# Assembly name: ASM143436v1 # Organism name: Limosilactobacillus gastricus DSM 16045 (firmicutes) # Infraspecific name: strain=DSM 16045 # Taxid: 1423749 # BioSample: SAMN02369419 # BioProject: PRJNA222257 # Submitter: Shanghai Majorbio # Date: 2015-11-06 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: AZFN01 # Assembly method: SOAPdenovo v. 2 # Expected final version: yes # Genome coverage: 100x # Sequencing technology: Illumina MiSeq; Illumina HiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_001434365.1 # RefSeq assembly accession: GCF_001434365.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_001434385.1 GCF_001434385.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Scaffold1 unplaced-scaffold na na AZFN01000001.1 = NZ_AZFN01000001.1 Primary Assembly 126654 na Scaffold2 unplaced-scaffold na na AZFN01000002.1 = NZ_AZFN01000002.1 Primary Assembly 109102 na Scaffold3 unplaced-scaffold na na AZFN01000003.1 = NZ_AZFN01000003.1 Primary Assembly 98888 na Scaffold4 unplaced-scaffold na na AZFN01000004.1 = NZ_AZFN01000004.1 Primary Assembly 95046 na Scaffold5 unplaced-scaffold na na AZFN01000005.1 = NZ_AZFN01000005.1 Primary Assembly 92030 na Scaffold6 unplaced-scaffold na na AZFN01000006.1 = NZ_AZFN01000006.1 Primary Assembly 90113 na Scaffold7 unplaced-scaffold na na AZFN01000007.1 = NZ_AZFN01000007.1 Primary Assembly 84746 na Scaffold8 unplaced-scaffold na na AZFN01000008.1 = NZ_AZFN01000008.1 Primary Assembly 84422 na Scaffold9 unplaced-scaffold na na AZFN01000009.1 = NZ_AZFN01000009.1 Primary Assembly 83725 na Scaffold10 unplaced-scaffold na na AZFN01000010.1 = NZ_AZFN01000010.1 Primary Assembly 82805 na Scaffold11 unplaced-scaffold na na AZFN01000011.1 = NZ_AZFN01000011.1 Primary Assembly 73808 na Scaffold12 unplaced-scaffold na na AZFN01000012.1 = NZ_AZFN01000012.1 Primary Assembly 73372 na Scaffold13 unplaced-scaffold na na AZFN01000013.1 = NZ_AZFN01000013.1 Primary Assembly 59622 na Scaffold14 unplaced-scaffold na na AZFN01000014.1 = NZ_AZFN01000014.1 Primary Assembly 59612 na Scaffold15 unplaced-scaffold na na AZFN01000015.1 = NZ_AZFN01000015.1 Primary Assembly 48782 na Scaffold16 unplaced-scaffold na na AZFN01000016.1 = NZ_AZFN01000016.1 Primary Assembly 48132 na Scaffold17 unplaced-scaffold na na AZFN01000017.1 = NZ_AZFN01000017.1 Primary Assembly 47582 na Scaffold18 unplaced-scaffold na na AZFN01000018.1 = NZ_AZFN01000018.1 Primary Assembly 45672 na Scaffold19 unplaced-scaffold na na AZFN01000019.1 = NZ_AZFN01000019.1 Primary Assembly 42393 na Scaffold20 unplaced-scaffold na na AZFN01000020.1 = NZ_AZFN01000020.1 Primary Assembly 41751 na Scaffold21 unplaced-scaffold na na AZFN01000021.1 = NZ_AZFN01000021.1 Primary Assembly 39249 na Scaffold22 unplaced-scaffold na na AZFN01000022.1 = NZ_AZFN01000022.1 Primary Assembly 30582 na Scaffold23 unplaced-scaffold na na AZFN01000023.1 = NZ_AZFN01000023.1 Primary Assembly 28612 na Scaffold24 unplaced-scaffold na na AZFN01000024.1 = NZ_AZFN01000024.1 Primary Assembly 25490 na Scaffold25 unplaced-scaffold na na AZFN01000025.1 = NZ_AZFN01000025.1 Primary Assembly 22766 na Scaffold26 unplaced-scaffold na na AZFN01000026.1 = NZ_AZFN01000026.1 Primary Assembly 22080 na Scaffold27 unplaced-scaffold na na AZFN01000027.1 = NZ_AZFN01000027.1 Primary Assembly 19723 na Scaffold28 unplaced-scaffold na na AZFN01000028.1 = NZ_AZFN01000028.1 Primary Assembly 18667 na Scaffold29 unplaced-scaffold na na AZFN01000029.1 = NZ_AZFN01000029.1 Primary Assembly 18352 na Scaffold30 unplaced-scaffold na na AZFN01000030.1 = NZ_AZFN01000030.1 Primary Assembly 16137 na Scaffold31 unplaced-scaffold na na AZFN01000031.1 = NZ_AZFN01000031.1 Primary Assembly 14621 na Scaffold32 unplaced-scaffold na na AZFN01000032.1 = NZ_AZFN01000032.1 Primary Assembly 12186 na Scaffold33 unplaced-scaffold na na AZFN01000033.1 = NZ_AZFN01000033.1 Primary Assembly 11976 na Scaffold34 unplaced-scaffold na na AZFN01000034.1 = NZ_AZFN01000034.1 Primary Assembly 11892 na Scaffold35 unplaced-scaffold na na AZFN01000035.1 = NZ_AZFN01000035.1 Primary Assembly 11869 na Scaffold36 unplaced-scaffold na na AZFN01000036.1 = NZ_AZFN01000036.1 Primary Assembly 6654 na Scaffold37 unplaced-scaffold na na AZFN01000037.1 = NZ_AZFN01000037.1 Primary Assembly 6460 na Scaffold38 unplaced-scaffold na na AZFN01000038.1 = NZ_AZFN01000038.1 Primary Assembly 5032 na Scaffold39 unplaced-scaffold na na AZFN01000039.1 = NZ_AZFN01000039.1 Primary Assembly 4389 na Scaffold40 unplaced-scaffold na na AZFN01000040.1 = NZ_AZFN01000040.1 Primary Assembly 4334 na Scaffold41 unplaced-scaffold na na AZFN01000041.1 = NZ_AZFN01000041.1 Primary Assembly 2921 na Scaffold42 unplaced-scaffold na na AZFN01000042.1 = NZ_AZFN01000042.1 Primary Assembly 2865 na Scaffold43 unplaced-scaffold na na AZFN01000043.1 = NZ_AZFN01000043.1 Primary Assembly 2815 na Scaffold44 unplaced-scaffold na na AZFN01000044.1 = NZ_AZFN01000044.1 Primary Assembly 2362 na Scaffold45 unplaced-scaffold na na AZFN01000045.1 = NZ_AZFN01000045.1 Primary Assembly 2103 na Scaffold46 unplaced-scaffold na na AZFN01000046.1 = NZ_AZFN01000046.1 Primary Assembly 1985 na Scaffold47 unplaced-scaffold na na AZFN01000047.1 = NZ_AZFN01000047.1 Primary Assembly 1904 na Scaffold48 unplaced-scaffold na na AZFN01000048.1 = NZ_AZFN01000048.1 Primary Assembly 1773 na Scaffold49 unplaced-scaffold na na AZFN01000049.1 = NZ_AZFN01000049.1 Primary Assembly 1520 na Scaffold50 unplaced-scaffold na na AZFN01000050.1 = NZ_AZFN01000050.1 Primary Assembly 1028 na Scaffold51 unplaced-scaffold na na AZFN01000051.1 = NZ_AZFN01000051.1 Primary Assembly 931 na Scaffold52 unplaced-scaffold na na AZFN01000052.1 = NZ_AZFN01000052.1 Primary Assembly 930 na Scaffold53 unplaced-scaffold na na AZFN01000053.1 = NZ_AZFN01000053.1 Primary Assembly 849 na Scaffold54 unplaced-scaffold na na AZFN01000054.1 = NZ_AZFN01000054.1 Primary Assembly 580 na Scaffold55 unplaced-scaffold na na AZFN01000055.1 = NZ_AZFN01000055.1 Primary Assembly 568 na Scaffold56 unplaced-scaffold na na AZFN01000056.1 = NZ_AZFN01000056.1 Primary Assembly 519 na Scaffold57 unplaced-scaffold na na AZFN01000057.1 = NZ_AZFN01000057.1 Primary Assembly 452 na Scaffold58 unplaced-scaffold na na AZFN01000058.1 = NZ_AZFN01000058.1 Primary Assembly 398 na Scaffold59 unplaced-scaffold na na AZFN01000059.1 = NZ_AZFN01000059.1 Primary Assembly 348 na Scaffold60 unplaced-scaffold na na AZFN01000060.1 = NZ_AZFN01000060.1 Primary Assembly 348 na Scaffold61 unplaced-scaffold na na AZFN01000061.1 = NZ_AZFN01000061.1 Primary Assembly 347 na Scaffold62 unplaced-scaffold na na AZFN01000062.1 = NZ_AZFN01000062.1 Primary Assembly 344 na Scaffold63 unplaced-scaffold na na AZFN01000063.1 = NZ_AZFN01000063.1 Primary Assembly 329 na Scaffold64 unplaced-scaffold na na AZFN01000064.1 = NZ_AZFN01000064.1 Primary Assembly 313 na Scaffold65 unplaced-scaffold na na AZFN01000065.1 = NZ_AZFN01000065.1 Primary Assembly 308 na Scaffold66 unplaced-scaffold na na AZFN01000066.1 = NZ_AZFN01000066.1 Primary Assembly 293 na