# Assembly name: M.esculenta_v8 # Organism name: Manihot esculenta (cassava) # Infraspecific name: cultivar=AM560-2 # Taxid: 3983 # BioSample: SAMN04116956 # BioProject: PRJNA234389 # Submitter: DOE-Joint Genome Institute # Date: 2021-08-13 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: LTYI02 # Assembly method: Canu v. 1.6 # Genome coverage: 97x # Sequencing technology: PacBio RSII; Sequel # RefSeq category: Representative Genome # GenBank assembly accession: GCA_001659605.2 # RefSeq assembly accession: GCF_001659605.2 # RefSeq assembly and GenBank assemblies identical: no # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_001659615.2 GCF_001659615.2 Primary Assembly ## GCF_000095235.2 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Chromosome01 assembled-molecule 1 Chromosome CM004387.2 = NC_035161.2 Primary Assembly 42998274 na Chromosome02 assembled-molecule 2 Chromosome CM004388.2 = NC_035162.2 Primary Assembly 38567855 na Chromosome03 assembled-molecule 3 Chromosome CM004389.2 = NC_035163.2 Primary Assembly 33309257 na Chromosome04 assembled-molecule 4 Chromosome CM004390.2 = NC_035164.2 Primary Assembly 35938211 na Chromosome05 assembled-molecule 5 Chromosome CM004391.2 = NC_035165.2 Primary Assembly 33681570 na Chromosome06 assembled-molecule 6 Chromosome CM004392.2 = NC_035166.2 Primary Assembly 30819343 na Chromosome07 assembled-molecule 7 Chromosome CM004393.2 = NC_035167.2 Primary Assembly 34668054 na Chromosome08 assembled-molecule 8 Chromosome CM004394.2 = NC_035168.2 Primary Assembly 41806886 na Chromosome09 assembled-molecule 9 Chromosome CM004395.2 = NC_035169.2 Primary Assembly 37838006 na Chromosome10 assembled-molecule 10 Chromosome CM004396.2 = NC_035170.2 Primary Assembly 32070051 na Chromosome11 assembled-molecule 11 Chromosome CM004397.2 = NC_035171.2 Primary Assembly 33098381 na Chromosome12 assembled-molecule 12 Chromosome CM004398.2 = NC_035172.2 Primary Assembly 37136911 na Chromosome13 assembled-molecule 13 Chromosome CM004399.2 = NC_035173.2 Primary Assembly 36952686 na Chromosome14 assembled-molecule 14 Chromosome CM004400.2 = NC_035174.2 Primary Assembly 29308386 na Chromosome15 assembled-molecule 15 Chromosome CM004401.2 = NC_035175.2 Primary Assembly 32923186 na Chromosome16 assembled-molecule 16 Chromosome CM004402.2 = NC_035176.2 Primary Assembly 34171075 na Chromosome17 assembled-molecule 17 Chromosome CM004403.2 = NC_035177.2 Primary Assembly 35156893 na Chromosome18 assembled-molecule 18 Chromosome CM004404.2 = NC_035178.2 Primary Assembly 33477107 na Scaffold01 unplaced-scaffold na na MU251160.1 = NW_025215418.1 Primary Assembly 13419 na Scaffold02 unplaced-scaffold na na MU251161.1 = NW_025215419.1 Primary Assembly 21021 na Scaffold03 unplaced-scaffold na na MU251162.1 = NW_025215420.1 Primary Assembly 27000 na Scaffold04 unplaced-scaffold na na MU251163.1 = NW_025215421.1 Primary Assembly 14010 na Scaffold05 unplaced-scaffold na na MU251164.1 = NW_025215422.1 Primary Assembly 36956 na Scaffold06 unplaced-scaffold na na MU251165.1 = NW_025215423.1 Primary Assembly 17546 na Scaffold07 unplaced-scaffold na na MU251166.1 = NW_025215424.1 Primary Assembly 20386 na Scaffold08 unplaced-scaffold na na MU251167.1 = NW_025215425.1 Primary Assembly 50365 na Scaffold09 unplaced-scaffold na na MU251168.1 = NW_025215426.1 Primary Assembly 47296 na Scaffold10 unplaced-scaffold na na MU251169.1 = NW_025215427.1 Primary Assembly 31674 na Scaffold11 unplaced-scaffold na na MU251170.1 = NW_025215428.1 Primary Assembly 40826 na Scaffold12 unplaced-scaffold na na MU251171.1 = NW_025215429.1 Primary Assembly 25847 na Scaffold13 unplaced-scaffold na na MU251172.1 = NW_025215430.1 Primary Assembly 27209 na Scaffold14 unplaced-scaffold na na MU251173.1 = NW_025215431.1 Primary Assembly 33294 na Scaffold15 unplaced-scaffold na na MU251174.1 = NW_025215432.1 Primary Assembly 15292 na Scaffold16 unplaced-scaffold na na MU251175.1 = NW_025215433.1 Primary Assembly 35079 na Scaffold17 unplaced-scaffold na na MU251176.1 = NW_025215434.1 Primary Assembly 62073 na Scaffold18 unplaced-scaffold na na MU251177.1 = NW_025215435.1 Primary Assembly 42474 na Scaffold19 unplaced-scaffold na na MU251178.1 = NW_025215436.1 Primary Assembly 28472 na Scaffold20 unplaced-scaffold na na MU251179.1 = NW_025215437.1 Primary Assembly 26961 na Scaffold21 unplaced-scaffold na na MU251180.1 = NW_025215438.1 Primary Assembly 23972 na Scaffold22 unplaced-scaffold na na MU251181.1 = NW_025215439.1 Primary Assembly 23530 na Scaffold23 unplaced-scaffold na na MU251182.1 = NW_025215440.1 Primary Assembly 23098 na Scaffold24 unplaced-scaffold na na MU251183.1 = NW_025215441.1 Primary Assembly 22353 na Scaffold25 unplaced-scaffold na na MU251184.1 = NW_025215442.1 Primary Assembly 21960 na Scaffold26 unplaced-scaffold na na MU251185.1 = NW_025215443.1 Primary Assembly 19738 na Scaffold27 unplaced-scaffold na na MU251186.1 = NW_025215444.1 Primary Assembly 19215 na Scaffold28 unplaced-scaffold na na MU251187.1 = NW_025215445.1 Primary Assembly 19088 na Scaffold29 unplaced-scaffold na na MU251188.1 = NW_025215446.1 Primary Assembly 16879 na Scaffold30 unplaced-scaffold na na MU251189.1 = NW_025215447.1 Primary Assembly 16865 na Scaffold31 unplaced-scaffold na na MU251190.1 = NW_025215448.1 Primary Assembly 16364 na Scaffold32 unplaced-scaffold na na MU251191.1 = NW_025215449.1 Primary Assembly 16295 na Scaffold33 unplaced-scaffold na na MU251192.1 = NW_025215450.1 Primary Assembly 16210 na Scaffold34 unplaced-scaffold na na MU251193.1 = NW_025215451.1 Primary Assembly 15842 na Scaffold35 unplaced-scaffold na na MU251194.1 = NW_025215452.1 Primary Assembly 15113 na Scaffold36 unplaced-scaffold na na MU251195.1 = NW_025215453.1 Primary Assembly 15098 na Scaffold37 unplaced-scaffold na na MU251196.1 = NW_025215454.1 Primary Assembly 14573 na Scaffold38 unplaced-scaffold na na MU251197.1 = NW_025215455.1 Primary Assembly 14482 na Scaffold39 unplaced-scaffold na na MU251198.1 = NW_025215456.1 Primary Assembly 14451 na Scaffold40 unplaced-scaffold na na MU251199.1 = NW_025215457.1 Primary Assembly 14330 na Scaffold41 unplaced-scaffold na na MU251200.1 = NW_025215458.1 Primary Assembly 13007 na Scaffold42 unplaced-scaffold na na MU251201.1 = NW_025215459.1 Primary Assembly 12959 na Scaffold43 unplaced-scaffold na na MU251202.1 = NW_025215460.1 Primary Assembly 12312 na Scaffold44 unplaced-scaffold na na MU251203.1 = NW_025215461.1 Primary Assembly 12288 na Scaffold45 unplaced-scaffold na na MU251204.1 = NW_025215462.1 Primary Assembly 12325 na Scaffold46 unplaced-scaffold na na MU251205.1 = NW_025215463.1 Primary Assembly 12186 na Scaffold47 unplaced-scaffold na na MU251206.1 = NW_025215464.1 Primary Assembly 12468 na Scaffold48 unplaced-scaffold na na MU251207.1 = NW_025215465.1 Primary Assembly 10794 na Scaffold49 unplaced-scaffold na na MU251208.1 = NW_025215466.1 Primary Assembly 10649 na Scaffold50 unplaced-scaffold na na MU251209.1 = NW_025215467.1 Primary Assembly 10655 na Scaffold51 unplaced-scaffold na na MU251210.1 = NW_025215468.1 Primary Assembly 35982 na Scaffold52 unplaced-scaffold na na MU251211.1 = NW_025215469.1 Primary Assembly 34541 na Scaffold53 unplaced-scaffold na na MU251212.1 = NW_025215470.1 Primary Assembly 35717 na Scaffold54 unplaced-scaffold na na MU251213.1 = NW_025215471.1 Primary Assembly 32908 na Scaffold55 unplaced-scaffold na na MU251214.1 = NW_025215472.1 Primary Assembly 24440 na Scaffold56 unplaced-scaffold na na MU251215.1 = NW_025215473.1 Primary Assembly 24198 na Scaffold57 unplaced-scaffold na na MU251216.1 = NW_025215474.1 Primary Assembly 21552 na Scaffold58 unplaced-scaffold na na MU251217.1 = NW_025215475.1 Primary Assembly 19228 na Scaffold59 unplaced-scaffold na na MU251218.1 = NW_025215476.1 Primary Assembly 15822 na Scaffold60 unplaced-scaffold na na MU251219.1 = NW_025215477.1 Primary Assembly 14719 na Scaffold61 unplaced-scaffold na na MU251220.1 = NW_025215478.1 Primary Assembly 12934 na Scaffold62 unplaced-scaffold na na MU251221.1 = NW_025215479.1 Primary Assembly 12895 na Scaffold63 unplaced-scaffold na na MU251222.1 = NW_025215480.1 Primary Assembly 10897 na Scaffold64 unplaced-scaffold na na MU251223.1 = NW_025215481.1 Primary Assembly 2485645 na Scaffold65 unplaced-scaffold na na MU251224.1 = NW_025215482.1 Primary Assembly 1034286 na Scaffold66 unplaced-scaffold na na MU251225.1 = NW_025215483.1 Primary Assembly 752505 na MT assembled-molecule MT Mitochondrion na <> NC_045136.1 non-nuclear 682840 na Pltd assembled-molecule Pltd Chloroplast na <> NC_010433.1 non-nuclear 161453 na