# Assembly name: ASM143451v1 # Organism name: Lactobacillus hamsteri DSM 5661 = JCM 6256 (firmicutes) # Infraspecific name: strain=DSM 5661 # Taxid: 1423754 # BioSample: SAMN02369398 # BioProject: PRJNA222257 # Submitter: Shanghai Majorbio # Date: 2015-11-06 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: AZGI01 # Assembly method: SOAPdenovo v. 2 # Expected final version: yes # Genome coverage: 100x # Sequencing technology: Illumina MiSeq; Illumina HiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_001434515.1 # RefSeq assembly accession: GCF_001434515.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_001434525.1 GCF_001434525.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name NODE_5 unplaced-scaffold na na AZGI01000001.1 = NZ_AZGI01000001.1 Primary Assembly 79894 na NODE_6 unplaced-scaffold na na AZGI01000002.1 = NZ_AZGI01000002.1 Primary Assembly 45824 na NODE_7 unplaced-scaffold na na AZGI01000003.1 = NZ_AZGI01000003.1 Primary Assembly 91196 na NODE_8 unplaced-scaffold na na AZGI01000004.1 = NZ_AZGI01000004.1 Primary Assembly 2255 na NODE_9 unplaced-scaffold na na AZGI01000005.1 = NZ_AZGI01000005.1 Primary Assembly 166377 na NODE_10 unplaced-scaffold na na AZGI01000006.1 = NZ_AZGI01000006.1 Primary Assembly 90029 na NODE_11 unplaced-scaffold na na AZGI01000007.1 = NZ_AZGI01000007.1 Primary Assembly 1744 na NODE_12 unplaced-scaffold na na AZGI01000008.1 = NZ_AZGI01000008.1 Primary Assembly 8856 na NODE_13 unplaced-scaffold na na AZGI01000009.1 = NZ_AZGI01000009.1 Primary Assembly 420 na NODE_14 unplaced-scaffold na na AZGI01000010.1 = NZ_AZGI01000010.1 Primary Assembly 7323 na NODE_15 unplaced-scaffold na na AZGI01000011.1 = NZ_AZGI01000011.1 Primary Assembly 48447 na NODE_16 unplaced-scaffold na na AZGI01000012.1 = NZ_AZGI01000012.1 Primary Assembly 1145 na NODE_17 unplaced-scaffold na na AZGI01000013.1 = NZ_AZGI01000013.1 Primary Assembly 40602 na NODE_18 unplaced-scaffold na na AZGI01000014.1 = NZ_AZGI01000014.1 Primary Assembly 39034 na NODE_19 unplaced-scaffold na na AZGI01000015.1 = NZ_AZGI01000015.1 Primary Assembly 89089 na NODE_20 unplaced-scaffold na na AZGI01000016.1 = NZ_AZGI01000016.1 Primary Assembly 51517 na NODE_21 unplaced-scaffold na na AZGI01000017.1 = NZ_AZGI01000017.1 Primary Assembly 11157 na NODE_22 unplaced-scaffold na na AZGI01000018.1 = NZ_AZGI01000018.1 Primary Assembly 1019 na NODE_23 unplaced-scaffold na na AZGI01000019.1 = NZ_AZGI01000019.1 Primary Assembly 1596 na NODE_24 unplaced-scaffold na na AZGI01000020.1 = NZ_AZGI01000020.1 Primary Assembly 3181 na NODE_25 unplaced-scaffold na na AZGI01000021.1 = NZ_AZGI01000021.1 Primary Assembly 24942 na NODE_27 unplaced-scaffold na na AZGI01000022.1 = NZ_AZGI01000022.1 Primary Assembly 1111 na NODE_28 unplaced-scaffold na na AZGI01000023.1 = NZ_AZGI01000023.1 Primary Assembly 15532 na NODE_29 unplaced-scaffold na na AZGI01000024.1 = NZ_AZGI01000024.1 Primary Assembly 10375 na NODE_30 unplaced-scaffold na na AZGI01000025.1 = NZ_AZGI01000025.1 Primary Assembly 108876 na NODE_31 unplaced-scaffold na na AZGI01000026.1 = NZ_AZGI01000026.1 Primary Assembly 31002 na NODE_34 unplaced-scaffold na na AZGI01000027.1 = NZ_AZGI01000027.1 Primary Assembly 845 na NODE_35 unplaced-scaffold na na AZGI01000028.1 = NZ_AZGI01000028.1 Primary Assembly 31901 na NODE_36 unplaced-scaffold na na AZGI01000029.1 = NZ_AZGI01000029.1 Primary Assembly 26252 na NODE_37 unplaced-scaffold na na AZGI01000030.1 = NZ_AZGI01000030.1 Primary Assembly 25754 na NODE_38 unplaced-scaffold na na AZGI01000031.1 = NZ_AZGI01000031.1 Primary Assembly 6138 na NODE_39 unplaced-scaffold na na AZGI01000032.1 = NZ_AZGI01000032.1 Primary Assembly 12068 na NODE_40 unplaced-scaffold na na AZGI01000033.1 = NZ_AZGI01000033.1 Primary Assembly 69080 na NODE_42 unplaced-scaffold na na AZGI01000034.1 = NZ_AZGI01000034.1 Primary Assembly 6046 na NODE_43 unplaced-scaffold na na AZGI01000035.1 = NZ_AZGI01000035.1 Primary Assembly 7424 na NODE_44 unplaced-scaffold na na AZGI01000036.1 = NZ_AZGI01000036.1 Primary Assembly 582 na NODE_46 unplaced-scaffold na na AZGI01000037.1 = NZ_AZGI01000037.1 Primary Assembly 436 na NODE_47 unplaced-scaffold na na AZGI01000038.1 = NZ_AZGI01000038.1 Primary Assembly 686 na NODE_48 unplaced-scaffold na na AZGI01000039.1 = NZ_AZGI01000039.1 Primary Assembly 1462 na NODE_49 unplaced-scaffold na na AZGI01000040.1 = NZ_AZGI01000040.1 Primary Assembly 11727 na NODE_50 unplaced-scaffold na na AZGI01000041.1 = NZ_AZGI01000041.1 Primary Assembly 8894 na NODE_51 unplaced-scaffold na na AZGI01000042.1 = NZ_AZGI01000042.1 Primary Assembly 3369 na NODE_52 unplaced-scaffold na na AZGI01000043.1 = NZ_AZGI01000043.1 Primary Assembly 21484 na NODE_53 unplaced-scaffold na na AZGI01000044.1 = NZ_AZGI01000044.1 Primary Assembly 27499 na NODE_54 unplaced-scaffold na na AZGI01000045.1 = NZ_AZGI01000045.1 Primary Assembly 44214 na NODE_57 unplaced-scaffold na na AZGI01000046.1 = NZ_AZGI01000046.1 Primary Assembly 1446 na NODE_61 unplaced-scaffold na na AZGI01000047.1 = NZ_AZGI01000047.1 Primary Assembly 37409 na NODE_62 unplaced-scaffold na na AZGI01000048.1 = NZ_AZGI01000048.1 Primary Assembly 951 na NODE_68 unplaced-scaffold na na AZGI01000049.1 = NZ_AZGI01000049.1 Primary Assembly 25038 na NODE_69 unplaced-scaffold na na AZGI01000050.1 = NZ_AZGI01000050.1 Primary Assembly 208 na NODE_71 unplaced-scaffold na na AZGI01000051.1 = NZ_AZGI01000051.1 Primary Assembly 33571 na NODE_72 unplaced-scaffold na na AZGI01000052.1 = NZ_AZGI01000052.1 Primary Assembly 7027 na NODE_73 unplaced-scaffold na na AZGI01000053.1 = NZ_AZGI01000053.1 Primary Assembly 7162 na NODE_79 unplaced-scaffold na na AZGI01000054.1 = NZ_AZGI01000054.1 Primary Assembly 56566 na NODE_80 unplaced-scaffold na na AZGI01000055.1 = NZ_AZGI01000055.1 Primary Assembly 230 na NODE_81 unplaced-scaffold na na AZGI01000056.1 = NZ_AZGI01000056.1 Primary Assembly 428 na NODE_82 unplaced-scaffold na na AZGI01000057.1 = NZ_AZGI01000057.1 Primary Assembly 217 na NODE_86 unplaced-scaffold na na AZGI01000058.1 = NZ_AZGI01000058.1 Primary Assembly 217 na NODE_89 unplaced-scaffold na na AZGI01000059.1 = NZ_AZGI01000059.1 Primary Assembly 59397 na NODE_91 unplaced-scaffold na na AZGI01000060.1 = NZ_AZGI01000060.1 Primary Assembly 566 na NODE_92 unplaced-scaffold na na AZGI01000061.1 = NZ_AZGI01000061.1 Primary Assembly 21788 na NODE_93 unplaced-scaffold na na AZGI01000062.1 = NZ_AZGI01000062.1 Primary Assembly 9670 na NODE_94 unplaced-scaffold na na AZGI01000063.1 = NZ_AZGI01000063.1 Primary Assembly 1171 na NODE_95 unplaced-scaffold na na AZGI01000064.1 = NZ_AZGI01000064.1 Primary Assembly 488 na NODE_96 unplaced-scaffold na na AZGI01000065.1 = NZ_AZGI01000065.1 Primary Assembly 6876 na NODE_98 unplaced-scaffold na na AZGI01000066.1 = NZ_AZGI01000066.1 Primary Assembly 245 na NODE_99 unplaced-scaffold na na AZGI01000067.1 = NZ_AZGI01000067.1 Primary Assembly 252 na NODE_100 unplaced-scaffold na na AZGI01000068.1 = NZ_AZGI01000068.1 Primary Assembly 331 na NODE_102 unplaced-scaffold na na AZGI01000069.1 = NZ_AZGI01000069.1 Primary Assembly 722 na NODE_104 unplaced-scaffold na na AZGI01000070.1 = NZ_AZGI01000070.1 Primary Assembly 261 na NODE_105 unplaced-scaffold na na AZGI01000071.1 = NZ_AZGI01000071.1 Primary Assembly 436 na NODE_106 unplaced-scaffold na na AZGI01000072.1 = NZ_AZGI01000072.1 Primary Assembly 397 na NODE_107 unplaced-scaffold na na AZGI01000073.1 = NZ_AZGI01000073.1 Primary Assembly 14116 na NODE_109 unplaced-scaffold na na AZGI01000074.1 = NZ_AZGI01000074.1 Primary Assembly 242 na NODE_112 unplaced-scaffold na na AZGI01000075.1 = NZ_AZGI01000075.1 Primary Assembly 14389 na NODE_114 unplaced-scaffold na na AZGI01000076.1 = NZ_AZGI01000076.1 Primary Assembly 218 na NODE_117 unplaced-scaffold na na AZGI01000077.1 = NZ_AZGI01000077.1 Primary Assembly 595 na NODE_118 unplaced-scaffold na na AZGI01000078.1 = NZ_AZGI01000078.1 Primary Assembly 308 na NODE_126 unplaced-scaffold na na AZGI01000079.1 = NZ_AZGI01000079.1 Primary Assembly 3859 na NODE_127 unplaced-scaffold na na AZGI01000080.1 = NZ_AZGI01000080.1 Primary Assembly 2599 na NODE_129 unplaced-scaffold na na AZGI01000081.1 = NZ_AZGI01000081.1 Primary Assembly 28378 na NODE_130 unplaced-scaffold na na AZGI01000082.1 = NZ_AZGI01000082.1 Primary Assembly 246 na NODE_131 unplaced-scaffold na na AZGI01000083.1 = NZ_AZGI01000083.1 Primary Assembly 214 na NODE_134 unplaced-scaffold na na AZGI01000084.1 = NZ_AZGI01000084.1 Primary Assembly 316 na NODE_136 unplaced-scaffold na na AZGI01000085.1 = NZ_AZGI01000085.1 Primary Assembly 224 na NODE_140 unplaced-scaffold na na AZGI01000086.1 = NZ_AZGI01000086.1 Primary Assembly 1222 na NODE_147 unplaced-scaffold na na AZGI01000087.1 = NZ_AZGI01000087.1 Primary Assembly 11474 na NODE_150 unplaced-scaffold na na AZGI01000088.1 = NZ_AZGI01000088.1 Primary Assembly 1070 na NODE_173 unplaced-scaffold na na AZGI01000089.1 = NZ_AZGI01000089.1 Primary Assembly 246 na NODE_174 unplaced-scaffold na na AZGI01000090.1 = NZ_AZGI01000090.1 Primary Assembly 112163 na NODE_182 unplaced-scaffold na na AZGI01000091.1 = NZ_AZGI01000091.1 Primary Assembly 10903 na NODE_184 unplaced-scaffold na na AZGI01000092.1 = NZ_AZGI01000092.1 Primary Assembly 48633 na NODE_188 unplaced-scaffold na na AZGI01000093.1 = NZ_AZGI01000093.1 Primary Assembly 34915 na