# Assembly name: ASM161312v1 # Organism name: Nocardia shimofusensis NBRC 100134 (high G+C Gram-positive bacteria) # Infraspecific name: strain=NBRC 100134 # Taxid: 1210087 # BioSample: SAMD00040665 # BioProject: PRJDB174 # Submitter: National Institute of Technology and Evaluation # Date: 2016-04-01 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: BDBT01 # Assembly method: newbler v. 2.6 # Genome coverage: 124x # Sequencing technology: 454 GS-FLX Titanium; Illumina HiSeq 1000 # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_001613125.1 # RefSeq assembly accession: GCF_001613125.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_001613135.1 GCF_001613135.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name BDBT01000001.1 unplaced-scaffold na na BDBT01000001.1 = NZ_BDBT01000001.1 Primary Assembly 480128 na BDBT01000002.1 unplaced-scaffold na na BDBT01000002.1 = NZ_BDBT01000002.1 Primary Assembly 393638 na BDBT01000003.1 unplaced-scaffold na na BDBT01000003.1 = NZ_BDBT01000003.1 Primary Assembly 393477 na BDBT01000004.1 unplaced-scaffold na na BDBT01000004.1 = NZ_BDBT01000004.1 Primary Assembly 353697 na BDBT01000005.1 unplaced-scaffold na na BDBT01000005.1 = NZ_BDBT01000005.1 Primary Assembly 309312 na BDBT01000006.1 unplaced-scaffold na na BDBT01000006.1 = NZ_BDBT01000006.1 Primary Assembly 290327 na BDBT01000007.1 unplaced-scaffold na na BDBT01000007.1 = NZ_BDBT01000007.1 Primary Assembly 263435 na BDBT01000008.1 unplaced-scaffold na na BDBT01000008.1 = NZ_BDBT01000008.1 Primary Assembly 262129 na BDBT01000009.1 unplaced-scaffold na na BDBT01000009.1 = NZ_BDBT01000009.1 Primary Assembly 236582 na BDBT01000010.1 unplaced-scaffold na na BDBT01000010.1 = NZ_BDBT01000010.1 Primary Assembly 234256 na BDBT01000011.1 unplaced-scaffold na na BDBT01000011.1 = NZ_BDBT01000011.1 Primary Assembly 212320 na BDBT01000012.1 unplaced-scaffold na na BDBT01000012.1 = NZ_BDBT01000012.1 Primary Assembly 206942 na BDBT01000013.1 unplaced-scaffold na na BDBT01000013.1 = NZ_BDBT01000013.1 Primary Assembly 157011 na BDBT01000014.1 unplaced-scaffold na na BDBT01000014.1 = NZ_BDBT01000014.1 Primary Assembly 154352 na BDBT01000015.1 unplaced-scaffold na na BDBT01000015.1 = NZ_BDBT01000015.1 Primary Assembly 132579 na BDBT01000016.1 unplaced-scaffold na na BDBT01000016.1 = NZ_BDBT01000016.1 Primary Assembly 2862 na BDBT01000017.1 unplaced-scaffold na na BDBT01000017.1 = NZ_BDBT01000017.1 Primary Assembly 12988 na BDBT01000018.1 unplaced-scaffold na na BDBT01000018.1 = NZ_BDBT01000018.1 Primary Assembly 143599 na BDBT01000019.1 unplaced-scaffold na na BDBT01000019.1 = NZ_BDBT01000019.1 Primary Assembly 125377 na BDBT01000020.1 unplaced-scaffold na na BDBT01000020.1 = NZ_BDBT01000020.1 Primary Assembly 120886 na BDBT01000021.1 unplaced-scaffold na na BDBT01000021.1 = NZ_BDBT01000021.1 Primary Assembly 48767 na BDBT01000022.1 unplaced-scaffold na na BDBT01000022.1 = NZ_BDBT01000022.1 Primary Assembly 71698 na BDBT01000023.1 unplaced-scaffold na na BDBT01000023.1 = NZ_BDBT01000023.1 Primary Assembly 117885 na BDBT01000024.1 unplaced-scaffold na na BDBT01000024.1 = NZ_BDBT01000024.1 Primary Assembly 117225 na BDBT01000025.1 unplaced-scaffold na na BDBT01000025.1 = NZ_BDBT01000025.1 Primary Assembly 109718 na BDBT01000026.1 unplaced-scaffold na na BDBT01000026.1 = NZ_BDBT01000026.1 Primary Assembly 104966 na BDBT01000027.1 unplaced-scaffold na na BDBT01000027.1 = NZ_BDBT01000027.1 Primary Assembly 104438 na BDBT01000028.1 unplaced-scaffold na na BDBT01000028.1 = NZ_BDBT01000028.1 Primary Assembly 82820 na BDBT01000029.1 unplaced-scaffold na na BDBT01000029.1 = NZ_BDBT01000029.1 Primary Assembly 80103 na BDBT01000030.1 unplaced-scaffold na na BDBT01000030.1 = NZ_BDBT01000030.1 Primary Assembly 79904 na BDBT01000031.1 unplaced-scaffold na na BDBT01000031.1 = NZ_BDBT01000031.1 Primary Assembly 76698 na BDBT01000032.1 unplaced-scaffold na na BDBT01000032.1 = NZ_BDBT01000032.1 Primary Assembly 76012 na BDBT01000033.1 unplaced-scaffold na na BDBT01000033.1 = NZ_BDBT01000033.1 Primary Assembly 68757 na BDBT01000034.1 unplaced-scaffold na na BDBT01000034.1 = NZ_BDBT01000034.1 Primary Assembly 67103 na BDBT01000035.1 unplaced-scaffold na na BDBT01000035.1 = NZ_BDBT01000035.1 Primary Assembly 57243 na BDBT01000036.1 unplaced-scaffold na na BDBT01000036.1 = NZ_BDBT01000036.1 Primary Assembly 52389 na BDBT01000037.1 unplaced-scaffold na na BDBT01000037.1 = NZ_BDBT01000037.1 Primary Assembly 42404 na BDBT01000038.1 unplaced-scaffold na na BDBT01000038.1 = NZ_BDBT01000038.1 Primary Assembly 39894 na BDBT01000039.1 unplaced-scaffold na na BDBT01000039.1 = NZ_BDBT01000039.1 Primary Assembly 37629 na BDBT01000040.1 unplaced-scaffold na na BDBT01000040.1 = NZ_BDBT01000040.1 Primary Assembly 33054 na BDBT01000041.1 unplaced-scaffold na na BDBT01000041.1 = NZ_BDBT01000041.1 Primary Assembly 32175 na BDBT01000042.1 unplaced-scaffold na na BDBT01000042.1 = NZ_BDBT01000042.1 Primary Assembly 31823 na BDBT01000043.1 unplaced-scaffold na na BDBT01000043.1 = NZ_BDBT01000043.1 Primary Assembly 29834 na BDBT01000044.1 unplaced-scaffold na na BDBT01000044.1 = NZ_BDBT01000044.1 Primary Assembly 28274 na BDBT01000045.1 unplaced-scaffold na na BDBT01000045.1 = NZ_BDBT01000045.1 Primary Assembly 27931 na BDBT01000046.1 unplaced-scaffold na na BDBT01000046.1 = NZ_BDBT01000046.1 Primary Assembly 26150 na BDBT01000047.1 unplaced-scaffold na na BDBT01000047.1 = NZ_BDBT01000047.1 Primary Assembly 25843 na BDBT01000048.1 unplaced-scaffold na na BDBT01000048.1 = NZ_BDBT01000048.1 Primary Assembly 22283 na BDBT01000049.1 unplaced-scaffold na na BDBT01000049.1 = NZ_BDBT01000049.1 Primary Assembly 21465 na BDBT01000050.1 unplaced-scaffold na na BDBT01000050.1 = NZ_BDBT01000050.1 Primary Assembly 20121 na BDBT01000051.1 unplaced-scaffold na na BDBT01000051.1 = NZ_BDBT01000051.1 Primary Assembly 17964 na BDBT01000052.1 unplaced-scaffold na na BDBT01000052.1 = NZ_BDBT01000052.1 Primary Assembly 17329 na BDBT01000053.1 unplaced-scaffold na na BDBT01000053.1 = NZ_BDBT01000053.1 Primary Assembly 12594 na BDBT01000054.1 unplaced-scaffold na na BDBT01000054.1 = NZ_BDBT01000054.1 Primary Assembly 10098 na BDBT01000055.1 unplaced-scaffold na na BDBT01000055.1 = NZ_BDBT01000055.1 Primary Assembly 3227 na BDBT01000056.1 unplaced-scaffold na na BDBT01000056.1 = NZ_BDBT01000056.1 Primary Assembly 6320 na BDBT01000057.1 unplaced-scaffold na na BDBT01000057.1 = NZ_BDBT01000057.1 Primary Assembly 7442 na BDBT01000058.1 unplaced-scaffold na na BDBT01000058.1 = NZ_BDBT01000058.1 Primary Assembly 986 na BDBT01000059.1 unplaced-scaffold na na BDBT01000059.1 = NZ_BDBT01000059.1 Primary Assembly 4287 na BDBT01000060.1 unplaced-scaffold na na BDBT01000060.1 = NZ_BDBT01000060.1 Primary Assembly 5407 na BDBT01000061.1 unplaced-scaffold na na BDBT01000061.1 = NZ_BDBT01000061.1 Primary Assembly 3771 na BDBT01000062.1 unplaced-scaffold na na BDBT01000062.1 = NZ_BDBT01000062.1 Primary Assembly 3124 na BDBT01000063.1 unplaced-scaffold na na BDBT01000063.1 = NZ_BDBT01000063.1 Primary Assembly 2937 na BDBT01000064.1 unplaced-scaffold na na BDBT01000064.1 = NZ_BDBT01000064.1 Primary Assembly 2470 na BDBT01000065.1 unplaced-scaffold na na BDBT01000065.1 = NZ_BDBT01000065.1 Primary Assembly 2114 na BDBT01000066.1 unplaced-scaffold na na BDBT01000066.1 = NZ_BDBT01000066.1 Primary Assembly 1754 na BDBT01000067.1 unplaced-scaffold na na BDBT01000067.1 = NZ_BDBT01000067.1 Primary Assembly 1400 na BDBT01000068.1 unplaced-scaffold na na BDBT01000068.1 = NZ_BDBT01000068.1 Primary Assembly 1292 na BDBT01000069.1 unplaced-scaffold na na BDBT01000069.1 = NZ_BDBT01000069.1 Primary Assembly 1279 na BDBT01000070.1 unplaced-scaffold na na BDBT01000070.1 = NZ_BDBT01000070.1 Primary Assembly 1276 na BDBT01000071.1 unplaced-scaffold na na BDBT01000071.1 = NZ_BDBT01000071.1 Primary Assembly 852 na BDBT01000072.1 unplaced-scaffold na na BDBT01000072.1 = NZ_BDBT01000072.1 Primary Assembly 1060 na BDBT01000073.1 unplaced-scaffold na na BDBT01000073.1 = NZ_BDBT01000073.1 Primary Assembly 877 na BDBT01000074.1 unplaced-scaffold na na BDBT01000074.1 = NZ_BDBT01000074.1 Primary Assembly 668 na BDBT01000075.1 unplaced-scaffold na na BDBT01000075.1 = NZ_BDBT01000075.1 Primary Assembly 650 na