# Assembly name: ASM175878v1 # Organism name: Duganella phyllosphaerae (b-proteobacteria) # Infraspecific name: strain=T54 # Taxid: 762836 # BioSample: SAMN04320696 # BioProject: PRJNA309031 # Submitter: Goettingen Genomics Laboratory # Date: 2016-10-11 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: LROM01 # Assembly method: SPAdes v. 3.5 # Expected final version: yes # Genome coverage: 89.6x # Sequencing technology: Illumina # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_001758785.1 # RefSeq assembly accession: GCF_001758785.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_001758805.1 GCF_001758805.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name DUPY_contig000001 unplaced-scaffold na na LROM01000001.1 = NZ_LROM01000001.1 Primary Assembly 506 na DUPY_contig000002 unplaced-scaffold na na LROM01000002.1 = NZ_LROM01000002.1 Primary Assembly 81544 na DUPY_contig000003 unplaced-scaffold na na LROM01000003.1 = NZ_LROM01000003.1 Primary Assembly 847 na DUPY_contig000004 unplaced-scaffold na na LROM01000004.1 = NZ_LROM01000004.1 Primary Assembly 903 na DUPY_contig000005 unplaced-scaffold na na LROM01000005.1 = NZ_LROM01000005.1 Primary Assembly 1197 na DUPY_contig000006 unplaced-scaffold na na LROM01000006.1 = NZ_LROM01000006.1 Primary Assembly 4222 na DUPY_contig000007 unplaced-scaffold na na LROM01000007.1 = NZ_LROM01000007.1 Primary Assembly 33879 na DUPY_contig000008 unplaced-scaffold na na LROM01000008.1 = NZ_LROM01000008.1 Primary Assembly 1758 na DUPY_contig000009 unplaced-scaffold na na LROM01000009.1 = NZ_LROM01000009.1 Primary Assembly 1771 na DUPY_contig000010 unplaced-scaffold na na LROM01000010.1 = NZ_LROM01000010.1 Primary Assembly 2110 na DUPY_contig000011 unplaced-scaffold na na LROM01000011.1 = NZ_LROM01000011.1 Primary Assembly 2274 na DUPY_contig000012 unplaced-scaffold na na LROM01000012.1 = NZ_LROM01000012.1 Primary Assembly 2674 na DUPY_contig000013 unplaced-scaffold na na LROM01000013.1 = NZ_LROM01000013.1 Primary Assembly 18075 na DUPY_contig000014 unplaced-scaffold na na LROM01000014.1 = NZ_LROM01000014.1 Primary Assembly 11330 na DUPY_contig000015 unplaced-scaffold na na LROM01000015.1 = NZ_LROM01000015.1 Primary Assembly 4532 na DUPY_contig000016 unplaced-scaffold na na LROM01000016.1 = NZ_LROM01000016.1 Primary Assembly 51678 na DUPY_contig000017 unplaced-scaffold na na LROM01000017.1 = NZ_LROM01000017.1 Primary Assembly 23072 na DUPY_contig000018 unplaced-scaffold na na LROM01000018.1 = NZ_LROM01000018.1 Primary Assembly 537 na DUPY_contig000019 unplaced-scaffold na na LROM01000019.1 = NZ_LROM01000019.1 Primary Assembly 5082 na DUPY_contig000020 unplaced-scaffold na na LROM01000020.1 = NZ_LROM01000020.1 Primary Assembly 5130 na DUPY_contig000021 unplaced-scaffold na na LROM01000021.1 = NZ_LROM01000021.1 Primary Assembly 5892 na DUPY_contig000022 unplaced-scaffold na na LROM01000022.1 = NZ_LROM01000022.1 Primary Assembly 3271 na DUPY_contig000023 unplaced-scaffold na na LROM01000023.1 = NZ_LROM01000023.1 Primary Assembly 6931 na DUPY_contig000024 unplaced-scaffold na na LROM01000024.1 = NZ_LROM01000024.1 Primary Assembly 56109 na DUPY_contig000025 unplaced-scaffold na na LROM01000025.1 = NZ_LROM01000025.1 Primary Assembly 71566 na DUPY_contig000026 unplaced-scaffold na na LROM01000026.1 = NZ_LROM01000026.1 Primary Assembly 7938 na DUPY_contig000027 unplaced-scaffold na na LROM01000027.1 = NZ_LROM01000027.1 Primary Assembly 8071 na DUPY_contig000028 unplaced-scaffold na na LROM01000028.1 = NZ_LROM01000028.1 Primary Assembly 8445 na DUPY_contig000029 unplaced-scaffold na na LROM01000029.1 = NZ_LROM01000029.1 Primary Assembly 18258 na DUPY_contig000030 unplaced-scaffold na na LROM01000030.1 = NZ_LROM01000030.1 Primary Assembly 8891 na DUPY_contig000031 unplaced-scaffold na na LROM01000031.1 = NZ_LROM01000031.1 Primary Assembly 30070 na DUPY_contig000032 unplaced-scaffold na na LROM01000032.1 = NZ_LROM01000032.1 Primary Assembly 10729 na DUPY_contig000033 unplaced-scaffold na na LROM01000033.1 = NZ_LROM01000033.1 Primary Assembly 10381 na DUPY_contig000034 unplaced-scaffold na na LROM01000034.1 = NZ_LROM01000034.1 Primary Assembly 10597 na DUPY_contig000035 unplaced-scaffold na na LROM01000035.1 = NZ_LROM01000035.1 Primary Assembly 10911 na DUPY_contig000036 unplaced-scaffold na na LROM01000036.1 = NZ_LROM01000036.1 Primary Assembly 17882 na DUPY_contig000037 unplaced-scaffold na na LROM01000037.1 = NZ_LROM01000037.1 Primary Assembly 11510 na DUPY_contig000038 unplaced-scaffold na na LROM01000038.1 = NZ_LROM01000038.1 Primary Assembly 11966 na DUPY_contig000039 unplaced-scaffold na na LROM01000039.1 = NZ_LROM01000039.1 Primary Assembly 12320 na DUPY_contig000040 unplaced-scaffold na na LROM01000040.1 = NZ_LROM01000040.1 Primary Assembly 46523 na DUPY_contig000041 unplaced-scaffold na na LROM01000041.1 = NZ_LROM01000041.1 Primary Assembly 1742 na DUPY_contig000042 unplaced-scaffold na na LROM01000042.1 = NZ_LROM01000042.1 Primary Assembly 8558 na DUPY_contig000043 unplaced-scaffold na na LROM01000043.1 = NZ_LROM01000043.1 Primary Assembly 40348 na DUPY_contig000044 unplaced-scaffold na na LROM01000044.1 = NZ_LROM01000044.1 Primary Assembly 16849 na DUPY_contig000045 unplaced-scaffold na na LROM01000045.1 = NZ_LROM01000045.1 Primary Assembly 2196 na DUPY_contig000046 unplaced-scaffold na na LROM01000046.1 = NZ_LROM01000046.1 Primary Assembly 32541 na DUPY_contig000047 unplaced-scaffold na na LROM01000047.1 = NZ_LROM01000047.1 Primary Assembly 64313 na DUPY_contig000048 unplaced-scaffold na na LROM01000048.1 = NZ_LROM01000048.1 Primary Assembly 66215 na DUPY_contig000049 unplaced-scaffold na na LROM01000049.1 = NZ_LROM01000049.1 Primary Assembly 43579 na DUPY_contig000050 unplaced-scaffold na na LROM01000050.1 = NZ_LROM01000050.1 Primary Assembly 105783 na DUPY_contig000051 unplaced-scaffold na na LROM01000051.1 = NZ_LROM01000051.1 Primary Assembly 21778 na DUPY_contig000052 unplaced-scaffold na na LROM01000052.1 = NZ_LROM01000052.1 Primary Assembly 48241 na DUPY_contig000053 unplaced-scaffold na na LROM01000053.1 = NZ_LROM01000053.1 Primary Assembly 6794 na DUPY_contig000054 unplaced-scaffold na na LROM01000054.1 = NZ_LROM01000054.1 Primary Assembly 48026 na DUPY_contig000055 unplaced-scaffold na na LROM01000055.1 = NZ_LROM01000055.1 Primary Assembly 9071 na DUPY_contig000056 unplaced-scaffold na na LROM01000056.1 = NZ_LROM01000056.1 Primary Assembly 71574 na DUPY_contig000057 unplaced-scaffold na na LROM01000057.1 = NZ_LROM01000057.1 Primary Assembly 956 na DUPY_contig000058 unplaced-scaffold na na LROM01000058.1 = NZ_LROM01000058.1 Primary Assembly 47831 na DUPY_contig000059 unplaced-scaffold na na LROM01000059.1 = NZ_LROM01000059.1 Primary Assembly 99965 na DUPY_contig000060 unplaced-scaffold na na LROM01000060.1 = NZ_LROM01000060.1 Primary Assembly 83629 na DUPY_contig000061 unplaced-scaffold na na LROM01000061.1 = NZ_LROM01000061.1 Primary Assembly 79652 na DUPY_contig000062 unplaced-scaffold na na LROM01000062.1 = NZ_LROM01000062.1 Primary Assembly 81293 na DUPY_contig000063 unplaced-scaffold na na LROM01000063.1 = NZ_LROM01000063.1 Primary Assembly 13882 na DUPY_contig000064 unplaced-scaffold na na LROM01000064.1 = NZ_LROM01000064.1 Primary Assembly 576 na DUPY_contig000065 unplaced-scaffold na na LROM01000065.1 = NZ_LROM01000065.1 Primary Assembly 75139 na DUPY_contig000066 unplaced-scaffold na na LROM01000066.1 = NZ_LROM01000066.1 Primary Assembly 131294 na DUPY_contig000067 unplaced-scaffold na na LROM01000067.1 = NZ_LROM01000067.1 Primary Assembly 23294 na DUPY_contig000068 unplaced-scaffold na na LROM01000068.1 = NZ_LROM01000068.1 Primary Assembly 63994 na DUPY_contig000069 unplaced-scaffold na na LROM01000069.1 = NZ_LROM01000069.1 Primary Assembly 1729 na DUPY_contig000070 unplaced-scaffold na na LROM01000070.1 = NZ_LROM01000070.1 Primary Assembly 3968 na DUPY_contig000071 unplaced-scaffold na na LROM01000071.1 = NZ_LROM01000071.1 Primary Assembly 192415 na DUPY_contig000072 unplaced-scaffold na na LROM01000072.1 = NZ_LROM01000072.1 Primary Assembly 140336 na DUPY_contig000073 unplaced-scaffold na na LROM01000073.1 = NZ_LROM01000073.1 Primary Assembly 16180 na DUPY_contig000074 unplaced-scaffold na na LROM01000074.1 = NZ_LROM01000074.1 Primary Assembly 1305 na DUPY_contig000075 unplaced-scaffold na na LROM01000075.1 = NZ_LROM01000075.1 Primary Assembly 11870 na DUPY_contig000076 unplaced-scaffold na na LROM01000076.1 = NZ_LROM01000076.1 Primary Assembly 12839 na DUPY_contig000077 unplaced-scaffold na na LROM01000077.1 = NZ_LROM01000077.1 Primary Assembly 154395 na DUPY_contig000078 unplaced-scaffold na na LROM01000078.1 = NZ_LROM01000078.1 Primary Assembly 35946 na DUPY_contig000079 unplaced-scaffold na na LROM01000079.1 = NZ_LROM01000079.1 Primary Assembly 29495 na DUPY_contig000080 unplaced-scaffold na na LROM01000080.1 = NZ_LROM01000080.1 Primary Assembly 38218 na DUPY_contig000081 unplaced-scaffold na na LROM01000081.1 = NZ_LROM01000081.1 Primary Assembly 83562 na DUPY_contig000082 unplaced-scaffold na na LROM01000082.1 = NZ_LROM01000082.1 Primary Assembly 175917 na DUPY_contig000083 unplaced-scaffold na na LROM01000083.1 = NZ_LROM01000083.1 Primary Assembly 5965 na DUPY_contig000084 unplaced-scaffold na na LROM01000084.1 = NZ_LROM01000084.1 Primary Assembly 24312 na DUPY_contig000085 unplaced-scaffold na na LROM01000085.1 = NZ_LROM01000085.1 Primary Assembly 115814 na DUPY_contig000086 unplaced-scaffold na na LROM01000086.1 = NZ_LROM01000086.1 Primary Assembly 66675 na DUPY_contig000087 unplaced-scaffold na na LROM01000087.1 = NZ_LROM01000087.1 Primary Assembly 182469 na DUPY_contig000088 unplaced-scaffold na na LROM01000088.1 = NZ_LROM01000088.1 Primary Assembly 26776 na DUPY_contig000089 unplaced-scaffold na na LROM01000089.1 = NZ_LROM01000089.1 Primary Assembly 3810 na DUPY_contig000090 unplaced-scaffold na na LROM01000090.1 = NZ_LROM01000090.1 Primary Assembly 323203 na DUPY_contig000091 unplaced-scaffold na na LROM01000091.1 = NZ_LROM01000091.1 Primary Assembly 89223 na DUPY_contig000092 unplaced-scaffold na na LROM01000092.1 = NZ_LROM01000092.1 Primary Assembly 88707 na DUPY_contig000093 unplaced-scaffold na na LROM01000093.1 = NZ_LROM01000093.1 Primary Assembly 205536 na DUPY_contig000094 unplaced-scaffold na na LROM01000094.1 = NZ_LROM01000094.1 Primary Assembly 35503 na DUPY_contig000095 unplaced-scaffold na na LROM01000095.1 = NZ_LROM01000095.1 Primary Assembly 684 na DUPY_contig000096 unplaced-scaffold na na LROM01000096.1 = NZ_LROM01000096.1 Primary Assembly 87922 na DUPY_contig000097 unplaced-scaffold na na LROM01000097.1 = NZ_LROM01000097.1 Primary Assembly 69327 na DUPY_contig000098 unplaced-scaffold na na LROM01000098.1 = NZ_LROM01000098.1 Primary Assembly 49052 na DUPY_contig000099 unplaced-scaffold na na LROM01000099.1 = NZ_LROM01000099.1 Primary Assembly 16834 na DUPY_contig000100 unplaced-scaffold na na LROM01000100.1 = NZ_LROM01000100.1 Primary Assembly 618 na DUPY_contig000101 unplaced-scaffold na na LROM01000101.1 = NZ_LROM01000101.1 Primary Assembly 1744 na DUPY_contig000102 unplaced-scaffold na na LROM01000102.1 = NZ_LROM01000102.1 Primary Assembly 105141 na DUPY_contig000103 unplaced-scaffold na na LROM01000103.1 = NZ_LROM01000103.1 Primary Assembly 35276 na DUPY_contig000104 unplaced-scaffold na na LROM01000104.1 = NZ_LROM01000104.1 Primary Assembly 38919 na DUPY_contig000105 unplaced-scaffold na na LROM01000105.1 = NZ_LROM01000105.1 Primary Assembly 1218 na DUPY_contig000106 unplaced-scaffold na na LROM01000106.1 = NZ_LROM01000106.1 Primary Assembly 96031 na DUPY_contig000107 unplaced-scaffold na na LROM01000107.1 = NZ_LROM01000107.1 Primary Assembly 17840 na DUPY_contig000108 unplaced-scaffold na na LROM01000108.1 = NZ_LROM01000108.1 Primary Assembly 26430 na DUPY_contig000109 unplaced-scaffold na na LROM01000109.1 = NZ_LROM01000109.1 Primary Assembly 26197 na DUPY_contig000110 unplaced-scaffold na na LROM01000110.1 = NZ_LROM01000110.1 Primary Assembly 2103 na DUPY_contig000111 unplaced-scaffold na na LROM01000111.1 = NZ_LROM01000111.1 Primary Assembly 25673 na DUPY_contig000112 unplaced-scaffold na na LROM01000112.1 = NZ_LROM01000112.1 Primary Assembly 67485 na DUPY_contig000113 unplaced-scaffold na na LROM01000113.1 = NZ_LROM01000113.1 Primary Assembly 56036 na DUPY_contig000114 unplaced-scaffold na na LROM01000114.1 = NZ_LROM01000114.1 Primary Assembly 699 na DUPY_contig000115 unplaced-scaffold na na LROM01000115.1 = NZ_LROM01000115.1 Primary Assembly 54805 na DUPY_contig000116 unplaced-scaffold na na LROM01000116.1 = NZ_LROM01000116.1 Primary Assembly 25641 na DUPY_contig000117 unplaced-scaffold na na LROM01000117.1 = NZ_LROM01000117.1 Primary Assembly 9868 na DUPY_contig000118 unplaced-scaffold na na LROM01000118.1 = NZ_LROM01000118.1 Primary Assembly 32919 na DUPY_contig000119 unplaced-scaffold na na LROM01000119.1 = NZ_LROM01000119.1 Primary Assembly 25098 na DUPY_contig000120 unplaced-scaffold na na LROM01000120.1 = NZ_LROM01000120.1 Primary Assembly 20338 na DUPY_contig000121 unplaced-scaffold na na LROM01000121.1 = NZ_LROM01000121.1 Primary Assembly 15986 na DUPY_contig000122 unplaced-scaffold na na LROM01000122.1 = NZ_LROM01000122.1 Primary Assembly 23749 na DUPY_contig000123 unplaced-scaffold na na LROM01000123.1 = NZ_LROM01000123.1 Primary Assembly 20376 na DUPY_contig000124 unplaced-scaffold na na LROM01000124.1 = NZ_LROM01000124.1 Primary Assembly 44355 na DUPY_contig000125 unplaced-scaffold na na LROM01000125.1 = NZ_LROM01000125.1 Primary Assembly 67102 na DUPY_contig000126 unplaced-scaffold na na LROM01000126.1 = NZ_LROM01000126.1 Primary Assembly 11571 na DUPY_contig000127 unplaced-scaffold na na LROM01000127.1 = NZ_LROM01000127.1 Primary Assembly 20250 na DUPY_contig000128 unplaced-scaffold na na LROM01000128.1 = NZ_LROM01000128.1 Primary Assembly 28604 na DUPY_contig000129 unplaced-scaffold na na LROM01000129.1 = NZ_LROM01000129.1 Primary Assembly 19022 na DUPY_contig000130 unplaced-scaffold na na LROM01000130.1 = NZ_LROM01000130.1 Primary Assembly 26140 na DUPY_contig000131 unplaced-scaffold na na LROM01000131.1 = NZ_LROM01000131.1 Primary Assembly 106483 na DUPY_contig000132 unplaced-scaffold na na LROM01000132.1 = NZ_LROM01000132.1 Primary Assembly 5463 na DUPY_contig000133 unplaced-scaffold na na LROM01000133.1 = NZ_LROM01000133.1 Primary Assembly 16503 na DUPY_contig000134 unplaced-scaffold na na LROM01000134.1 = NZ_LROM01000134.1 Primary Assembly 76480 na DUPY_contig000135 unplaced-scaffold na na LROM01000135.1 = NZ_LROM01000135.1 Primary Assembly 786 na DUPY_contig000136 unplaced-scaffold na na LROM01000136.1 = NZ_LROM01000136.1 Primary Assembly 15834 na DUPY_contig000137 unplaced-scaffold na na LROM01000137.1 = NZ_LROM01000137.1 Primary Assembly 24731 na DUPY_contig000138 unplaced-scaffold na na LROM01000138.1 = NZ_LROM01000138.1 Primary Assembly 49534 na DUPY_contig000139 unplaced-scaffold na na LROM01000139.1 = NZ_LROM01000139.1 Primary Assembly 1949 na DUPY_contig000140 unplaced-scaffold na na LROM01000140.1 = NZ_LROM01000140.1 Primary Assembly 1715 na DUPY_contig000141 unplaced-scaffold na na LROM01000141.1 = NZ_LROM01000141.1 Primary Assembly 26373 na DUPY_contig000142 unplaced-scaffold na na LROM01000142.1 = NZ_LROM01000142.1 Primary Assembly 534 na DUPY_contig000143 unplaced-scaffold na na LROM01000143.1 = NZ_LROM01000143.1 Primary Assembly 39110 na DUPY_contig000144 unplaced-scaffold na na LROM01000144.1 = NZ_LROM01000144.1 Primary Assembly 7933 na DUPY_contig000145 unplaced-scaffold na na LROM01000145.1 = NZ_LROM01000145.1 Primary Assembly 3186 na DUPY_contig000146 unplaced-scaffold na na LROM01000146.1 = NZ_LROM01000146.1 Primary Assembly 1160 na DUPY_contig000147 unplaced-scaffold na na LROM01000147.1 = NZ_LROM01000147.1 Primary Assembly 174078 na DUPY_contig000148 unplaced-scaffold na na LROM01000148.1 = NZ_LROM01000148.1 Primary Assembly 27014 na DUPY_contig000149 unplaced-scaffold na na LROM01000149.1 = NZ_LROM01000149.1 Primary Assembly 34928 na DUPY_contig000150 unplaced-scaffold na na LROM01000150.1 = NZ_LROM01000150.1 Primary Assembly 5508 na DUPY_contig000151 unplaced-scaffold na na LROM01000151.1 = NZ_LROM01000151.1 Primary Assembly 38520 na DUPY_contig000152 unplaced-scaffold na na LROM01000152.1 = NZ_LROM01000152.1 Primary Assembly 209180 na DUPY_contig000153 unplaced-scaffold na na LROM01000153.1 = NZ_LROM01000153.1 Primary Assembly 2388 na DUPY_contig000154 unplaced-scaffold na na LROM01000154.1 = NZ_LROM01000154.1 Primary Assembly 21693 na DUPY_contig000155 unplaced-scaffold na na LROM01000155.1 = NZ_LROM01000155.1 Primary Assembly 3007 na DUPY_contig000156 unplaced-scaffold na na LROM01000156.1 = NZ_LROM01000156.1 Primary Assembly 118182 na DUPY_contig000157 unplaced-scaffold na na LROM01000157.1 = NZ_LROM01000157.1 Primary Assembly 571 na DUPY_contig000158 unplaced-scaffold na na LROM01000158.1 = NZ_LROM01000158.1 Primary Assembly 22691 na