_size2593-refined unplaced-scaffold na na JJOX01000013.1 = NZ_JJOX01000013.1 Primary Assembly 2593 na scaffold24_1_size42954-refined unplaced-scaffold na na JJOX01000014.1 = NZ_JJOX01000014.1 Primary Assembly 42954 na scaffold83_1_size748-refined unplaced-scaffold na na JJOX01000015.1 = NZ_JJOX01000015.1 Primary Assembly 748 na scaffold18_1_size109874-refined unplaced-scaffold na na JJOX01000016.1 = NZ_JJOX01000016.1 Primary Assembly 109874 na scaffold67_1_size2423-refined unplaced-scaffold na na JJOX01000017.1 = NZ_JJOX01000017.1 Primary Assembly 2423 na scaffold57_1_size8760-refined unplaced-scaffold na na JJOX01000018.1 = NZ_JJOX01000018.1 Primary Assembly 8760 na scaffold51_1_size18226-refined unplaced-scaffold na na JJOX01000019.1 = NZ_JJOX01000019.1 Primary Assembly 18226 na scaffold26_1_size42157-refined unplaced-scaffold na na JJOX01000020.1 = NZ_JJOX01000020.1 Primary Assembly 42157 na scaffold31_1_size72636-refined unplaced-scaffold na na JJOX01000021.1 = NZ_JJOX01000021.1 Primary Assembly 70834 na scaffold1_1_size221823-refined unplaced-scaffold na na JJOX01000022.1 = NZ_JJOX01000022.1 Primary Assembly 221640 na scaffold86_1_size1040-refined unplaced-scaffold na na JJOX01000023.1 = NZ_JJOX01000023.1 Primary Assembly 1040 na scaffold80_1_size816-refined unplaced-scaffold na na JJOX01000024.1 = NZ_JJOX01000024.1 Primary Assembly 816 na scaffold53_1_size24341-refined unplaced-scaffold na na JJOX01000025.1 = NZ_JJOX01000025.1 Primary Assembly 24163 na scaffold47_1_size19969-refined unplaced-scaffold na na JJOX01000026.1 = NZ_JJOX01000026.1 Primary Assembly 19969 na scaffold3_1_size197640-refined unplaced-scaffold na na JJOX01000027.1 = NZ_JJOX01000027.1 Primary Assembly 197229 na scaffold32_1_size33345-refined unplaced-scaffold na na JJOX01000028.1 = NZ_JJOX01000028.1 Primary Assembly 33345 na scaffold91_1_size517-refined unplaced-scaffold na na JJOX01000029.1 = NZ_JJOX01000029.1 Primary Assembly 517 na scaffold50_1_size18526-refined unplaced-scaffold na na JJOX01000030.1 = NZ_JJOX01000030.1 Primary Assembly 18526 na scaffold6_1_size99771-refined unplaced-scaffold na na JJOX01000031.1 = NZ_JJOX01000031.1 Primary Assembly 99684 na scaffold42_1_size26229-refined unplaced-scaffold na na JJOX01000032.1 = NZ_JJOX01000032.1 Primary Assembly 26047 na scaffold64_1_size5845-refined unplaced-scaffold na na JJOX01000033.1 = NZ_JJOX01000033.1 Primary Assembly 5845 na scaffold41_1_size26270-refined unplaced-scaffold na na JJOX01000034.1 = NZ_JJOX01000034.1 Primary Assembly 26270 na scaffold82_1_size762-refined unplaced-scaffold na na JJOX01000035.1 = NZ_JJOX01000035.1 Primary Assembly 762 na scaffold7_1_size162551-refined unplaced-scaffold na na JJOX01000036.1 = NZ_JJOX01000036.1 Primary Assembly 161958 na scaffold75_1_size1308-refined unplaced-scaffold na na JJOX01000037.1 = NZ_JJOX01000037.1 Primary Assembly 1308 na scaffold16_1_size115152-refined unplaced-scaffold na na JJOX01000038.1 = NZ_JJOX01000038.1 Primary Assembly 115055 na scaffold11_1_size150579-refined unplaced-scaffold na na JJOX01000039.1 = NZ_JJOX01000039.1 Primary Assembly 149971 na scaffold56_1_size9704-refined unplaced-scaffold na na JJOX01000040.1 = NZ_JJOX01000040.1 Primary Assembly 9704 na scaffold48_1_size19961-refined unplaced-scaffold na na JJOX01000041.1 = NZ_JJOX01000041.1 Primary Assembly 19961 na scaffold25_1_size50522-refined unplaced-scaffold na na JJOX01000042.1 = NZ_JJOX01000042.1 Primary Assembly 50351 na scaffold23_1_size43713-refined unplaced-scaffold na na JJOX01000043.1 = NZ_JJOX01000043.1 Primary Assembly 43713 na scaffold34_1_size29811-refined unplaced-scaffold na na JJOX01000044.1 = NZ_JJOX01000044.1 Primary Assembly 29811 na scaffold69_1_size3236-refined unplaced-scaffold na na JJOX01000045.1 = NZ_JJOX01000045.1 Primary Assembly 3144 na scaffold22_1_size68739-refined unplaced-scaffold na na JJOX01000046.1 = NZ_JJOX01000046.1 Primary Assembly 68550 na scaffold45_1_size23293-refined unplaced-scaffold na na JJOX01000047.1 = NZ_JJOX01000047.1 Primary Assembly 23176 na scaffold2_1_size183372-refined unplaced-scaffold na na JJOX01000048.1 = NZ_JJOX01000048.1 Primary Assembly 183075 na scaffold65_1_size5705-refined unplaced-scaffold na na JJOX01000049.1 = NZ_JJOX01000049.1 Primary Assembly 5705 na scaffold28_1_size41222-refined unplaced-scaffold na na JJOX01000050.1 = NZ_JJOX01000050.1 Primary Assembly 41222 na scaffold19_1_size79430-refined unplaced-scaffold na na JJOX01000051.1 = NZ_JJOX01000051.1 Primary Assembly 76599 na scaffold72_1_size1151-refined unplaced-scaffold na na JJOX01000052.1 = NZ_JJOX01000052.1 Primary Assembly 1151 na scaffold36_1_size53700-refined unplaced-scaffold na na JJOX01000053.1 = NZ_JJOX01000053.1 Primary Assembly 53600 na scaffold60_1_size8317-refined unplaced-scaffold na na JJOX01000054.1 = NZ_JJOX01000054.1 Primary Assembly 8317 na scaffold70_1_size2135-refined unplaced-scaffold na na JJOX01000055.1 = NZ_JJOX01000055.1 Primary Assembly 2065 na scaffold29_1_size76167-refined unplaced-scaffold na na JJOX01000056.1 = NZ_JJOX01000056.1 Primary Assembly 76085 na scaffold30_1_size39510-refined unplaced-scaffold na na JJOX01000057.1 = NZ_JJOX01000057.1 Primary Assembly 39310 na scaffold77_1_size849-refined unplaced-scaffold na na JJOX01000058.1 = NZ_JJOX01000058.1 Primary Assembly 849 na scaffold81_1_size785-refined unplaced-scaffold na na JJOX01000059.1 = NZ_JJOX01000059.1 Primary Assembly 785 na scaffold12_1_size90657-refined unplaced-scaffold na na JJOX01000060.1 = NZ_JJOX01000060.1 Primary Assembly 90483 na scaffold52_1_size27122-refined unplaced-scaffold na na JJOX01000061.1 = NZ_JJOX01000061.1 Primary Assembly 27060 na scaffold89_1_size523-refined unplaced-scaffold na na JJOX01000062.1 = NZ_JJOX01000062.1 Primary Assembly 523 na scaffold37_1_size27061-refined unplaced-scaffold na na JJOX01000063.1 = NZ_JJOX01000063.1 Primary Assembly 27061 na scaffold66_1_size3467-refined unplaced-scaffold na na JJOX01000064.1 = NZ_JJOX01000064.1 Primary Assembly 3467 na scaffold10_1_size73705-refined unplaced-scaffold na na JJOX01000065.1 = NZ_JJOX01000065.1 Primary Assembly 73527 na scaffold68_1_size3639-refined unplaced-scaffold na na JJOX01000066.1 = NZ_JJOX01000066.1 Primary Assembly 3539 na scaffold33_1_size47417-refined unplaced-scaffold na na JJOX01000067.1 = NZ_JJOX01000067.1 Primary Assembly 47121 na scaffold21_1_size71868-refined unplaced-scaffold na na JJOX01000068.1 = NZ_JJOX01000068.1 Primary Assembly 71805 na scaffold84_1_size703-refined unplaced-scaffold na na JJOX01000069.1 = NZ_JJOX01000069.1 Primary Assembly 703 na scaffold76_1_size935-refined unplaced-scaffold na na JJOX01000070.1 = NZ_JJOX01000070.1 Primary Assembly 935 na scaffold17_1_size188935-refined unplaced-scaffold na na JJOX01000071.1 = NZ_JJOX01000071.1 Primary Assembly 188278 na scaffold44_1_size29145-refined unplaced-scaffold na na JJOX01000072.1 = NZ_JJOX01000072.1 Primary Assembly 29145 na scaffold15_1_size117346-refined unplaced-scaffold na na JJOX01000073.1 = NZ_JJOX01000073.1 Primary Assembly 117255 na scaffold87_1_size547-refined unplaced-scaffold na na JJOX01000074.1 = NZ_JJOX01000074.1 Primary Assembly 547 na scaffold13_1_size109777-refined unplaced-scaffold na na JJOX01000075.1 = NZ_JJOX01000075.1 Primary Assembly 109115 na scaffold59_1_size8318-refined unplaced-scaffold na na JJOX01000076.1 = NZ_JJOX01000076.1 Primary Assembly 8318 na scaffold4_1_size114314-refined unplaced-scaffold na na JJOX01000077.1 = NZ_JJOX01000077.1 Primary Assembly 114144 na scaffold55_1_size21966-refined unplaced-scaffold na na JJOX01000078.1 = NZ_JJOX01000078.1 Primary Assembly 21585 na scaffold5_1_size359742-refined unplaced-scaffold na na JJOX01000079.1 = NZ_JJOX01000079.1 Primary Assembly 358682 na scaffold49_1_size36578-refined unplaced-scaffold na na JJOX01000080.1 = NZ_JJOX01000080.1 Primary Assembly 36482 na scaffold90_1_size521-refined unplaced-scaffold na na JJOX01000081.1 = NZ_JJOX01000081.1 Primary Assembly 521 na scaffold88_1_size525-refined unplaced-scaffold na na JJOX01000082.1 = NZ_JJOX01000082.1 Primary Assembly 525 na scaffold43_1_size35942-refined unplaced-scaffold na na JJOX01000083.1 = NZ_JJOX01000083.1 Primary Assembly 35942 na scaffold9_1_size85723-refined unplaced-scaffold na na JJOX01000084.1 = NZ_JJOX01000084.1 Primary Assembly 85524 na scaffold39_1_size67828-refined unplaced-scaffold na na JJOX01000085.1 = NZ_JJOX01000085.1 Primary Assembly 67561 na scaffold46_1_size27366-refined unplaced-scaffold na na JJOX01000086.1 = NZ_JJOX01000086.1 Primary Assembly 27278 na scaffold74_1_size1773-refined unplaced-scaffold na na JJOX01000087.1 = NZ_JJOX01000087.1 Primary Assembly 1773 na scaffold38_1_size45324-refined unplaced-scaffold na na JJOX01000088.1 = NZ_JJOX01000088.1 Primary Assembly 45324 na scaffold14_1_size65137-refined unplaced-scaffold na na JJOX01000089.1 = NZ_JJOX01000089.1 Primary Assembly 65095 na scaffold62_1_size7528-refined unplaced-scaffold na na JJOX01000090.1 = NZ_JJOX01000090.1 Primary Assembly 7428 na scaffold35_1_size28555-refined unplaced-scaffold na na JJOX01000091.1 = NZ_JJOX01000091.1 Primary Assembly 28555 na scaffold61_1_size14084-refined unplaced-scaffold na na JJOX01000092.1 = NZ_JJOX01000092.1 Primary Assembly 13823 na