# Assembly name: ASM188619v1 # Organism name: Enterococcus ratti (firmicutes) # Infraspecific name: strain=DSM 15687 # Taxid: 150033 # BioSample: SAMN03267184 # BioProject: PRJNA270385 # Submitter: Inner Mongolia Agricultural University # Date: 2016-11-25 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: JXLB01 # Assembly method: SOAPdenovo v. 2 # Expected final version: yes # Genome coverage: 100x # Sequencing technology: Illumina MiSeq; Illumina HiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_001886195.1 # RefSeq assembly accession: GCF_001886195.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_001886215.1 GCF_001886215.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Scaffold1 unplaced-scaffold na na JXLB01000001.1 = NZ_JXLB01000001.1 Primary Assembly 178889 na Scaffold2 unplaced-scaffold na na JXLB01000002.1 = NZ_JXLB01000002.1 Primary Assembly 172294 na Scaffold3 unplaced-scaffold na na JXLB01000003.1 = NZ_JXLB01000003.1 Primary Assembly 170647 na Scaffold4 unplaced-scaffold na na JXLB01000004.1 = NZ_JXLB01000004.1 Primary Assembly 145800 na Scaffold5 unplaced-scaffold na na JXLB01000005.1 = NZ_JXLB01000005.1 Primary Assembly 135734 na Scaffold6 unplaced-scaffold na na JXLB01000006.1 = NZ_JXLB01000006.1 Primary Assembly 133582 na Scaffold7 unplaced-scaffold na na JXLB01000007.1 = NZ_JXLB01000007.1 Primary Assembly 125588 na Scaffold8 unplaced-scaffold na na JXLB01000008.1 = NZ_JXLB01000008.1 Primary Assembly 123819 na Scaffold9 unplaced-scaffold na na JXLB01000009.1 = NZ_JXLB01000009.1 Primary Assembly 118830 na Scaffold10 unplaced-scaffold na na JXLB01000010.1 = NZ_JXLB01000010.1 Primary Assembly 105001 na Scaffold11 unplaced-scaffold na na JXLB01000011.1 = NZ_JXLB01000011.1 Primary Assembly 97154 na Scaffold12 unplaced-scaffold na na JXLB01000012.1 = NZ_JXLB01000012.1 Primary Assembly 96221 na Scaffold13 unplaced-scaffold na na JXLB01000013.1 = NZ_JXLB01000013.1 Primary Assembly 84641 na Scaffold14 unplaced-scaffold na na JXLB01000014.1 = NZ_JXLB01000014.1 Primary Assembly 73178 na Scaffold15 unplaced-scaffold na na JXLB01000015.1 = NZ_JXLB01000015.1 Primary Assembly 64335 na Scaffold16 unplaced-scaffold na na JXLB01000016.1 = NZ_JXLB01000016.1 Primary Assembly 56894 na Scaffold17 unplaced-scaffold na na JXLB01000017.1 = NZ_JXLB01000017.1 Primary Assembly 45587 na Scaffold18 unplaced-scaffold na na JXLB01000018.1 = NZ_JXLB01000018.1 Primary Assembly 41695 na Scaffold19 unplaced-scaffold na na JXLB01000019.1 = NZ_JXLB01000019.1 Primary Assembly 38692 na Scaffold20 unplaced-scaffold na na JXLB01000020.1 = NZ_JXLB01000020.1 Primary Assembly 37207 na Scaffold21 unplaced-scaffold na na JXLB01000021.1 = NZ_JXLB01000021.1 Primary Assembly 36305 na Scaffold22 unplaced-scaffold na na JXLB01000022.1 = NZ_JXLB01000022.1 Primary Assembly 32653 na Scaffold23 unplaced-scaffold na na JXLB01000023.1 = NZ_JXLB01000023.1 Primary Assembly 30516 na Scaffold24 unplaced-scaffold na na JXLB01000024.1 = NZ_JXLB01000024.1 Primary Assembly 29723 na Scaffold25 unplaced-scaffold na na JXLB01000025.1 = NZ_JXLB01000025.1 Primary Assembly 27447 na Scaffold26 unplaced-scaffold na na JXLB01000026.1 = NZ_JXLB01000026.1 Primary Assembly 26946 na Scaffold27 unplaced-scaffold na na JXLB01000027.1 = NZ_JXLB01000027.1 Primary Assembly 24997 na Scaffold28 unplaced-scaffold na na JXLB01000028.1 = NZ_JXLB01000028.1 Primary Assembly 24539 na Scaffold29 unplaced-scaffold na na JXLB01000029.1 = NZ_JXLB01000029.1 Primary Assembly 21644 na Scaffold30 unplaced-scaffold na na JXLB01000030.1 = NZ_JXLB01000030.1 Primary Assembly 20124 na Scaffold31 unplaced-scaffold na na JXLB01000031.1 = NZ_JXLB01000031.1 Primary Assembly 19595 na Scaffold32 unplaced-scaffold na na JXLB01000032.1 = NZ_JXLB01000032.1 Primary Assembly 18002 na Scaffold33 unplaced-scaffold na na JXLB01000033.1 = NZ_JXLB01000033.1 Primary Assembly 16474 na Scaffold34 unplaced-scaffold na na JXLB01000034.1 = NZ_JXLB01000034.1 Primary Assembly 13806 na Scaffold35 unplaced-scaffold na na JXLB01000035.1 = NZ_JXLB01000035.1 Primary Assembly 10811 na Scaffold36 unplaced-scaffold na na JXLB01000036.1 = NZ_JXLB01000036.1 Primary Assembly 9938 na Scaffold37 unplaced-scaffold na na JXLB01000037.1 = NZ_JXLB01000037.1 Primary Assembly 8765 na Scaffold38 unplaced-scaffold na na JXLB01000038.1 = NZ_JXLB01000038.1 Primary Assembly 7024 na Scaffold39 unplaced-scaffold na na JXLB01000039.1 = NZ_JXLB01000039.1 Primary Assembly 5045 na Scaffold40 unplaced-scaffold na na JXLB01000040.1 = NZ_JXLB01000040.1 Primary Assembly 4889 na Scaffold41 unplaced-scaffold na na JXLB01000041.1 = NZ_JXLB01000041.1 Primary Assembly 3975 na Scaffold42 unplaced-scaffold na na JXLB01000042.1 = NZ_JXLB01000042.1 Primary Assembly 3544 na Scaffold43 unplaced-scaffold na na JXLB01000043.1 = NZ_JXLB01000043.1 Primary Assembly 3410 na Scaffold44 unplaced-scaffold na na JXLB01000044.1 = NZ_JXLB01000044.1 Primary Assembly 3368 na Scaffold45 unplaced-scaffold na na JXLB01000045.1 = NZ_JXLB01000045.1 Primary Assembly 3268 na Scaffold46 unplaced-scaffold na na JXLB01000046.1 = NZ_JXLB01000046.1 Primary Assembly 2968 na Scaffold47 unplaced-scaffold na na JXLB01000047.1 = NZ_JXLB01000047.1 Primary Assembly 2179 na Scaffold48 unplaced-scaffold na na JXLB01000048.1 = NZ_JXLB01000048.1 Primary Assembly 1996 na Scaffold49 unplaced-scaffold na na JXLB01000049.1 = NZ_JXLB01000049.1 Primary Assembly 1989 na Scaffold50 unplaced-scaffold na na JXLB01000050.1 = NZ_JXLB01000050.1 Primary Assembly 1867 na Scaffold51 unplaced-scaffold na na JXLB01000051.1 = NZ_JXLB01000051.1 Primary Assembly 1767 na Scaffold52 unplaced-scaffold na na JXLB01000052.1 = NZ_JXLB01000052.1 Primary Assembly 1755 na Scaffold53 unplaced-scaffold na na JXLB01000053.1 = NZ_JXLB01000053.1 Primary Assembly 1713 na Scaffold54 unplaced-scaffold na na JXLB01000054.1 = NZ_JXLB01000054.1 Primary Assembly 1483 na Scaffold55 unplaced-scaffold na na JXLB01000055.1 = NZ_JXLB01000055.1 Primary Assembly 1337 na Scaffold56 unplaced-scaffold na na JXLB01000056.1 = NZ_JXLB01000056.1 Primary Assembly 1303 na Scaffold57 unplaced-scaffold na na JXLB01000057.1 = NZ_JXLB01000057.1 Primary Assembly 1280 na Scaffold58 unplaced-scaffold na na JXLB01000058.1 = NZ_JXLB01000058.1 Primary Assembly 1059 na Scaffold59 unplaced-scaffold na na JXLB01000059.1 = NZ_JXLB01000059.1 Primary Assembly 982 na Scaffold60 unplaced-scaffold na na JXLB01000060.1 = NZ_JXLB01000060.1 Primary Assembly 834 na Scaffold61 unplaced-scaffold na na JXLB01000061.1 = NZ_JXLB01000061.1 Primary Assembly 797 na Scaffold62 unplaced-scaffold na na JXLB01000062.1 = NZ_JXLB01000062.1 Primary Assembly 723 na Scaffold63 unplaced-scaffold na na JXLB01000063.1 = NZ_JXLB01000063.1 Primary Assembly 691 na Scaffold64 unplaced-scaffold na na JXLB01000064.1 = NZ_JXLB01000064.1 Primary Assembly 685 na Scaffold65 unplaced-scaffold na na JXLB01000065.1 = NZ_JXLB01000065.1 Primary Assembly 636 na Scaffold66 unplaced-scaffold na na JXLB01000066.1 = NZ_JXLB01000066.1 Primary Assembly 531 na Scaffold67 unplaced-scaffold na na JXLB01000067.1 = NZ_JXLB01000067.1 Primary Assembly 512 na Scaffold68 unplaced-scaffold na na JXLB01000068.1 = NZ_JXLB01000068.1 Primary Assembly 510 na Scaffold69 unplaced-scaffold na na JXLB01000069.1 = NZ_JXLB01000069.1 Primary Assembly 435 na Scaffold70 unplaced-scaffold na na JXLB01000070.1 = NZ_JXLB01000070.1 Primary Assembly 431 na Scaffold71 unplaced-scaffold na na JXLB01000071.1 = NZ_JXLB01000071.1 Primary Assembly 400 na Scaffold72 unplaced-scaffold na na JXLB01000072.1 = NZ_JXLB01000072.1 Primary Assembly 389 na Scaffold73 unplaced-scaffold na na JXLB01000073.1 = NZ_JXLB01000073.1 Primary Assembly 345 na Scaffold74 unplaced-scaffold na na JXLB01000074.1 = NZ_JXLB01000074.1 Primary Assembly 327 na Scaffold75 unplaced-scaffold na na JXLB01000075.1 = NZ_JXLB01000075.1 Primary Assembly 317 na Scaffold76 unplaced-scaffold na na JXLB01000076.1 = NZ_JXLB01000076.1 Primary Assembly 314 na Scaffold77 unplaced-scaffold na na JXLB01000077.1 = NZ_JXLB01000077.1 Primary Assembly 277 na Scaffold78 unplaced-scaffold na na JXLB01000078.1 = NZ_JXLB01000078.1 Primary Assembly 231 na