# Assembly name: ASM143433v1 # Organism name: Lactobacillus kalixensis DSM 16043 (firmicutes) # Infraspecific name: strain=DSM 16043 # Taxid: 1423763 # BioSample: SAMN02369405 # BioProject: PRJNA222257 # Submitter: Shanghai Majorbio # Date: 2015-11-06 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: AZFM01 # Assembly method: SOAPdenovo v. 2 # Expected final version: yes # Genome coverage: 100x # Sequencing technology: Illumina MiSeq; Illumina HiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_001434335.1 # RefSeq assembly accession: GCF_001434335.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_001434345.1 GCF_001434345.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Scaffold1 unplaced-scaffold na na AZFM01000001.1 = NZ_AZFM01000001.1 Primary Assembly 155348 na Scaffold2 unplaced-scaffold na na AZFM01000002.1 = NZ_AZFM01000002.1 Primary Assembly 110602 na Scaffold3 unplaced-scaffold na na AZFM01000003.1 = NZ_AZFM01000003.1 Primary Assembly 110529 na Scaffold4 unplaced-scaffold na na AZFM01000004.1 = NZ_AZFM01000004.1 Primary Assembly 107455 na Scaffold5 unplaced-scaffold na na AZFM01000005.1 = NZ_AZFM01000005.1 Primary Assembly 95329 na Scaffold6 unplaced-scaffold na na AZFM01000006.1 = NZ_AZFM01000006.1 Primary Assembly 73704 na Scaffold7 unplaced-scaffold na na AZFM01000007.1 = NZ_AZFM01000007.1 Primary Assembly 71233 na Scaffold8 unplaced-scaffold na na AZFM01000008.1 = NZ_AZFM01000008.1 Primary Assembly 68325 na Scaffold9 unplaced-scaffold na na AZFM01000009.1 = NZ_AZFM01000009.1 Primary Assembly 67961 na Scaffold10 unplaced-scaffold na na AZFM01000010.1 = NZ_AZFM01000010.1 Primary Assembly 65132 na Scaffold11 unplaced-scaffold na na AZFM01000011.1 = NZ_AZFM01000011.1 Primary Assembly 65066 na Scaffold12 unplaced-scaffold na na AZFM01000012.1 = NZ_AZFM01000012.1 Primary Assembly 63592 na Scaffold13 unplaced-scaffold na na AZFM01000013.1 = NZ_AZFM01000013.1 Primary Assembly 56500 na Scaffold14 unplaced-scaffold na na AZFM01000014.1 = NZ_AZFM01000014.1 Primary Assembly 49978 na Scaffold15 unplaced-scaffold na na AZFM01000015.1 = NZ_AZFM01000015.1 Primary Assembly 47894 na Scaffold16 unplaced-scaffold na na AZFM01000016.1 = NZ_AZFM01000016.1 Primary Assembly 43508 na Scaffold17 unplaced-scaffold na na AZFM01000017.1 = NZ_AZFM01000017.1 Primary Assembly 39760 na Scaffold18 unplaced-scaffold na na AZFM01000018.1 = NZ_AZFM01000018.1 Primary Assembly 39257 na Scaffold19 unplaced-scaffold na na AZFM01000019.1 = NZ_AZFM01000019.1 Primary Assembly 36636 na Scaffold20 unplaced-scaffold na na AZFM01000020.1 = NZ_AZFM01000020.1 Primary Assembly 34660 na Scaffold21 unplaced-scaffold na na AZFM01000021.1 = NZ_AZFM01000021.1 Primary Assembly 32628 na Scaffold22 unplaced-scaffold na na AZFM01000022.1 = NZ_AZFM01000022.1 Primary Assembly 32409 na Scaffold23 unplaced-scaffold na na AZFM01000023.1 = NZ_AZFM01000023.1 Primary Assembly 30494 na Scaffold24 unplaced-scaffold na na AZFM01000024.1 = NZ_AZFM01000024.1 Primary Assembly 29676 na Scaffold25 unplaced-scaffold na na AZFM01000025.1 = NZ_AZFM01000025.1 Primary Assembly 28368 na Scaffold26 unplaced-scaffold na na AZFM01000026.1 = NZ_AZFM01000026.1 Primary Assembly 26719 na Scaffold27 unplaced-scaffold na na AZFM01000027.1 = NZ_AZFM01000027.1 Primary Assembly 26044 na Scaffold28 unplaced-scaffold na na AZFM01000028.1 = NZ_AZFM01000028.1 Primary Assembly 25679 na Scaffold29 unplaced-scaffold na na AZFM01000029.1 = NZ_AZFM01000029.1 Primary Assembly 24645 na Scaffold30 unplaced-scaffold na na AZFM01000030.1 = NZ_AZFM01000030.1 Primary Assembly 24601 na Scaffold31 unplaced-scaffold na na AZFM01000031.1 = NZ_AZFM01000031.1 Primary Assembly 22195 na Scaffold32 unplaced-scaffold na na AZFM01000032.1 = NZ_AZFM01000032.1 Primary Assembly 22173 na Scaffold33 unplaced-scaffold na na AZFM01000033.1 = NZ_AZFM01000033.1 Primary Assembly 20133 na Scaffold34 unplaced-scaffold na na AZFM01000034.1 = NZ_AZFM01000034.1 Primary Assembly 20098 na Scaffold35 unplaced-scaffold na na AZFM01000035.1 = NZ_AZFM01000035.1 Primary Assembly 16645 na Scaffold36 unplaced-scaffold na na AZFM01000036.1 = NZ_AZFM01000036.1 Primary Assembly 16132 na Scaffold37 unplaced-scaffold na na AZFM01000037.1 = NZ_AZFM01000037.1 Primary Assembly 14600 na Scaffold38 unplaced-scaffold na na AZFM01000038.1 = NZ_AZFM01000038.1 Primary Assembly 14511 na Scaffold39 unplaced-scaffold na na AZFM01000039.1 = NZ_AZFM01000039.1 Primary Assembly 13758 na Scaffold40 unplaced-scaffold na na AZFM01000040.1 = NZ_AZFM01000040.1 Primary Assembly 13543 na Scaffold41 unplaced-scaffold na na AZFM01000041.1 = NZ_AZFM01000041.1 Primary Assembly 12856 na Scaffold42 unplaced-scaffold na na AZFM01000042.1 = NZ_AZFM01000042.1 Primary Assembly 12344 na Scaffold43 unplaced-scaffold na na AZFM01000043.1 = NZ_AZFM01000043.1 Primary Assembly 12338 na Scaffold44 unplaced-scaffold na na AZFM01000044.1 = NZ_AZFM01000044.1 Primary Assembly 11214 na Scaffold45 unplaced-scaffold na na AZFM01000045.1 = NZ_AZFM01000045.1 Primary Assembly 10608 na Scaffold46 unplaced-scaffold na na AZFM01000046.1 = NZ_AZFM01000046.1 Primary Assembly 10308 na Scaffold47 unplaced-scaffold na na AZFM01000047.1 = NZ_AZFM01000047.1 Primary Assembly 10154 na Scaffold48 unplaced-scaffold na na AZFM01000048.1 = NZ_AZFM01000048.1 Primary Assembly 8888 na Scaffold49 unplaced-scaffold na na AZFM01000049.1 = NZ_AZFM01000049.1 Primary Assembly 8878 na Scaffold50 unplaced-scaffold na na AZFM01000050.1 = NZ_AZFM01000050.1 Primary Assembly 7516 na Scaffold51 unplaced-scaffold na na AZFM01000051.1 = NZ_AZFM01000051.1 Primary Assembly 7482 na Scaffold52 unplaced-scaffold na na AZFM01000052.1 = NZ_AZFM01000052.1 Primary Assembly 6907 na Scaffold53 unplaced-scaffold na na AZFM01000053.1 = NZ_AZFM01000053.1 Primary Assembly 6166 na Scaffold54 unplaced-scaffold na na AZFM01000054.1 = NZ_AZFM01000054.1 Primary Assembly 5468 na Scaffold55 unplaced-scaffold na na AZFM01000055.1 = NZ_AZFM01000055.1 Primary Assembly 4968 na Scaffold56 unplaced-scaffold na na AZFM01000056.1 = NZ_AZFM01000056.1 Primary Assembly 4849 na Scaffold57 unplaced-scaffold na na AZFM01000057.1 = NZ_AZFM01000057.1 Primary Assembly 4671 na Scaffold58 unplaced-scaffold na na AZFM01000058.1 = NZ_AZFM01000058.1 Primary Assembly 4566 na Scaffold59 unplaced-scaffold na na AZFM01000059.1 = NZ_AZFM01000059.1 Primary Assembly 4468 na Scaffold60 unplaced-scaffold na na AZFM01000060.1 = NZ_AZFM01000060.1 Primary Assembly 3877 na Scaffold61 unplaced-scaffold na na AZFM01000061.1 = NZ_AZFM01000061.1 Primary Assembly 3590 na Scaffold62 unplaced-scaffold na na AZFM01000062.1 = NZ_AZFM01000062.1 Primary Assembly 3521 na Scaffold63 unplaced-scaffold na na AZFM01000063.1 = NZ_AZFM01000063.1 Primary Assembly 3451 na Scaffold64 unplaced-scaffold na na AZFM01000064.1 = NZ_AZFM01000064.1 Primary Assembly 3410 na Scaffold65 unplaced-scaffold na na AZFM01000065.1 = NZ_AZFM01000065.1 Primary Assembly 3086 na Scaffold66 unplaced-scaffold na na AZFM01000066.1 = NZ_AZFM01000066.1 Primary Assembly 2904 na Scaffold67 unplaced-scaffold na na AZFM01000067.1 = NZ_AZFM01000067.1 Primary Assembly 2704 na Scaffold68 unplaced-scaffold na na AZFM01000068.1 = NZ_AZFM01000068.1 Primary Assembly 2616 na Scaffold69 unplaced-scaffold na na AZFM01000069.1 = NZ_AZFM01000069.1 Primary Assembly 2336 na Scaffold70 unplaced-scaffold na na AZFM01000070.1 = NZ_AZFM01000070.1 Primary Assembly 2221 na Scaffold71 unplaced-scaffold na na AZFM01000071.1 = NZ_AZFM01000071.1 Primary Assembly 2147 na Scaffold72 unplaced-scaffold na na AZFM01000072.1 = NZ_AZFM01000072.1 Primary Assembly 2125 na Scaffold73 unplaced-scaffold na na AZFM01000073.1 = NZ_AZFM01000073.1 Primary Assembly 1969 na Scaffold74 unplaced-scaffold na na AZFM01000074.1 = NZ_AZFM01000074.1 Primary Assembly 1856 na Scaffold75 unplaced-scaffold na na AZFM01000075.1 = NZ_AZFM01000075.1 Primary Assembly 1686 na Scaffold76 unplaced-scaffold na na AZFM01000076.1 = NZ_AZFM01000076.1 Primary Assembly 1604 na Scaffold77 unplaced-scaffold na na AZFM01000077.1 = NZ_AZFM01000077.1 Primary Assembly 1558 na Scaffold78 unplaced-scaffold na na AZFM01000078.1 = NZ_AZFM01000078.1 Primary Assembly 1554 na Scaffold79 unplaced-scaffold na na AZFM01000079.1 = NZ_AZFM01000079.1 Primary Assembly 1493 na Scaffold80 unplaced-scaffold na na AZFM01000080.1 = NZ_AZFM01000080.1 Primary Assembly 1435 na Scaffold81 unplaced-scaffold na na AZFM01000081.1 = NZ_AZFM01000081.1 Primary Assembly 1124 na Scaffold82 unplaced-scaffold na na AZFM01000082.1 = NZ_AZFM01000082.1 Primary Assembly 1052 na Scaffold83 unplaced-scaffold na na AZFM01000083.1 = NZ_AZFM01000083.1 Primary Assembly 1025 na Scaffold84 unplaced-scaffold na na AZFM01000084.1 = NZ_AZFM01000084.1 Primary Assembly 1008 na Scaffold85 unplaced-scaffold na na AZFM01000085.1 = NZ_AZFM01000085.1 Primary Assembly 981 na Scaffold86 unplaced-scaffold na na AZFM01000086.1 = NZ_AZFM01000086.1 Primary Assembly 859 na Scaffold87 unplaced-scaffold na na AZFM01000087.1 = NZ_AZFM01000087.1 Primary Assembly 855 na Scaffold88 unplaced-scaffold na na AZFM01000088.1 = NZ_AZFM01000088.1 Primary Assembly 761 na Scaffold89 unplaced-scaffold na na AZFM01000089.1 = NZ_AZFM01000089.1 Primary Assembly 731 na Scaffold90 unplaced-scaffold na na AZFM01000090.1 = NZ_AZFM01000090.1 Primary Assembly 574 na Scaffold91 unplaced-scaffold na na AZFM01000091.1 = NZ_AZFM01000091.1 Primary Assembly 554 na Scaffold92 unplaced-scaffold na na AZFM01000092.1 = NZ_AZFM01000092.1 Primary Assembly 475 na Scaffold93 unplaced-scaffold na na AZFM01000093.1 = NZ_AZFM01000093.1 Primary Assembly 428 na Scaffold94 unplaced-scaffold na na AZFM01000094.1 = NZ_AZFM01000094.1 Primary Assembly 395 na Scaffold95 unplaced-scaffold na na AZFM01000095.1 = NZ_AZFM01000095.1 Primary Assembly 363 na Scaffold96 unplaced-scaffold na na AZFM01000096.1 = NZ_AZFM01000096.1 Primary Assembly 361 na Scaffold97 unplaced-scaffold na na AZFM01000097.1 = NZ_AZFM01000097.1 Primary Assembly 357 na Scaffold98 unplaced-scaffold na na AZFM01000098.1 = NZ_AZFM01000098.1 Primary Assembly 335 na Scaffold99 unplaced-scaffold na na AZFM01000099.1 = NZ_AZFM01000099.1 Primary Assembly 315 na Scaffold100 unplaced-scaffold na na AZFM01000100.1 = NZ_AZFM01000100.1 Primary Assembly 311 na Scaffold101 unplaced-scaffold na na AZFM01000101.1 = NZ_AZFM01000101.1 Primary Assembly 284 na Scaffold102 unplaced-scaffold na na AZFM01000102.1 = NZ_AZFM01000102.1 Primary Assembly 282 na Scaffold103 unplaced-scaffold na na AZFM01000103.1 = NZ_AZFM01000103.1 Primary Assembly 267 na Scaffold104 unplaced-scaffold na na AZFM01000104.1 = NZ_AZFM01000104.1 Primary Assembly 266 na Scaffold105 unplaced-scaffold na na AZFM01000105.1 = NZ_AZFM01000105.1 Primary Assembly 240 na Scaffold106 unplaced-scaffold na na AZFM01000106.1 = NZ_AZFM01000106.1 Primary Assembly 236 na Scaffold107 unplaced-scaffold na na AZFM01000107.1 = NZ_AZFM01000107.1 Primary Assembly 226 na Scaffold108 unplaced-scaffold na na AZFM01000108.1 = NZ_AZFM01000108.1 Primary Assembly 213 na