# Assembly name: S_ratti_ED321 # Organism name: Strongyloides ratti (nematodes) # Infraspecific name: strain=ED321 Heterogonic # Taxid: 34506 # BioSample: SAMEA1682816 # BioProject: PRJEB125 # Submitter: EBI # Date: 2014-09-18 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # Genome coverage: 55x # RefSeq category: Representative Genome # GenBank assembly accession: GCA_001040885.1 # RefSeq assembly accession: GCF_001040885.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_001040895.1 GCF_001040895.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name 1 assembled-molecule 1 Chromosome LN609528.1 = NC_037307.1 Primary Assembly 11693564 na 2 assembled-molecule 2 Chromosome LN609529.1 = NC_037308.1 Primary Assembly 16759152 na X assembled-molecule X Chromosome LN609530.1 = NC_037309.1 Primary Assembly 4663306 na srae_chrx_scaffold0000002 unlocalized-scaffold X Chromosome LN609396.1 = NW_020171510.1 Primary Assembly 3745422 na srae_chrx_scaffold0000003 unlocalized-scaffold X Chromosome LN609397.1 = NW_020171511.1 Primary Assembly 894123 na srae_chrx_scaffold0000004 unlocalized-scaffold X Chromosome LN609398.1 = NW_020171512.1 Primary Assembly 748239 na srae_chrx_scaffold0000005 unlocalized-scaffold X Chromosome LN609399.1 = NW_020171513.1 Primary Assembly 598741 na srae_chrx_scaffold0000006 unlocalized-scaffold X Chromosome LN609400.1 = NW_020171514.1 Primary Assembly 526229 na srae_chrx_scaffold0000007 unlocalized-scaffold X Chromosome LN609401.1 = NW_020171515.1 Primary Assembly 238473 na srae_chrx_scaffold0000008 unlocalized-scaffold X Chromosome LN609402.1 = NW_020171516.1 Primary Assembly 238446 na srae_chrx_scaffold0000009 unlocalized-scaffold X Chromosome LN609403.1 = NW_020171517.1 Primary Assembly 79446 na srae_chrx_scaffold0000010 unlocalized-scaffold X Chromosome LN609404.1 = NW_020171518.1 Primary Assembly 73681 na srae_scaffold0000001 unplaced-scaffold na na LN609405.1 = NW_020171519.1 Primary Assembly 859544 na srae_scaffold0000002 unplaced-scaffold na na LN609406.1 = NW_020171520.1 Primary Assembly 507912 na srae_scaffold0000003 unplaced-scaffold na na LN609407.1 = NW_020171521.1 Primary Assembly 455407 na srae_scaffold0000004 unplaced-scaffold na na LN609408.1 = NW_020171522.1 Primary Assembly 235861 na srae_scaffold0000005 unplaced-scaffold na na LN609409.1 = NW_020171523.1 Primary Assembly 90595 na srae_scaffold0000006 unplaced-scaffold na na LN609410.1 = NW_020171524.1 Primary Assembly 88845 na srae_scaffold0000007 unplaced-scaffold na na LN609411.1 = NW_020171525.1 Primary Assembly 40698 na srae_scaffold0000008 unplaced-scaffold na na LN609412.1 = NW_020171526.1 Primary Assembly 36351 na srae_scaffold0000009 unplaced-scaffold na na LN609413.1 = NW_020171527.1 Primary Assembly 32093 na srae_scaffold0000010 unplaced-scaffold na na LN609414.1 = NW_020171528.1 Primary Assembly 30824 na srae_scaffold0000011 unplaced-scaffold na na LN609415.1 = NW_020171529.1 Primary Assembly 29653 na srae_scaffold0000012 unplaced-scaffold na na LN609416.1 = NW_020171530.1 Primary Assembly 26045 na srae_scaffold0000013 unplaced-scaffold na na LN609417.1 = NW_020171531.1 Primary Assembly 18555 na srae_scaffold0000014 unplaced-scaffold na na LN609418.1 = NW_020171532.1 Primary Assembly 18250 na srae_scaffold0000015 unplaced-scaffold na na LN609419.1 = NW_020171533.1 Primary Assembly 17916 na srae_scaffold0000016 unplaced-scaffold na na LN609420.1 = NW_020171534.1 Primary Assembly 17698 na srae_scaffold0000017 unplaced-scaffold na na LN609421.1 = NW_020171535.1 Primary Assembly 15739 na srae_scaffold0000018 unplaced-scaffold na na LN609422.1 = NW_020171536.1 Primary Assembly 14015 na srae_scaffold0000019 unplaced-scaffold na na LN609423.1 = NW_020171537.1 Primary Assembly 12195 na srae_scaffold0000020 unplaced-scaffold na na LN609424.1 = NW_020171538.1 Primary Assembly 11709 na srae_scaffold0000021 unplaced-scaffold na na LN609425.1 = NW_020171539.1 Primary Assembly 11604 na srae_scaffold0000022 unplaced-scaffold na na LN609426.1 = NW_020171540.1 Primary Assembly 11407 na srae_scaffold0000023 unplaced-scaffold na na LN609427.1 = NW_020171541.1 Primary Assembly 10977 na srae_scaffold0000024 unplaced-scaffold na na LN609428.1 = NW_020171542.1 Primary Assembly 10942 na srae_scaffold0000025 unplaced-scaffold na na LN609429.1 = NW_020171543.1 Primary Assembly 10768 na srae_scaffold0000026 unplaced-scaffold na na LN609430.1 = NW_020171544.1 Primary Assembly 9787 na srae_scaffold0000027 unplaced-scaffold na na LN609431.1 = NW_020171545.1 Primary Assembly 9366 na srae_scaffold0000028 unplaced-scaffold na na LN609432.1 = NW_020171546.1 Primary Assembly 8296 na srae_scaffold0000029 unplaced-scaffold na na LN609433.1 = NW_020171547.1 Primary Assembly 8199 na srae_scaffold0000030 unplaced-scaffold na na LN609434.1 = NW_020171548.1 Primary Assembly 7033 na srae_scaffold0000031 unplaced-scaffold na na LN609435.1 = NW_020171549.1 Primary Assembly 7006 na srae_scaffold0000032 unplaced-scaffold na na LN609436.1 = NW_020171550.1 Primary Assembly 6991 na srae_scaffold0000033 unplaced-scaffold na na LN609437.1 = NW_020171551.1 Primary Assembly 6810 na srae_scaffold0000034 unplaced-scaffold na na LN609438.1 = NW_020171552.1 Primary Assembly 6352 na srae_scaffold0000035 unplaced-scaffold na na LN609439.1 = NW_020171553.1 Primary Assembly 6315 na srae_scaffold0000036 unplaced-scaffold na na LN609440.1 = NW_020171554.1 Primary Assembly 6209 na srae_scaffold0000037 unplaced-scaffold na na LN609441.1 = NW_020171555.1 Primary Assembly 6060 na srae_scaffold0000038 unplaced-scaffold na na LN609442.1 = NW_020171556.1 Primary Assembly 5877 na srae_scaffold0000039 unplaced-scaffold na na LN609443.1 = NW_020171557.1 Primary Assembly 5623 na srae_scaffold0000040 unplaced-scaffold na na LN609444.1 = NW_020171558.1 Primary Assembly 5029 na srae_scaffold0000041 unplaced-scaffold na na LN609445.1 = NW_020171559.1 Primary Assembly 4980 na srae_scaffold0000042 unplaced-scaffold na na LN609446.1 = NW_020171560.1 Primary Assembly 4857 na srae_scaffold0000043 unplaced-scaffold na na LN609447.1 = NW_020171561.1 Primary Assembly 4730 na srae_scaffold0000044 unplaced-scaffold na na LN609448.1 = NW_020171562.1 Primary Assembly 4607 na srae_scaffold0000045 unplaced-scaffold na na LN609449.1 = NW_020171563.1 Primary Assembly 4557 na srae_scaffold0000046 unplaced-scaffold na na LN609450.1 = NW_020171564.1 Primary Assembly 4413 na srae_scaffold0000047 unplaced-scaffold na na LN609451.1 = NW_020171565.1 Primary Assembly 4249 na srae_scaffold0000048 unplaced-scaffold na na LN609452.1 = NW_020171566.1 Primary Assembly 4217 na srae_scaffold0000049 unplaced-scaffold na na LN609453.1 = NW_020171567.1 Primary Assembly 3691 na srae_scaffold0000050 unplaced-scaffold na na LN609454.1 = NW_020171568.1 Primary Assembly 3676 na srae_scaffold0000051 unplaced-scaffold na na LN609455.1 = NW_020171569.1 Primary Assembly 3640 na srae_scaffold0000052 unplaced-scaffold na na LN609456.1 = NW_020171570.1 Primary Assembly 3632 na srae_scaffold0000053 unplaced-scaffold na na LN609457.1 = NW_020171571.1 Primary Assembly 3602 na srae_scaffold0000054 unplaced-scaffold na na LN609458.1 = NW_020171572.1 Primary Assembly 3513 na srae_scaffold0000055 unplaced-scaffold na na LN609459.1 = NW_020171573.1 Primary Assembly 3470 na srae_scaffold0000056 unplaced-scaffold na na LN609460.1 = NW_020171574.1 Primary Assembly 3409 na srae_scaffold0000057 unplaced-scaffold na na LN609461.1 = NW_020171575.1 Primary Assembly 3406 na srae_scaffold0000058 unplaced-scaffold na na LN609462.1 = NW_020171576.1 Primary Assembly 3341 na srae_scaffold0000059 unplaced-scaffold na na LN609463.1 = NW_020171577.1 Primary Assembly 3238 na srae_scaffold0000060 unplaced-scaffold na na LN609464.1 = NW_020171578.1 Primary Assembly 3204 na srae_scaffold0000061 unplaced-scaffold na na LN609465.1 = NW_020171579.1 Primary Assembly 3199 na srae_scaffold0000062 unplaced-scaffold na na LN609466.1 = NW_020171580.1 Primary Assembly 3182 na srae_scaffold0000063 unplaced-scaffold na na LN609467.1 = NW_020171581.1 Primary Assembly 3141 na srae_scaffold0000064 unplaced-scaffold na na LN609468.1 = NW_020171582.1 Primary Assembly 2698 na srae_scaffold0000065 unplaced-scaffold na na LN609469.1 = NW_020171583.1 Primary Assembly 2576 na srae_scaffold0000066 unplaced-scaffold na na LN609470.1 = NW_020171584.1 Primary Assembly 2567 na srae_scaffold0000067 unplaced-scaffold na na LN609471.1 = NW_020171585.1 Primary Assembly 2482 na srae_scaffold0000068 unplaced-scaffold na na LN609472.1 = NW_020171586.1 Primary Assembly 2433 na srae_scaffold0000069 unplaced-scaffold na na LN609473.1 = NW_020171587.1 Primary Assembly 2419 na srae_scaffold0000070 unplaced-scaffold na na LN609474.1 = NW_020171588.1 Primary Assembly 2394 na srae_scaffold0000071 unplaced-scaffold na na LN609475.1 = NW_020171589.1 Primary Assembly 2302 na srae_scaffold0000072 unplaced-scaffold na na LN609476.1 = NW_020171590.1 Primary Assembly 2199 na srae_scaffold0000073 unplaced-scaffold na na LN609477.1 = NW_020171591.1 Primary Assembly 2174 na srae_scaffold0000074 unplaced-scaffold na na LN609478.1 = NW_020171592.1 Primary Assembly 2073 na srae_scaffold0000075 unplaced-scaffold na na LN609479.1 = NW_020171593.1 Primary Assembly 2071 na srae_scaffold0000076 unplaced-scaffold na na LN609480.1 = NW_020171594.1 Primary Assembly 2063 na srae_scaffold0000077 unplaced-scaffold na na LN609481.1 = NW_020171595.1 Primary Assembly 2061 na srae_scaffold0000078 unplaced-scaffold na na LN609482.1 = NW_020171596.1 Primary Assembly 2031 na srae_scaffold0000079 unplaced-scaffold na na LN609483.1 = NW_020171597.1 Primary Assembly 1960 na srae_scaffold0000080 unplaced-scaffold na na LN609484.1 = NW_020171598.1 Primary Assembly 1956 na srae_scaffold0000081 unplaced-scaffold na na LN609485.1 = NW_020171599.1 Primary Assembly 1854 na srae_scaffold0000082 unplaced-scaffold na na LN609486.1 = NW_020171600.1 Primary Assembly 1846 na srae_scaffold0000083 unplaced-scaffold na na LN609487.1 = NW_020171601.1 Primary Assembly 1843 na srae_scaffold0000084 unplaced-scaffold na na LN609488.1 = NW_020171602.1 Primary Assembly 1821 na srae_scaffold0000085 unplaced-scaffold na na LN609489.1 = NW_020171603.1 Primary Assembly 1793 na srae_scaffold0000086 unplaced-scaffold na na LN609490.1 = NW_020171604.1 Primary Assembly 1721 na srae_scaffold0000087 unplaced-scaffold na na LN609491.1 = NW_020171605.1 Primary Assembly 1707 na srae_scaffold0000088 unplaced-scaffold na na LN609492.1 = NW_020171606.1 Primary Assembly 1697 na srae_scaffold0000089 unplaced-scaffold na na LN609493.1 = NW_020171607.1 Primary Assembly 1684 na srae_scaffold0000090 unplaced-scaffold na na LN609494.1 = NW_020171608.1 Primary Assembly 1671 na srae_scaffold0000091 unplaced-scaffold na na LN609495.1 = NW_020171609.1 Primary Assembly 1570 na srae_scaffold0000092 unplaced-scaffold na na LN609496.1 = NW_020171610.1 Primary Assembly 1382 na srae_scaffold0000093 unplaced-scaffold na na LN609497.1 = NW_020171611.1 Primary Assembly 1364 na srae_scaffold0000094 unplaced-scaffold na na LN609498.1 = NW_020171612.1 Primary Assembly 1313 na srae_scaffold0000095 unplaced-scaffold na na LN609499.1 = NW_020171613.1 Primary Assembly 1282 na srae_scaffold0000096 unplaced-scaffold na na LN609500.1 = NW_020171614.1 Primary Assembly 1191 na srae_scaffold0000097 unplaced-scaffold na na LN609501.1 = NW_020171615.1 Primary Assembly 1179 na srae_scaffold0000098 unplaced-scaffold na na LN609502.1 = NW_020171616.1 Primary Assembly 1176 na srae_scaffold0000099 unplaced-scaffold na na LN609503.1 = NW_020171617.1 Primary Assembly 1153 na srae_scaffold0000100 unplaced-scaffold na na LN609504.1 = NW_020171618.1 Primary Assembly 1133 na srae_scaffold0000101 unplaced-scaffold na na LN609505.1 = NW_020171619.1 Primary Assembly 1085 na srae_scaffold0000102 unplaced-scaffold na na LN609506.1 = NW_020171620.1 Primary Assembly 1083 na srae_scaffold0000103 unplaced-scaffold na na LN609507.1 = NW_020171621.1 Primary Assembly 1056 na srae_scaffold0000104 unplaced-scaffold na na LN609508.1 = NW_020171622.1 Primary Assembly 956 na srae_scaffold0000105 unplaced-scaffold na na LN609509.1 = NW_020171623.1 Primary Assembly 893 na srae_scaffold0000106 unplaced-scaffold na na LN609510.1 = NW_020171624.1 Primary Assembly 798 na srae_scaffold0000107 unplaced-scaffold na na LN609511.1 = NW_020171625.1 Primary Assembly 778 na srae_scaffold0000108 unplaced-scaffold na na LN609512.1 = NW_020171626.1 Primary Assembly 775 na srae_scaffold0000109 unplaced-scaffold na na LN609513.1 = NW_020171627.1 Primary Assembly 743 na srae_scaffold0000110 unplaced-scaffold na na LN609514.1 = NW_020171628.1 Primary Assembly 738 na srae_scaffold0000111 unplaced-scaffold na na LN609515.1 = NW_020171629.1 Primary Assembly 692 na srae_scaffold0000112 unplaced-scaffold na na LN609516.1 = NW_020171630.1 Primary Assembly 510 na srae_scaffold0000113 unplaced-scaffold na na LN609517.1 = NW_020171631.1 Primary Assembly 500 na srae_scaffold0000114 unplaced-scaffold na na LN609518.1 = NW_020171632.1 Primary Assembly 469 na srae_scaffold0000115 unplaced-scaffold na na LN609519.1 = NW_020171633.1 Primary Assembly 421 na srae_scaffold0000116 unplaced-scaffold na na LN609520.1 = NW_020171634.1 Primary Assembly 404 na srae_scaffold0000117 unplaced-scaffold na na LN609521.1 = NW_020171635.1 Primary Assembly 404 na srae_scaffold0000118 unplaced-scaffold na na LN609522.1 = NW_020171636.1 Primary Assembly 381 na srae_scaffold0000119 unplaced-scaffold na na LN609523.1 = NW_020171637.1 Primary Assembly 331 na srae_scaffold0000120 unplaced-scaffold na na LN609524.1 = NW_020171638.1 Primary Assembly 304 na srae_scaffold0000121 unplaced-scaffold na na LN609525.1 = NW_020171639.1 Primary Assembly 293 na srae_scaffold0000122 unplaced-scaffold na na LN609526.1 = NW_020171640.1 Primary Assembly 276 na srae_scaffold0000123 unplaced-scaffold na na LN609527.1 = NW_020171641.1 Primary Assembly 181 na