# Assembly name: ASM166337v1 # Organism name: Caldivirga sp. MU80 (crenarchaeotes) # Infraspecific name: strain=MU80 # Taxid: 1650354 # BioSample: SAMN03580834 # BioProject: PRJNA282926 # Submitter: University of Cincinnati # Date: 2016-06-15 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: LCTF01 # Assembly method: Velvet v. 1.2.3 # Expected final version: yes # Genome coverage: 20.0x # Sequencing technology: Illumina MiSeq # GenBank assembly accession: GCA_001663375.1 # RefSeq assembly accession: GCF_001663375.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_001663385.1 GCF_001663385.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name contig_1 unplaced-scaffold na na LCTF01000001.1 = NZ_LCTF01000001.1 Primary Assembly 108925 na contig_100 unplaced-scaffold na na LCTF01000038.1 = NZ_LCTF01000038.1 Primary Assembly 25611 na contig_101 unplaced-scaffold na na LCTF01000039.1 = NZ_LCTF01000039.1 Primary Assembly 25528 na contig_1013 unplaced-scaffold na na LCTF01000066.1 = NZ_LCTF01000066.1 Primary Assembly 1524 na contig_1037 unplaced-scaffold na na LCTF01000067.1 = NZ_LCTF01000067.1 Primary Assembly 1505 na contig_1057 unplaced-scaffold na na LCTF01000068.1 = NZ_LCTF01000068.1 Primary Assembly 1481 na contig_1070 unplaced-scaffold na na LCTF01000069.1 = NZ_LCTF01000069.1 Primary Assembly 1461 na contig_1100 unplaced-scaffold na na LCTF01000070.1 = NZ_LCTF01000070.1 Primary Assembly 1424 na contig_115 unplaced-scaffold na na LCTF01000040.1 = NZ_LCTF01000040.1 Primary Assembly 22265 na contig_1268 unplaced-scaffold na na LCTF01000071.1 = NZ_LCTF01000071.1 Primary Assembly 1175 na contig_131 unplaced-scaffold na na LCTF01000041.1 = NZ_LCTF01000041.1 Primary Assembly 20051 na contig_1324 unplaced-scaffold na na LCTF01000073.1 = NZ_LCTF01000073.1 Primary Assembly 1112 na contig_1325 unplaced-scaffold na na LCTF01000072.1 = NZ_LCTF01000072.1 Primary Assembly 1112 na contig_1454 unplaced-scaffold na na LCTF01000074.1 = NZ_LCTF01000074.1 Primary Assembly 979 na contig_146 unplaced-scaffold na na LCTF01000042.1 = NZ_LCTF01000042.1 Primary Assembly 17207 na contig_15 unplaced-scaffold na na LCTF01000008.1 = NZ_LCTF01000008.1 Primary Assembly 67041 na contig_155 unplaced-scaffold na na LCTF01000043.1 = NZ_LCTF01000043.1 Primary Assembly 15873 na contig_16 unplaced-scaffold na na LCTF01000009.1 = NZ_LCTF01000009.1 Primary Assembly 66771 na contig_161 unplaced-scaffold na na LCTF01000044.1 = NZ_LCTF01000044.1 Primary Assembly 15410 na contig_162 unplaced-scaffold na na LCTF01000045.1 = NZ_LCTF01000045.1 Primary Assembly 15286 na contig_165 unplaced-scaffold na na LCTF01000046.1 = NZ_LCTF01000046.1 Primary Assembly 15015 na contig_180 unplaced-scaffold na na LCTF01000047.1 = NZ_LCTF01000047.1 Primary Assembly 13364 na contig_1851 unplaced-scaffold na na LCTF01000075.1 = NZ_LCTF01000075.1 Primary Assembly 735 na contig_1978 unplaced-scaffold na na LCTF01000076.1 = NZ_LCTF01000076.1 Primary Assembly 690 na contig_2 unplaced-scaffold na na LCTF01000002.1 = NZ_LCTF01000002.1 Primary Assembly 104924 na contig_20 unplaced-scaffold na na LCTF01000010.1 = NZ_LCTF01000010.1 Primary Assembly 61188 na contig_202 unplaced-scaffold na na LCTF01000048.1 = NZ_LCTF01000048.1 Primary Assembly 11051 na contig_221 unplaced-scaffold na na LCTF01000049.1 = NZ_LCTF01000049.1 Primary Assembly 9759 na contig_227 unplaced-scaffold na na LCTF01000050.1 = NZ_LCTF01000050.1 Primary Assembly 9435 na contig_23 unplaced-scaffold na na LCTF01000011.1 = NZ_LCTF01000011.1 Primary Assembly 57552 na contig_249 unplaced-scaffold na na LCTF01000051.1 = NZ_LCTF01000051.1 Primary Assembly 8585 na contig_251 unplaced-scaffold na na LCTF01000052.1 = NZ_LCTF01000052.1 Primary Assembly 8507 na contig_252 unplaced-scaffold na na LCTF01000053.1 = NZ_LCTF01000053.1 Primary Assembly 8398 na contig_258 unplaced-scaffold na na LCTF01000054.1 = NZ_LCTF01000054.1 Primary Assembly 8119 na contig_26 unplaced-scaffold na na LCTF01000012.1 = NZ_LCTF01000012.1 Primary Assembly 56457 na contig_2763 unplaced-scaffold na na LCTF01000077.1 = NZ_LCTF01000077.1 Primary Assembly 518 na contig_29 unplaced-scaffold na na LCTF01000013.1 = NZ_LCTF01000013.1 Primary Assembly 53902 na contig_2934 unplaced-scaffold na na LCTF01000078.1 = NZ_LCTF01000078.1 Primary Assembly 491 na contig_3060 unplaced-scaffold na na LCTF01000079.1 = NZ_LCTF01000079.1 Primary Assembly 475 na contig_307 unplaced-scaffold na na LCTF01000055.1 = NZ_LCTF01000055.1 Primary Assembly 5955 na contig_32 unplaced-scaffold na na LCTF01000014.1 = NZ_LCTF01000014.1 Primary Assembly 52925 na contig_320 unplaced-scaffold na na LCTF01000056.1 = NZ_LCTF01000056.1 Primary Assembly 5528 na contig_338 unplaced-scaffold na na LCTF01000057.1 = NZ_LCTF01000057.1 Primary Assembly 5003 na contig_35 unplaced-scaffold na na LCTF01000015.1 = NZ_LCTF01000015.1 Primary Assembly 49445 na contig_37 unplaced-scaffold na na LCTF01000016.1 = NZ_LCTF01000016.1 Primary Assembly 48673 na contig_372 unplaced-scaffold na na LCTF01000058.1 = NZ_LCTF01000058.1 Primary Assembly 4370 na contig_384 unplaced-scaffold na na LCTF01000059.1 = NZ_LCTF01000059.1 Primary Assembly 4221 na contig_39 unplaced-scaffold na na LCTF01000017.1 = NZ_LCTF01000017.1 Primary Assembly 47172 na contig_4 unplaced-scaffold na na LCTF01000003.1 = NZ_LCTF01000003.1 Primary Assembly 95549 na contig_40 unplaced-scaffold na na LCTF01000018.1 = NZ_LCTF01000018.1 Primary Assembly 47035 na contig_41 unplaced-scaffold na na LCTF01000019.1 = NZ_LCTF01000019.1 Primary Assembly 46486 na contig_4110 unplaced-scaffold na na LCTF01000080.1 = NZ_LCTF01000080.1 Primary Assembly 424 na contig_4237 unplaced-scaffold na na LCTF01000081.1 = NZ_LCTF01000081.1 Primary Assembly 419 na contig_43 unplaced-scaffold na na LCTF01000020.1 = NZ_LCTF01000020.1 Primary Assembly 45304 na contig_434 unplaced-scaffold na na LCTF01000060.1 = NZ_LCTF01000060.1 Primary Assembly 3649 na contig_449 unplaced-scaffold na na LCTF01000061.1 = NZ_LCTF01000061.1 Primary Assembly 3459 na contig_4495 unplaced-scaffold na na LCTF01000082.1 = NZ_LCTF01000082.1 Primary Assembly 409 na contig_456 unplaced-scaffold na na LCTF01000062.1 = NZ_LCTF01000062.1 Primary Assembly 3375 na contig_459 unplaced-scaffold na na LCTF01000063.1 = NZ_LCTF01000063.1 Primary Assembly 3356 na contig_46 unplaced-scaffold na na LCTF01000021.1 = NZ_LCTF01000021.1 Primary Assembly 44829 na contig_48 unplaced-scaffold na na LCTF01000022.1 = NZ_LCTF01000022.1 Primary Assembly 42504 na contig_49 unplaced-scaffold na na LCTF01000023.1 = NZ_LCTF01000023.1 Primary Assembly 41549 na contig_5 unplaced-scaffold na na LCTF01000004.1 = NZ_LCTF01000004.1 Primary Assembly 92349 na contig_5027 unplaced-scaffold na na LCTF01000083.1 = NZ_LCTF01000083.1 Primary Assembly 392 na contig_52 unplaced-scaffold na na LCTF01000024.1 = NZ_LCTF01000024.1 Primary Assembly 41065 na contig_54 unplaced-scaffold na na LCTF01000025.1 = NZ_LCTF01000025.1 Primary Assembly 39675 na contig_5457 unplaced-scaffold na na LCTF01000084.1 = NZ_LCTF01000084.1 Primary Assembly 379 na contig_56 unplaced-scaffold na na LCTF01000026.1 = NZ_LCTF01000026.1 Primary Assembly 39077 na contig_5602 unplaced-scaffold na na LCTF01000085.1 = NZ_LCTF01000085.1 Primary Assembly 335 na contig_5603 unplaced-scaffold na na LCTF01000086.1 = NZ_LCTF01000086.1 Primary Assembly 334 na contig_6 unplaced-scaffold na na LCTF01000005.1 = NZ_LCTF01000005.1 Primary Assembly 90474 na contig_65 unplaced-scaffold na na LCTF01000027.1 = NZ_LCTF01000027.1 Primary Assembly 35690 na contig_7 unplaced-scaffold na na LCTF01000006.1 = NZ_LCTF01000006.1 Primary Assembly 88373 na contig_71 unplaced-scaffold na na LCTF01000028.1 = NZ_LCTF01000028.1 Primary Assembly 33905 na contig_716 unplaced-scaffold na na LCTF01000064.1 = NZ_LCTF01000064.1 Primary Assembly 2134 na contig_76 unplaced-scaffold na na LCTF01000029.1 = NZ_LCTF01000029.1 Primary Assembly 31881 na contig_78 unplaced-scaffold na na LCTF01000030.1 = NZ_LCTF01000030.1 Primary Assembly 31013 na contig_79 unplaced-scaffold na na LCTF01000031.1 = NZ_LCTF01000031.1 Primary Assembly 30546 na contig_81 unplaced-scaffold na na LCTF01000032.1 = NZ_LCTF01000032.1 Primary Assembly 30003 na contig_84 unplaced-scaffold na na LCTF01000033.1 = NZ_LCTF01000033.1 Primary Assembly 29435 na contig_85 unplaced-scaffold na na LCTF01000034.1 = NZ_LCTF01000034.1 Primary Assembly 29341 na contig_87 unplaced-scaffold na na LCTF01000035.1 = NZ_LCTF01000035.1 Primary Assembly 28988 na contig_9 unplaced-scaffold na na LCTF01000007.1 = NZ_LCTF01000007.1 Primary Assembly 85532 na contig_90 unplaced-scaffold na na LCTF01000036.1 = NZ_LCTF01000036.1 Primary Assembly 28434 na contig_901 unplaced-scaffold na na LCTF01000065.1 = NZ_LCTF01000065.1 Primary Assembly 1698 na contig_94 unplaced-scaffold na na LCTF01000037.1 = NZ_LCTF01000037.1 Primary Assembly 26873 na