# Assembly name: ASM143622v1 # Organism name: Lacticaseibacillus sharpeae JCM 1186 = DSM 20505 (firmicutes) # Infraspecific name: strain=DSM 20505 # Taxid: 1291052 # BioSample: SAMN02369377 # BioProject: PRJNA222257 # Submitter: Shanghai Majorbio # Date: 2015-11-06 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: AYYO01 # Assembly method: SOAPdenovo v. 2 # Expected final version: yes # Genome coverage: 100x # Sequencing technology: Illumina MiSeq; Illumina HiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_001436225.1 # RefSeq assembly accession: GCF_001436225.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_001436245.1 GCF_001436245.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name NODE_5 unplaced-scaffold na na AYYO01000001.1 = NZ_AYYO01000001.1 Primary Assembly 47654 na NODE_6 unplaced-scaffold na na AYYO01000002.1 = NZ_AYYO01000002.1 Primary Assembly 1374 na NODE_7 unplaced-scaffold na na AYYO01000003.1 = NZ_AYYO01000003.1 Primary Assembly 187017 na NODE_8 unplaced-scaffold na na AYYO01000004.1 = NZ_AYYO01000004.1 Primary Assembly 3839 na NODE_11 unplaced-scaffold na na AYYO01000005.1 = NZ_AYYO01000005.1 Primary Assembly 98727 na NODE_12 unplaced-scaffold na na AYYO01000006.1 = NZ_AYYO01000006.1 Primary Assembly 52375 na NODE_13 unplaced-scaffold na na AYYO01000007.1 = NZ_AYYO01000007.1 Primary Assembly 15472 na NODE_14 unplaced-scaffold na na AYYO01000008.1 = NZ_AYYO01000008.1 Primary Assembly 48125 na NODE_15 unplaced-scaffold na na AYYO01000009.1 = NZ_AYYO01000009.1 Primary Assembly 91042 na NODE_16 unplaced-scaffold na na AYYO01000010.1 = NZ_AYYO01000010.1 Primary Assembly 189312 na NODE_17 unplaced-scaffold na na AYYO01000011.1 = NZ_AYYO01000011.1 Primary Assembly 89893 na NODE_18 unplaced-scaffold na na AYYO01000012.1 = NZ_AYYO01000012.1 Primary Assembly 45622 na NODE_19 unplaced-scaffold na na AYYO01000013.1 = NZ_AYYO01000013.1 Primary Assembly 33166 na NODE_20 unplaced-scaffold na na AYYO01000014.1 = NZ_AYYO01000014.1 Primary Assembly 79078 na NODE_21 unplaced-scaffold na na AYYO01000015.1 = NZ_AYYO01000015.1 Primary Assembly 1494 na NODE_23 unplaced-scaffold na na AYYO01000016.1 = NZ_AYYO01000016.1 Primary Assembly 58254 na NODE_24 unplaced-scaffold na na AYYO01000017.1 = NZ_AYYO01000017.1 Primary Assembly 50019 na NODE_25 unplaced-scaffold na na AYYO01000018.1 = NZ_AYYO01000018.1 Primary Assembly 1337 na NODE_26 unplaced-scaffold na na AYYO01000019.1 = NZ_AYYO01000019.1 Primary Assembly 43723 na NODE_27 unplaced-scaffold na na AYYO01000020.1 = NZ_AYYO01000020.1 Primary Assembly 1565 na NODE_29 unplaced-scaffold na na AYYO01000021.1 = NZ_AYYO01000021.1 Primary Assembly 21228 na NODE_30 unplaced-scaffold na na AYYO01000022.1 = NZ_AYYO01000022.1 Primary Assembly 77757 na NODE_31 unplaced-scaffold na na AYYO01000023.1 = NZ_AYYO01000023.1 Primary Assembly 48051 na NODE_32 unplaced-scaffold na na AYYO01000024.1 = NZ_AYYO01000024.1 Primary Assembly 78450 na NODE_33 unplaced-scaffold na na AYYO01000025.1 = NZ_AYYO01000025.1 Primary Assembly 208 na NODE_36 unplaced-scaffold na na AYYO01000026.1 = NZ_AYYO01000026.1 Primary Assembly 1232 na NODE_37 unplaced-scaffold na na AYYO01000027.1 = NZ_AYYO01000027.1 Primary Assembly 50996 na NODE_38 unplaced-scaffold na na AYYO01000028.1 = NZ_AYYO01000028.1 Primary Assembly 3055 na NODE_39 unplaced-scaffold na na AYYO01000029.1 = NZ_AYYO01000029.1 Primary Assembly 5098 na NODE_40 unplaced-scaffold na na AYYO01000030.1 = NZ_AYYO01000030.1 Primary Assembly 115248 na NODE_41 unplaced-scaffold na na AYYO01000031.1 = NZ_AYYO01000031.1 Primary Assembly 1550 na NODE_42 unplaced-scaffold na na AYYO01000032.1 = NZ_AYYO01000032.1 Primary Assembly 6371 na NODE_44 unplaced-scaffold na na AYYO01000033.1 = NZ_AYYO01000033.1 Primary Assembly 3564 na NODE_46 unplaced-scaffold na na AYYO01000034.1 = NZ_AYYO01000034.1 Primary Assembly 1877 na NODE_47 unplaced-scaffold na na AYYO01000035.1 = NZ_AYYO01000035.1 Primary Assembly 333 na NODE_48 unplaced-scaffold na na AYYO01000036.1 = NZ_AYYO01000036.1 Primary Assembly 32943 na NODE_49 unplaced-scaffold na na AYYO01000037.1 = NZ_AYYO01000037.1 Primary Assembly 92736 na NODE_50 unplaced-scaffold na na AYYO01000038.1 = NZ_AYYO01000038.1 Primary Assembly 4913 na NODE_52 unplaced-scaffold na na AYYO01000039.1 = NZ_AYYO01000039.1 Primary Assembly 12296 na NODE_64 unplaced-scaffold na na AYYO01000040.1 = NZ_AYYO01000040.1 Primary Assembly 20280 na NODE_65 unplaced-scaffold na na AYYO01000041.1 = NZ_AYYO01000041.1 Primary Assembly 41848 na NODE_67 unplaced-scaffold na na AYYO01000042.1 = NZ_AYYO01000042.1 Primary Assembly 14305 na NODE_69 unplaced-scaffold na na AYYO01000043.1 = NZ_AYYO01000043.1 Primary Assembly 16350 na NODE_71 unplaced-scaffold na na AYYO01000044.1 = NZ_AYYO01000044.1 Primary Assembly 155541 na NODE_74 unplaced-scaffold na na AYYO01000045.1 = NZ_AYYO01000045.1 Primary Assembly 3238 na NODE_77 unplaced-scaffold na na AYYO01000046.1 = NZ_AYYO01000046.1 Primary Assembly 1893 na NODE_78 unplaced-scaffold na na AYYO01000047.1 = NZ_AYYO01000047.1 Primary Assembly 2989 na NODE_81 unplaced-scaffold na na AYYO01000048.1 = NZ_AYYO01000048.1 Primary Assembly 3195 na NODE_84 unplaced-scaffold na na AYYO01000049.1 = NZ_AYYO01000049.1 Primary Assembly 16437 na NODE_90 unplaced-scaffold na na AYYO01000050.1 = NZ_AYYO01000050.1 Primary Assembly 63515 na NODE_93 unplaced-scaffold na na AYYO01000051.1 = NZ_AYYO01000051.1 Primary Assembly 424 na NODE_117 unplaced-scaffold na na AYYO01000052.1 = NZ_AYYO01000052.1 Primary Assembly 245 na NODE_122 unplaced-scaffold na na AYYO01000053.1 = NZ_AYYO01000053.1 Primary Assembly 2481 na NODE_140 unplaced-scaffold na na AYYO01000054.1 = NZ_AYYO01000054.1 Primary Assembly 213 na NODE_141 unplaced-scaffold na na AYYO01000055.1 = NZ_AYYO01000055.1 Primary Assembly 178375 na NODE_142 unplaced-scaffold na na AYYO01000056.1 = NZ_AYYO01000056.1 Primary Assembly 225339 na NODE_147 unplaced-scaffold na na AYYO01000057.1 = NZ_AYYO01000057.1 Primary Assembly 642 na