# Assembly name: ASM164727v1 # Organism name: Rufibacter ruber (CFB group bacteria) # Infraspecific name: strain=CCM 8646 # Taxid: 1783499 # BioSample: SAMN04419562 # BioProject: PRJNA309044 # Submitter: Masaryk University # Date: 2016-05-02 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: LRMM01 # Assembly method: SPAdes v. 5.0.0.0 # Expected final version: yes # Genome coverage: 70.0x # Sequencing technology: IonTorrent # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_001647275.1 # RefSeq assembly accession: GCF_001647275.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_001647305.1 GCF_001647305.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name contig_1 unplaced-scaffold na na LRMM01000001.1 = NZ_LRMM01000001.1 Primary Assembly 250496 na contig_2 unplaced-scaffold na na LRMM01000002.1 = NZ_LRMM01000002.1 Primary Assembly 172723 na contig_3 unplaced-scaffold na na LRMM01000003.1 = NZ_LRMM01000003.1 Primary Assembly 167370 na contig_4 unplaced-scaffold na na LRMM01000004.1 = NZ_LRMM01000004.1 Primary Assembly 147281 na contig_5 unplaced-scaffold na na LRMM01000005.1 = NZ_LRMM01000005.1 Primary Assembly 145104 na contig_6 unplaced-scaffold na na LRMM01000006.1 = NZ_LRMM01000006.1 Primary Assembly 138195 na contig_7 unplaced-scaffold na na LRMM01000007.1 = NZ_LRMM01000007.1 Primary Assembly 132271 na contig_8 unplaced-scaffold na na LRMM01000008.1 = NZ_LRMM01000008.1 Primary Assembly 131836 na contig_9 unplaced-scaffold na na LRMM01000009.1 = NZ_LRMM01000009.1 Primary Assembly 119471 na contig_10 unplaced-scaffold na na LRMM01000010.1 = NZ_LRMM01000010.1 Primary Assembly 107997 na contig_11 unplaced-scaffold na na LRMM01000011.1 = NZ_LRMM01000011.1 Primary Assembly 106730 na contig_12 unplaced-scaffold na na LRMM01000012.1 = NZ_LRMM01000012.1 Primary Assembly 103447 na contig_13 unplaced-scaffold na na LRMM01000013.1 = NZ_LRMM01000013.1 Primary Assembly 92763 na contig_14 unplaced-scaffold na na LRMM01000014.1 = NZ_LRMM01000014.1 Primary Assembly 91471 na contig_15 unplaced-scaffold na na LRMM01000015.1 = NZ_LRMM01000015.1 Primary Assembly 89923 na contig_16 unplaced-scaffold na na LRMM01000016.1 = NZ_LRMM01000016.1 Primary Assembly 87609 na contig_17 unplaced-scaffold na na LRMM01000017.1 = NZ_LRMM01000017.1 Primary Assembly 87040 na contig_18 unplaced-scaffold na na LRMM01000018.1 = NZ_LRMM01000018.1 Primary Assembly 86671 na contig_19 unplaced-scaffold na na LRMM01000019.1 = NZ_LRMM01000019.1 Primary Assembly 83504 na contig_20 unplaced-scaffold na na LRMM01000020.1 = NZ_LRMM01000020.1 Primary Assembly 81680 na contig_21 unplaced-scaffold na na LRMM01000021.1 = NZ_LRMM01000021.1 Primary Assembly 81029 na contig_22 unplaced-scaffold na na LRMM01000022.1 = NZ_LRMM01000022.1 Primary Assembly 78116 na contig_23 unplaced-scaffold na na LRMM01000023.1 = NZ_LRMM01000023.1 Primary Assembly 75710 na contig_24 unplaced-scaffold na na LRMM01000024.1 = NZ_LRMM01000024.1 Primary Assembly 68184 na contig_25 unplaced-scaffold na na LRMM01000025.1 = NZ_LRMM01000025.1 Primary Assembly 66107 na contig_26 unplaced-scaffold na na LRMM01000026.1 = NZ_LRMM01000026.1 Primary Assembly 64603 na contig_27 unplaced-scaffold na na LRMM01000027.1 = NZ_LRMM01000027.1 Primary Assembly 63826 na contig_28 unplaced-scaffold na na LRMM01000028.1 = NZ_LRMM01000028.1 Primary Assembly 62380 na contig_29 unplaced-scaffold na na LRMM01000029.1 = NZ_LRMM01000029.1 Primary Assembly 56494 na contig_30 unplaced-scaffold na na LRMM01000030.1 = NZ_LRMM01000030.1 Primary Assembly 53852 na contig_31 unplaced-scaffold na na LRMM01000031.1 = NZ_LRMM01000031.1 Primary Assembly 51594 na contig_32 unplaced-scaffold na na LRMM01000032.1 = NZ_LRMM01000032.1 Primary Assembly 50174 na contig_33 unplaced-scaffold na na LRMM01000033.1 = NZ_LRMM01000033.1 Primary Assembly 50115 na contig_34 unplaced-scaffold na na LRMM01000034.1 = NZ_LRMM01000034.1 Primary Assembly 49967 na contig_35 unplaced-scaffold na na LRMM01000035.1 = NZ_LRMM01000035.1 Primary Assembly 49528 na contig_36 unplaced-scaffold na na LRMM01000036.1 = NZ_LRMM01000036.1 Primary Assembly 45243 na contig_37 unplaced-scaffold na na LRMM01000037.1 = NZ_LRMM01000037.1 Primary Assembly 45145 na contig_38 unplaced-scaffold na na LRMM01000038.1 = NZ_LRMM01000038.1 Primary Assembly 45143 na contig_39 unplaced-scaffold na na LRMM01000039.1 = NZ_LRMM01000039.1 Primary Assembly 43809 na contig_40 unplaced-scaffold na na LRMM01000040.1 = NZ_LRMM01000040.1 Primary Assembly 42943 na contig_41 unplaced-scaffold na na LRMM01000041.1 = NZ_LRMM01000041.1 Primary Assembly 41780 na contig_42 unplaced-scaffold na na LRMM01000042.1 = NZ_LRMM01000042.1 Primary Assembly 41632 na contig_43 unplaced-scaffold na na LRMM01000043.1 = NZ_LRMM01000043.1 Primary Assembly 41252 na contig_44 unplaced-scaffold na na LRMM01000044.1 = NZ_LRMM01000044.1 Primary Assembly 41127 na contig_45 unplaced-scaffold na na LRMM01000045.1 = NZ_LRMM01000045.1 Primary Assembly 41066 na contig_46 unplaced-scaffold na na LRMM01000046.1 = NZ_LRMM01000046.1 Primary Assembly 41010 na contig_47 unplaced-scaffold na na LRMM01000047.1 = NZ_LRMM01000047.1 Primary Assembly 40389 na contig_48 unplaced-scaffold na na LRMM01000048.1 = NZ_LRMM01000048.1 Primary Assembly 39889 na contig_49 unplaced-scaffold na na LRMM01000049.1 = NZ_LRMM01000049.1 Primary Assembly 39720 na contig_50 unplaced-scaffold na na LRMM01000050.1 = NZ_LRMM01000050.1 Primary Assembly 39683 na contig_51 unplaced-scaffold na na LRMM01000051.1 = NZ_LRMM01000051.1 Primary Assembly 39656 na contig_52 unplaced-scaffold na na LRMM01000052.1 = NZ_LRMM01000052.1 Primary Assembly 39542 na contig_53 unplaced-scaffold na na LRMM01000053.1 = NZ_LRMM01000053.1 Primary Assembly 38466 na contig_54 unplaced-scaffold na na LRMM01000054.1 = NZ_LRMM01000054.1 Primary Assembly 38196 na contig_55 unplaced-scaffold na na LRMM01000055.1 = NZ_LRMM01000055.1 Primary Assembly 36638 na contig_56 unplaced-scaffold na na LRMM01000056.1 = NZ_LRMM01000056.1 Primary Assembly 36412 na contig_57 unplaced-scaffold na na LRMM01000057.1 = NZ_LRMM01000057.1 Primary Assembly 36199 na contig_58 unplaced-scaffold na na LRMM01000058.1 = NZ_LRMM01000058.1 Primary Assembly 35841 na contig_59 unplaced-scaffold na na LRMM01000059.1 = NZ_LRMM01000059.1 Primary Assembly 34694 na contig_60 unplaced-scaffold na na LRMM01000060.1 = NZ_LRMM01000060.1 Primary Assembly 33898 na contig_61 unplaced-scaffold na na LRMM01000061.1 = NZ_LRMM01000061.1 Primary Assembly 33821 na contig_62 unplaced-scaffold na na LRMM01000062.1 = NZ_LRMM01000062.1 Primary Assembly 32476 na contig_63 unplaced-scaffold na na LRMM01000063.1 = NZ_LRMM01000063.1 Primary Assembly 31502 na contig_64 unplaced-scaffold na na LRMM01000064.1 = NZ_LRMM01000064.1 Primary Assembly 30917 na contig_65 unplaced-scaffold na na LRMM01000065.1 = NZ_LRMM01000065.1 Primary Assembly 29972 na contig_66 unplaced-scaffold na na LRMM01000066.1 = NZ_LRMM01000066.1 Primary Assembly 29845 na contig_67 unplaced-scaffold na na LRMM01000067.1 = NZ_LRMM01000067.1 Primary Assembly 29310 na contig_68 unplaced-scaffold na na LRMM01000068.1 = NZ_LRMM01000068.1 Primary Assembly 28440 na contig_69 unplaced-scaffold na na LRMM01000069.1 = NZ_LRMM01000069.1 Primary Assembly 27795 na contig_70 unplaced-scaffold na na LRMM01000070.1 = NZ_LRMM01000070.1 Primary Assembly 27211 na contig_71 unplaced-scaffold na na LRMM01000071.1 = NZ_LRMM01000071.1 Primary Assembly 26969 na contig_72 unplaced-scaffold na na LRMM01000072.1 = NZ_LRMM01000072.1 Primary Assembly 26703 na contig_73 unplaced-scaffold na na LRMM01000073.1 = NZ_LRMM01000073.1 Primary Assembly 24746 na contig_74 unplaced-scaffold na na LRMM01000074.1 = NZ_LRMM01000074.1 Primary Assembly 24335 na contig_75 unplaced-scaffold na na LRMM01000075.1 = NZ_LRMM01000075.1 Primary Assembly 24264 na contig_76 unplaced-scaffold na na LRMM01000076.1 = NZ_LRMM01000076.1 Primary Assembly 23507 na contig_77 unplaced-scaffold na na LRMM01000077.1 = NZ_LRMM01000077.1 Primary Assembly 23104 na contig_78 unplaced-scaffold na na LRMM01000078.1 = NZ_LRMM01000078.1 Primary Assembly 21522 na contig_79 unplaced-scaffold na na LRMM01000079.1 = NZ_LRMM01000079.1 Primary Assembly 20963 na contig_80 unplaced-scaffold na na LRMM01000080.1 = NZ_LRMM01000080.1 Primary Assembly 19387 na contig_81 unplaced-scaffold na na LRMM01000081.1 = NZ_LRMM01000081.1 Primary Assembly 19106 na contig_82 unplaced-scaffold na na LRMM01000082.1 = NZ_LRMM01000082.1 Primary Assembly 18609 na contig_83 unplaced-scaffold na na LRMM01000083.1 = NZ_LRMM01000083.1 Primary Assembly 18427 na contig_84 unplaced-scaffold na na LRMM01000084.1 = NZ_LRMM01000084.1 Primary Assembly 17963 na contig_85 unplaced-scaffold na na LRMM01000085.1 = NZ_LRMM01000085.1 Primary Assembly 17752 na contig_86 unplaced-scaffold na na LRMM01000086.1 = NZ_LRMM01000086.1 Primary Assembly 16748 na contig_87 unplaced-scaffold na na LRMM01000087.1 = NZ_LRMM01000087.1 Primary Assembly 16396 na contig_88 unplaced-scaffold na na LRMM01000088.1 = NZ_LRMM01000088.1 Primary Assembly 16347 na contig_89 unplaced-scaffold na na LRMM01000089.1 = NZ_LRMM01000089.1 Primary Assembly 16279 na contig_90 unplaced-scaffold na na LRMM01000090.1 = NZ_LRMM01000090.1 Primary Assembly 14872 na contig_91 unplaced-scaffold na na LRMM01000091.1 = NZ_LRMM01000091.1 Primary Assembly 14723 na contig_92 unplaced-scaffold na na LRMM01000092.1 = NZ_LRMM01000092.1 Primary Assembly 14548 na contig_93 unplaced-scaffold na na LRMM01000093.1 = NZ_LRMM01000093.1 Primary Assembly 13551 na contig_94 unplaced-scaffold na na LRMM01000094.1 = NZ_LRMM01000094.1 Primary Assembly 13499 na contig_95 unplaced-scaffold na na LRMM01000095.1 = NZ_LRMM01000095.1 Primary Assembly 13456 na contig_96 unplaced-scaffold na na LRMM01000096.1 = NZ_LRMM01000096.1 Primary Assembly 12943 na contig_97 unplaced-scaffold na na LRMM01000097.1 = NZ_LRMM01000097.1 Primary Assembly 12794 na contig_98 unplaced-scaffold na na LRMM01000098.1 = NZ_LRMM01000098.1 Primary Assembly 12715 na contig_99 unplaced-scaffold na na LRMM01000099.1 = NZ_LRMM01000099.1 Primary Assembly 12677 na contig_100 unplaced-scaffold na na LRMM01000100.1 = NZ_LRMM01000100.1 Primary Assembly 12668 na contig_101 unplaced-scaffold na na LRMM01000101.1 = NZ_LRMM01000101.1 Primary Assembly 12247 na contig_102 unplaced-scaffold na na LRMM01000102.1 = NZ_LRMM01000102.1 Primary Assembly 11199 na contig_103 unplaced-scaffold na na LRMM01000103.1 = NZ_LRMM01000103.1 Primary Assembly 11009 na contig_104 unplaced-scaffold na na LRMM01000104.1 = NZ_LRMM01000104.1 Primary Assembly 10456 na contig_105 unplaced-scaffold na na LRMM01000105.1 = NZ_LRMM01000105.1 Primary Assembly 10454 na contig_106 unplaced-scaffold na na LRMM01000106.1 = NZ_LRMM01000106.1 Primary Assembly 10377 na contig_107 unplaced-scaffold na na LRMM01000107.1 = NZ_LRMM01000107.1 Primary Assembly 9267 na contig_108 unplaced-scaffold na na LRMM01000108.1 = NZ_LRMM01000108.1 Primary Assembly 9179 na contig_109 unplaced-scaffold na na LRMM01000109.1 = NZ_LRMM01000109.1 Primary Assembly 9050 na contig_110 unplaced-scaffold na na LRMM01000110.1 = NZ_LRMM01000110.1 Primary Assembly 9012 na contig_111 unplaced-scaffold na na LRMM01000111.1 = NZ_LRMM01000111.1 Primary Assembly 8692 na contig_112 unplaced-scaffold na na LRMM01000112.1 = NZ_LRMM01000112.1 Primary Assembly 8303 na contig_113 unplaced-scaffold na na LRMM01000113.1 = NZ_LRMM01000113.1 Primary Assembly 8230 na contig_114 unplaced-scaffold na na LRMM01000114.1 = NZ_LRMM01000114.1 Primary Assembly 8214 na contig_115 unplaced-scaffold na na LRMM01000115.1 = NZ_LRMM01000115.1 Primary Assembly 7988 na contig_116 unplaced-scaffold na na LRMM01000116.1 = NZ_LRMM01000116.1 Primary Assembly 7642 na contig_117 unplaced-scaffold na na LRMM01000117.1 = NZ_LRMM01000117.1 Primary Assembly 6827 na contig_118 unplaced-scaffold na na LRMM01000118.1 = NZ_LRMM01000118.1 Primary Assembly 6632 na contig_119 unplaced-scaffold na na LRMM01000119.1 = NZ_LRMM01000119.1 Primary Assembly 6601 na contig_120 unplaced-scaffold na na LRMM01000120.1 = NZ_LRMM01000120.1 Primary Assembly 6579 na contig_121 unplaced-scaffold na na LRMM01000121.1 = NZ_LRMM01000121.1 Primary Assembly 6500 na contig_122 unplaced-scaffold na na LRMM01000122.1 = NZ_LRMM01000122.1 Primary Assembly 6279 na contig_123 unplaced-scaffold na na LRMM01000123.1 = NZ_LRMM01000123.1 Primary Assembly 6184 na contig_124 unplaced-scaffold na na LRMM01000124.1 = NZ_LRMM01000124.1 Primary Assembly 6048 na contig_125 unplaced-scaffold na na LRMM01000125.1 = NZ_LRMM01000125.1 Primary Assembly 6039 na contig_126 unplaced-scaffold na na LRMM01000126.1 = NZ_LRMM01000126.1 Primary Assembly 5919 na contig_127 unplaced-scaffold na na LRMM01000127.1 = NZ_LRMM01000127.1 Primary Assembly 5658 na contig_128 unplaced-scaffold na na LRMM01000128.1 = NZ_LRMM01000128.1 Primary Assembly 5609 na contig_129 unplaced-scaffold na na LRMM01000129.1 = NZ_LRMM01000129.1 Primary Assembly 5365 na contig_130 unplaced-scaffold na na LRMM01000130.1 = NZ_LRMM01000130.1 Primary Assembly 5288 na contig_131 unplaced-scaffold na na LRMM01000131.1 = NZ_LRMM01000131.1 Primary Assembly 4904 na contig_132 unplaced-scaffold na na LRMM01000132.1 = NZ_LRMM01000132.1 Primary Assembly 4610 na contig_133 unplaced-scaffold na na LRMM01000133.1 = NZ_LRMM01000133.1 Primary Assembly 4476 na contig_134 unplaced-scaffold na na LRMM01000134.1 = NZ_LRMM01000134.1 Primary Assembly 4278 na contig_135 unplaced-scaffold na na LRMM01000135.1 = NZ_LRMM01000135.1 Primary Assembly 3916 na contig_136 unplaced-scaffold na na LRMM01000136.1 = NZ_LRMM01000136.1 Primary Assembly 3727 na contig_137 unplaced-scaffold na na LRMM01000137.1 = NZ_LRMM01000137.1 Primary Assembly 3681 na contig_138 unplaced-scaffold na na LRMM01000138.1 = NZ_LRMM01000138.1 Primary Assembly 3521 na contig_139 unplaced-scaffold na na LRMM01000139.1 = NZ_LRMM01000139.1 Primary Assembly 3518 na contig_140 unplaced-scaffold na na LRMM01000140.1 = NZ_LRMM01000140.1 Primary Assembly 3322 na contig_141 unplaced-scaffold na na LRMM01000141.1 = NZ_LRMM01000141.1 Primary Assembly 3307 na contig_142 unplaced-scaffold na na LRMM01000142.1 = NZ_LRMM01000142.1 Primary Assembly 3298 na contig_143 unplaced-scaffold na na LRMM01000143.1 = NZ_LRMM01000143.1 Primary Assembly 2564 na contig_144 unplaced-scaffold na na LRMM01000144.1 = NZ_LRMM01000144.1 Primary Assembly 2305 na contig_147 unplaced-scaffold na na LRMM01000145.1 = NZ_LRMM01000145.1 Primary Assembly 1986 na contig_149 unplaced-scaffold na na LRMM01000146.1 = NZ_LRMM01000146.1 Primary Assembly 1913 na contig_150 unplaced-scaffold na na LRMM01000147.1 = NZ_LRMM01000147.1 Primary Assembly 1862 na contig_151 unplaced-scaffold na na LRMM01000148.1 = NZ_LRMM01000148.1 Primary Assembly 1713 na contig_152 unplaced-scaffold na na LRMM01000149.1 = NZ_LRMM01000149.1 Primary Assembly 1624 na contig_153 unplaced-scaffold na na LRMM01000150.1 = NZ_LRMM01000150.1 Primary Assembly 1618 na contig_154 unplaced-scaffold na na LRMM01000151.1 = NZ_LRMM01000151.1 Primary Assembly 1547 na contig_155 unplaced-scaffold na na LRMM01000152.1 = NZ_LRMM01000152.1 Primary Assembly 1518 na contig_157 unplaced-scaffold na na LRMM01000153.1 = NZ_LRMM01000153.1 Primary Assembly 1413 na contig_159 unplaced-scaffold na na LRMM01000154.1 = NZ_LRMM01000154.1 Primary Assembly 1274 na contig_160 unplaced-scaffold na na LRMM01000155.1 = NZ_LRMM01000155.1 Primary Assembly 1228 na contig_162 unplaced-scaffold na na LRMM01000156.1 = NZ_LRMM01000156.1 Primary Assembly 1183 na contig_166 unplaced-scaffold na na LRMM01000157.1 = NZ_LRMM01000157.1 Primary Assembly 1006 na contig_168 unplaced-scaffold na na LRMM01000158.1 = NZ_LRMM01000158.1 Primary Assembly 981 na contig_172 unplaced-scaffold na na LRMM01000159.1 = NZ_LRMM01000159.1 Primary Assembly 940 na contig_173 unplaced-scaffold na na LRMM01000160.1 = NZ_LRMM01000160.1 Primary Assembly 920 na contig_174 unplaced-scaffold na na LRMM01000161.1 = NZ_LRMM01000161.1 Primary Assembly 907 na contig_175 unplaced-scaffold na na LRMM01000162.1 = NZ_LRMM01000162.1 Primary Assembly 852 na contig_176 unplaced-scaffold na na LRMM01000163.1 = NZ_LRMM01000163.1 Primary Assembly 819 na contig_177 unplaced-scaffold na na LRMM01000164.1 = NZ_LRMM01000164.1 Primary Assembly 573 na contig_259 unplaced-scaffold na na LRMM01000165.1 = NZ_LRMM01000165.1 Primary Assembly 409 na contig_385 unplaced-scaffold na na LRMM01000166.1 = NZ_LRMM01000166.1 Primary Assembly 258 na