# Assembly name: TGAM01v2 # Organism name: Trichoderma gamsii (ascomycete fungi) # Infraspecific name: strain=T6085 # Taxid: 398673 # BioSample: SAMN02849381 # BioProject: PRJNA252048 # Submitter: University of Pisa # Date: 2018-02-02 # Assembly type: haploid # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: JPDN02 # Assembly method: SPAdes v. 3.8.2 # Expected final version: yes # Genome coverage: 50.0x # Sequencing technology: Illumina MiSeq # RefSeq category: Representative Genome # GenBank assembly accession: GCA_001481775.2 # RefSeq assembly accession: GCF_001481775.2 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_001481785.2 GCF_001481785.2 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Scaffold_1.2 unplaced-scaffold na na JPDN02000001.1 = NW_020171338.1 Primary Assembly 1830400 na Scaffold_10.2 unplaced-scaffold na na JPDN02000010.1 = NW_020171347.1 Primary Assembly 934585 na Scaffold_100.2 unplaced-scaffold na na JPDN02000101.1 = NW_020171438.1 Primary Assembly 17109 na Scaffold_101.2 unplaced-scaffold na na JPDN02000100.1 = NW_020171437.1 Primary Assembly 17138 na Scaffold_102.2 unplaced-scaffold na na JPDN02000102.1 = NW_020171439.1 Primary Assembly 16741 na Scaffold_103.2 unplaced-scaffold na na JPDN02000103.1 = NW_020171440.1 Primary Assembly 16533 na Scaffold_104.2 unplaced-scaffold na na JPDN02000104.1 = NW_020171441.1 Primary Assembly 14459 na Scaffold_105.2 unplaced-scaffold na na JPDN02000105.1 = NW_020171442.1 Primary Assembly 13906 na Scaffold_106.2 unplaced-scaffold na na JPDN02000106.1 = NW_020171443.1 Primary Assembly 13683 na Scaffold_107.2 unplaced-scaffold na na JPDN02000107.1 = NW_020171444.1 Primary Assembly 12824 na Scaffold_108.2 unplaced-scaffold na na JPDN02000108.1 = NW_020171445.1 Primary Assembly 12397 na Scaffold_109.2 unplaced-scaffold na na JPDN02000109.1 = NW_020171446.1 Primary Assembly 12016 na Scaffold_11.2 unplaced-scaffold na na JPDN02000011.1 = NW_020171348.1 Primary Assembly 880928 na Scaffold_110.2 unplaced-scaffold na na JPDN02000110.1 = NW_020171447.1 Primary Assembly 11499 na Scaffold_111.2 unplaced-scaffold na na JPDN02000111.1 = NW_020171448.1 Primary Assembly 10620 na Scaffold_112.2 unplaced-scaffold na na JPDN02000112.1 = NW_020171449.1 Primary Assembly 10563 na Scaffold_113.2 unplaced-scaffold na na JPDN02000113.1 = NW_020171450.1 Primary Assembly 9521 na Scaffold_114.2 unplaced-scaffold na na JPDN02000114.1 = NW_020171451.1 Primary Assembly 9285 na Scaffold_115.2 unplaced-scaffold na na JPDN02000115.1 = NW_020171452.1 Primary Assembly 8649 na Scaffold_116.2 unplaced-scaffold na na JPDN02000116.1 = NW_020171453.1 Primary Assembly 7997 na Scaffold_117.2 unplaced-scaffold na na JPDN02000117.1 = NW_020171454.1 Primary Assembly 7831 na Scaffold_118.2 unplaced-scaffold na na JPDN02000119.1 = NW_020171456.1 Primary Assembly 7373 na Scaffold_119.2 unplaced-scaffold na na JPDN02000118.1 = NW_020171455.1 Primary Assembly 7395 na Scaffold_12.2 unplaced-scaffold na na JPDN02000012.1 = NW_020171349.1 Primary Assembly 851809 na Scaffold_120.2 unplaced-scaffold na na JPDN02000120.1 = NW_020171457.1 Primary Assembly 7209 na Scaffold_121.2 unplaced-scaffold na na JPDN02000121.1 = NW_020171458.1 Primary Assembly 6934 na Scaffold_122.2 unplaced-scaffold na na JPDN02000122.1 = NW_020171459.1 Primary Assembly 6731 na Scaffold_123.2 unplaced-scaffold na na JPDN02000123.1 = NW_020171460.1 Primary Assembly 6518 na Scaffold_124.2 unplaced-scaffold na na JPDN02000124.1 = NW_020171461.1 Primary Assembly 6515 na Scaffold_125.2 unplaced-scaffold na na JPDN02000125.1 = NW_020171462.1 Primary Assembly 6508 na Scaffold_126.2 unplaced-scaffold na na JPDN02000126.1 = NW_020171463.1 Primary Assembly 5567 na Scaffold_128.2 unplaced-scaffold na na JPDN02000127.1 = NW_020171464.1 Primary Assembly 4885 na Scaffold_129.2 unplaced-scaffold na na JPDN02000128.1 = NW_020171465.1 Primary Assembly 4820 na Scaffold_13.2 unplaced-scaffold na na JPDN02000013.1 = NW_020171350.1 Primary Assembly 830279 na Scaffold_130.2 unplaced-scaffold na na JPDN02000129.1 = NW_020171466.1 Primary Assembly 4776 na Scaffold_131.2 unplaced-scaffold na na JPDN02000130.1 = NW_020171467.1 Primary Assembly 4334 na Scaffold_132.2 unplaced-scaffold na na JPDN02000131.1 = NW_020171468.1 Primary Assembly 4266 na Scaffold_133.2 unplaced-scaffold na na JPDN02000132.1 = NW_020171469.1 Primary Assembly 4099 na Scaffold_134.2 unplaced-scaffold na na JPDN02000133.1 = NW_020171470.1 Primary Assembly 3951 na Scaffold_135.2 unplaced-scaffold na na JPDN02000134.1 = NW_020171471.1 Primary Assembly 3860 na Scaffold_136.2 unplaced-scaffold na na JPDN02000135.1 = NW_020171472.1 Primary Assembly 3777 na Scaffold_137.2 unplaced-scaffold na na JPDN02000136.1 = NW_020171473.1 Primary Assembly 3439 na Scaffold_138.2 unplaced-scaffold na na JPDN02000137.1 = NW_020171474.1 Primary Assembly 3390 na Scaffold_139.2 unplaced-scaffold na na JPDN02000138.1 = NW_020171475.1 Primary Assembly 3379 na Scaffold_14.2 unplaced-scaffold na na JPDN02000014.1 = NW_020171351.1 Primary Assembly 829916 na Scaffold_140.2 unplaced-scaffold na na JPDN02000139.1 = NW_020171476.1 Primary Assembly 3334 na Scaffold_141.2 unplaced-scaffold na na JPDN02000140.1 = NW_020171477.1 Primary Assembly 3221 na Scaffold_142.2 unplaced-scaffold na na JPDN02000142.1 = NW_020171479.1 Primary Assembly 3074 na Scaffold_143.2 unplaced-scaffold na na JPDN02000141.1 = NW_020171478.1 Primary Assembly 3076 na Scaffold_144.2 unplaced-scaffold na na JPDN02000143.1 = NW_020171480.1 Primary Assembly 2914 na Scaffold_145.2 unplaced-scaffold na na JPDN02000144.1 = NW_020171481.1 Primary Assembly 2792 na Scaffold_146.2 unplaced-scaffold na na JPDN02000145.1 = NW_020171482.1 Primary Assembly 2778 na Scaffold_147.2 unplaced-scaffold na na JPDN02000146.1 = NW_020171483.1 Primary Assembly 2643 na Scaffold_148.2 unplaced-scaffold na na JPDN02000147.1 = NW_020171484.1 Primary Assembly 2512 na Scaffold_149.2 unplaced-scaffold na na JPDN02000148.1 = NW_020171485.1 Primary Assembly 2429 na Scaffold_15.2 unplaced-scaffold na na JPDN02000015.1 = NW_020171352.1 Primary Assembly 826040 na Scaffold_150.2 unplaced-scaffold na na JPDN02000149.1 = NW_020171486.1 Primary Assembly 2407 na Scaffold_151.2 unplaced-scaffold na na JPDN02000150.1 = NW_020171487.1 Primary Assembly 2263 na Scaffold_152.2 unplaced-scaffold na na JPDN02000151.1 = NW_020171488.1 Primary Assembly 2252 na Scaffold_153.2 unplaced-scaffold na na JPDN02000152.1 = NW_020171489.1 Primary Assembly 2104 na Scaffold_154.2 unplaced-scaffold na na JPDN02000153.1 = NW_020171490.1 Primary Assembly 2061 na Scaffold_155.2 unplaced-scaffold na na JPDN02000154.1 = NW_020171491.1 Primary Assembly 1954 na Scaffold_156.2 unplaced-scaffold na na JPDN02000155.1 = NW_020171492.1 Primary Assembly 1894 na Scaffold_157.2 unplaced-scaffold na na JPDN02000156.1 = NW_020171493.1 Primary Assembly 1889 na Scaffold_158.2 unplaced-scaffold na na JPDN02000157.1 = NW_020171494.1 Primary Assembly 1880 na Scaffold_159.2 unplaced-scaffold na na JPDN02000158.1 = NW_020171495.1 Primary Assembly 1872 na Scaffold_16.2 unplaced-scaffold na na JPDN02000016.1 = NW_020171353.1 Primary Assembly 780056 na Scaffold_160.2 unplaced-scaffold na na JPDN02000159.1 = NW_020171496.1 Primary Assembly 1791 na Scaffold_161.2 unplaced-scaffold na na JPDN02000160.1 = NW_020171497.1 Primary Assembly 1711 na Scaffold_162.2 unplaced-scaffold na na JPDN02000161.1 = NW_020171498.1 Primary Assembly 1711 na Scaffold_163.2 unplaced-scaffold na na JPDN02000162.1 = NW_020171499.1 Primary Assembly 1662 na Scaffold_164.2 unplaced-scaffold na na JPDN02000163.1 = NW_020171500.1 Primary Assembly 1653 na Scaffold_165.2 unplaced-scaffold na na JPDN02000164.1 = NW_020171501.1 Primary Assembly 1646 na Scaffold_166.2 unplaced-scaffold na na JPDN02000165.1 = NW_020171502.1 Primary Assembly 1640 na Scaffold_167.2 unplaced-scaffold na na JPDN02000166.1 = NW_020171503.1 Primary Assembly 1509 na Scaffold_168.2 unplaced-scaffold na na JPDN02000167.1 = NW_020171504.1 Primary Assembly 1480 na Scaffold_169.2 unplaced-scaffold na na JPDN02000168.1 = NW_020171505.1 Primary Assembly 1328 na Scaffold_17.2 unplaced-scaffold na na JPDN02000017.1 = NW_020171354.1 Primary Assembly 702779 na Scaffold_170.2 unplaced-scaffold na na JPDN02000169.1 = NW_020171506.1 Primary Assembly 1310 na Scaffold_171.2 unplaced-scaffold na na JPDN02000170.1 = NW_020171507.1 Primary Assembly 1230 na Scaffold_172.2 unplaced-scaffold na na JPDN02000171.1 = NW_020171508.1 Primary Assembly 1068 na Scaffold_173.2 unplaced-scaffold na na JPDN02000172.1 = NW_020171509.1 Primary Assembly 1023 na Scaffold_18.2 unplaced-scaffold na na JPDN02000018.1 = NW_020171355.1 Primary Assembly 697391 na Scaffold_19.2 unplaced-scaffold na na JPDN02000019.1 = NW_020171356.1 Primary Assembly 687281 na Scaffold_2.2 unplaced-scaffold na na JPDN02000002.1 = NW_020171339.1 Primary Assembly 1710302 na Scaffold_20.2 unplaced-scaffold na na JPDN02000020.1 = NW_020171357.1 Primary Assembly 676739 na Scaffold_21.2 unplaced-scaffold na na JPDN02000021.1 = NW_020171358.1 Primary Assembly 673579 na Scaffold_22.2 unplaced-scaffold na na JPDN02000022.1 = NW_020171359.1 Primary Assembly 632956 na Scaffold_23.2 unplaced-scaffold na na JPDN02000023.1 = NW_020171360.1 Primary Assembly 601520 na Scaffold_24.2 unplaced-scaffold na na JPDN02000024.1 = NW_020171361.1 Primary Assembly 571579 na Scaffold_25.2 unplaced-scaffold na na JPDN02000025.1 = NW_020171362.1 Primary Assembly 543409 na Scaffold_26.2 unplaced-scaffold na na JPDN02000026.1 = NW_020171363.1 Primary Assembly 541099 na Scaffold_27.2 unplaced-scaffold na na JPDN02000027.1 = NW_020171364.1 Primary Assembly 534031 na Scaffold_28.2 unplaced-scaffold na na JPDN02000028.1 = NW_020171365.1 Primary Assembly 496733 na Scaffold_29.2 unplaced-scaffold na na JPDN02000029.1 = NW_020171366.1 Primary Assembly 486107 na Scaffold_3.2 unplaced-scaffold na na JPDN02000003.1 = NW_020171340.1 Primary Assembly 1534703 na Scaffold_30.2 unplaced-scaffold na na JPDN02000030.1 = NW_020171367.1 Primary Assembly 440006 na Scaffold_31.2 unplaced-scaffold na na JPDN02000031.1 = NW_020171368.1 Primary Assembly 416161 na Scaffold_32.2 unplaced-scaffold na na JPDN02000032.1 = NW_020171369.1 Primary Assembly 387184 na Scaffold_33.2 unplaced-scaffold na na JPDN02000033.1 = NW_020171370.1 Primary Assembly 375046 na Scaffold_34.2 unplaced-scaffold na na JPDN02000034.1 = NW_020171371.1 Primary Assembly 373527 na Scaffold_35.2 unplaced-scaffold na na JPDN02000035.1 = NW_020171372.1 Primary Assembly 366839 na Scaffold_36.2 unplaced-scaffold na na JPDN02000036.1 = NW_020171373.1 Primary Assembly 353419 na Scaffold_37.2 unplaced-scaffold na na JPDN02000037.1 = NW_020171374.1 Primary Assembly 347232 na Scaffold_38.2 unplaced-scaffold na na JPDN02000038.1 = NW_020171375.1 Primary Assembly 346848 na Scaffold_39.2 unplaced-scaffold na na JPDN02000039.1 = NW_020171376.1 Primary Assembly 342359 na Scaffold_4.2 unplaced-scaffold na na JPDN02000004.1 = NW_020171341.1 Primary Assembly 1499607 na Scaffold_40.2 unplaced-scaffold na na JPDN02000040.1 = NW_020171377.1 Primary Assembly 319338 na Scaffold_41.2 unplaced-scaffold na na JPDN02000041.1 = NW_020171378.1 Primary Assembly 306888 na Scaffold_42.2 unplaced-scaffold na na JPDN02000042.1 = NW_020171379.1 Primary Assembly 302879 na Scaffold_43.2 unplaced-scaffold na na JPDN02000043.1 = NW_020171380.1 Primary Assembly 278528 na Scaffold_44.2 unplaced-scaffold na na JPDN02000044.1 = NW_020171381.1 Primary Assembly 272581 na Scaffold_45.2 unplaced-scaffold na na JPDN02000045.1 = NW_020171382.1 Primary Assembly 253825 na Scaffold_46.2 unplaced-scaffold na na JPDN02000046.1 = NW_020171383.1 Primary Assembly 250542 na Scaffold_47.2 unplaced-scaffold na na JPDN02000047.1 = NW_020171384.1 Primary Assembly 241653 na Scaffold_48.2 unplaced-scaffold na na JPDN02000048.1 = NW_020171385.1 Primary Assembly 240401 na Scaffold_49.2 unplaced-scaffold na na JPDN02000049.1 = NW_020171386.1 Primary Assembly 229821 na Scaffold_5.2 unplaced-scaffold na na JPDN02000005.1 = NW_020171342.1 Primary Assembly 1402731 na Scaffold_50.2 unplaced-scaffold na na JPDN02000050.1 = NW_020171387.1 Primary Assembly 226051 na Scaffold_51.2 unplaced-scaffold na na JPDN02000051.1 = NW_020171388.1 Primary Assembly 222589 na Scaffold_52.2 unplaced-scaffold na na JPDN02000052.1 = NW_020171389.1 Primary Assembly 215524 na Scaffold_53.2 unplaced-scaffold na na JPDN02000053.1 = NW_020171390.1 Primary Assembly 211073 na Scaffold_54.2 unplaced-scaffold na na JPDN02000054.1 = NW_020171391.1 Primary Assembly 206451 na Scaffold_55.2 unplaced-scaffold na na JPDN02000055.1 = NW_020171392.1 Primary Assembly 184594 na Scaffold_56.2 unplaced-scaffold na na JPDN02000056.1 = NW_020171393.1 Primary Assembly 182966 na Scaffold_57.2 unplaced-scaffold na na JPDN02000057.1 = NW_020171394.1 Primary Assembly 181086 na Scaffold_58.2 unplaced-scaffold na na JPDN02000058.1 = NW_020171395.1 Primary Assembly 179346 na Scaffold_59.2 unplaced-scaffold na na JPDN02000059.1 = NW_020171396.1 Primary Assembly 177996 na Scaffold_6.2 unplaced-scaffold na na JPDN02000006.1 = NW_020171343.1 Primary Assembly 1098913 na Scaffold_60.2 unplaced-scaffold na na JPDN02000060.1 = NW_020171397.1 Primary Assembly 170513 na Scaffold_61.2 unplaced-scaffold na na JPDN02000061.1 = NW_020171398.1 Primary Assembly 165395 na Scaffold_62.2 unplaced-scaffold na na JPDN02000062.1 = NW_020171399.1 Primary Assembly 160443 na Scaffold_63.2 unplaced-scaffold na na JPDN02000063.1 = NW_020171400.1 Primary Assembly 144741 na Scaffold_64.2 unplaced-scaffold na na JPDN02000064.1 = NW_020171401.1 Primary Assembly 135584 na Scaffold_65.2 unplaced-scaffold na na JPDN02000065.1 = NW_020171402.1 Primary Assembly 133725 na Scaffold_66.2 unplaced-scaffold na na JPDN02000066.1 = NW_020171403.1 Primary Assembly 128829 na Scaffold_67.2 unplaced-scaffold na na JPDN02000067.1 = NW_020171404.1 Primary Assembly 125597 na Scaffold_68.2 unplaced-scaffold na na JPDN02000068.1 = NW_020171405.1 Primary Assembly 114733 na Scaffold_69.2 unplaced-scaffold na na JPDN02000069.1 = NW_020171406.1 Primary Assembly 111993 na Scaffold_7.2 unplaced-scaffold na na JPDN02000007.1 = NW_020171344.1 Primary Assembly 1077425 na Scaffold_70.2 unplaced-scaffold na na JPDN02000070.1 = NW_020171407.1 Primary Assembly 107249 na Scaffold_71.2 unplaced-scaffold na na JPDN02000071.1 = NW_020171408.1 Primary Assembly 99142 na Scaffold_72.2 unplaced-scaffold na na JPDN02000072.1 = NW_020171409.1 Primary Assembly 89022 na Scaffold_73.2 unplaced-scaffold na na JPDN02000073.1 = NW_020171410.1 Primary Assembly 87285 na Scaffold_74.2 unplaced-scaffold na na JPDN02000074.1 = NW_020171411.1 Primary Assembly 86882 na Scaffold_75.2 unplaced-scaffold na na JPDN02000075.1 = NW_020171412.1 Primary Assembly 85792 na Scaffold_76.2 unplaced-scaffold na na JPDN02000076.1 = NW_020171413.1 Primary Assembly 80156 na Scaffold_77.2 unplaced-scaffold na na JPDN02000077.1 = NW_020171414.1 Primary Assembly 77599 na Scaffold_78.2 unplaced-scaffold na na JPDN02000078.1 = NW_020171415.1 Primary Assembly 76596 na Scaffold_79.2 unplaced-scaffold na na JPDN02000079.1 = NW_020171416.1 Primary Assembly 75850 na Scaffold_8.2 unplaced-scaffold na na JPDN02000008.1 = NW_020171345.1 Primary Assembly 1061107 na Scaffold_80.2 unplaced-scaffold na na JPDN02000080.1 = NW_020171417.1 Primary Assembly 75732 na Scaffold_81.2 unplaced-scaffold na na JPDN02000081.1 = NW_020171418.1 Primary Assembly 62243 na Scaffold_82.2 unplaced-scaffold na na JPDN02000082.1 = NW_020171419.1 Primary Assembly 60583 na Scaffold_83.2 unplaced-scaffold na na JPDN02000083.1 = NW_020171420.1 Primary Assembly 59792 na Scaffold_84.2 unplaced-scaffold na na JPDN02000084.1 = NW_020171421.1 Primary Assembly 59162 na Scaffold_85.2 unplaced-scaffold na na JPDN02000085.1 = NW_020171422.1 Primary Assembly 56578 na Scaffold_86.2 unplaced-scaffold na na JPDN02000086.1 = NW_020171423.1 Primary Assembly 47222 na Scaffold_87.2 unplaced-scaffold na na JPDN02000087.1 = NW_020171424.1 Primary Assembly 43337 na Scaffold_88.2 unplaced-scaffold na na JPDN02000088.1 = NW_020171425.1 Primary Assembly 41586 na Scaffold_89.2 unplaced-scaffold na na JPDN02000089.1 = NW_020171426.1 Primary Assembly 35694 na Scaffold_9.2 unplaced-scaffold na na JPDN02000009.1 = NW_020171346.1 Primary Assembly 1046289 na Scaffold_90.2 unplaced-scaffold na na JPDN02000090.1 = NW_020171427.1 Primary Assembly 32390 na Scaffold_91.2 unplaced-scaffold na na JPDN02000091.1 = NW_020171428.1 Primary Assembly 29939 na Scaffold_92.2 unplaced-scaffold na na JPDN02000092.1 = NW_020171429.1 Primary Assembly 26384 na Scaffold_93.2 unplaced-scaffold na na JPDN02000093.1 = NW_020171430.1 Primary Assembly 26131 na Scaffold_94.2 unplaced-scaffold na na JPDN02000094.1 = NW_020171431.1 Primary Assembly 21558 na Scaffold_95.2 unplaced-scaffold na na JPDN02000095.1 = NW_020171432.1 Primary Assembly 20447 na Scaffold_96.2 unplaced-scaffold na na JPDN02000096.1 = NW_020171433.1 Primary Assembly 19681 na Scaffold_97.2 unplaced-scaffold na na JPDN02000097.1 = NW_020171434.1 Primary Assembly 19381 na Scaffold_98.2 unplaced-scaffold na na JPDN02000098.1 = NW_020171435.1 Primary Assembly 19283 na Scaffold_99.2 unplaced-scaffold na na JPDN02000099.1 = NW_020171436.1 Primary Assembly 18348 na