# Assembly name: ASM196883v1 # Organism name: Tersicoccus phoenicis (high G+C Gram-positive bacteria) # Infraspecific name: strain=1p05MA # Taxid: 554083 # BioSample: SAMN05893361 # BioProject: PRJNA347610 # Submitter: The University of Tokyo # Date: 2017-01-23 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: MRDE01 # Assembly method: Platanus v. 1.2.4 # Expected final version: yes # Genome coverage: 49.0x # Sequencing technology: Illumina MiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_001968835.1 # RefSeq assembly accession: GCF_001968835.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_001968875.1 GCF_001968875.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name scaffold1_cov334_read201 unplaced-scaffold na na MRDE01000001.1 = NZ_MRDE01000001.1 Primary Assembly 313 na scaffold2_cov301_read201 unplaced-scaffold na na MRDE01000002.1 = NZ_MRDE01000002.1 Primary Assembly 36695 na scaffold3_cov307_read201 unplaced-scaffold na na MRDE01000003.1 = NZ_MRDE01000003.1 Primary Assembly 21143 na scaffold4_cov369_read201 unplaced-scaffold na na MRDE01000004.1 = NZ_MRDE01000004.1 Primary Assembly 48431 na scaffold5_cov323_read201 unplaced-scaffold na na MRDE01000005.1 = NZ_MRDE01000005.1 Primary Assembly 22069 na scaffold6_cov320_read201_circular_cadidate unplaced-scaffold na na MRDE01000006.1 = NZ_MRDE01000006.1 Primary Assembly 119427 na scaffold7_cov300_read201 unplaced-scaffold na na MRDE01000007.1 = NZ_MRDE01000007.1 Primary Assembly 58061 na scaffold8_cov354_read201 unplaced-scaffold na na MRDE01000008.1 = NZ_MRDE01000008.1 Primary Assembly 3856 na scaffold9_cov303_read201 unplaced-scaffold na na MRDE01000009.1 = NZ_MRDE01000009.1 Primary Assembly 131106 na scaffold10_cov302_read201 unplaced-scaffold na na MRDE01000010.1 = NZ_MRDE01000010.1 Primary Assembly 31861 na scaffold11_cov273_read201 unplaced-scaffold na na MRDE01000011.1 = NZ_MRDE01000011.1 Primary Assembly 303 na scaffold12_cov450_read201 unplaced-scaffold na na MRDE01000012.1 = NZ_MRDE01000012.1 Primary Assembly 1986 na scaffold13_cov54_read201 unplaced-scaffold na na MRDE01000013.1 = NZ_MRDE01000013.1 Primary Assembly 548 na scaffold14_cov341_read201 unplaced-scaffold na na MRDE01000014.1 = NZ_MRDE01000014.1 Primary Assembly 8798 na scaffold15_cov332_read201 unplaced-scaffold na na MRDE01000015.1 = NZ_MRDE01000015.1 Primary Assembly 43194 na scaffold16_cov332_read201 unplaced-scaffold na na MRDE01000016.1 = NZ_MRDE01000016.1 Primary Assembly 248968 na scaffold17_cov326_read201 unplaced-scaffold na na MRDE01000017.1 = NZ_MRDE01000017.1 Primary Assembly 108378 na scaffold18_cov341_read201 unplaced-scaffold na na MRDE01000018.1 = NZ_MRDE01000018.1 Primary Assembly 52985 na scaffold19_cov397_read201 unplaced-scaffold na na MRDE01000019.1 = NZ_MRDE01000019.1 Primary Assembly 8273 na scaffold20_cov273_read201 unplaced-scaffold na na MRDE01000020.1 = NZ_MRDE01000020.1 Primary Assembly 2131 na scaffold21_cov307_read201 unplaced-scaffold na na MRDE01000021.1 = NZ_MRDE01000021.1 Primary Assembly 48121 na scaffold22_cov273_read201 unplaced-scaffold na na MRDE01000022.1 = NZ_MRDE01000022.1 Primary Assembly 115461 na scaffold23_cov334_read201 unplaced-scaffold na na MRDE01000023.1 = NZ_MRDE01000023.1 Primary Assembly 595 na scaffold24_cov316_read201 unplaced-scaffold na na MRDE01000024.1 = NZ_MRDE01000024.1 Primary Assembly 99127 na scaffold25_cov368_read201 unplaced-scaffold na na MRDE01000025.1 = NZ_MRDE01000025.1 Primary Assembly 300 na scaffold26_cov344_read201 unplaced-scaffold na na MRDE01000026.1 = NZ_MRDE01000026.1 Primary Assembly 87491 na scaffold27_cov324_read201 unplaced-scaffold na na MRDE01000027.1 = NZ_MRDE01000027.1 Primary Assembly 12942 na scaffold28_cov204_read201 unplaced-scaffold na na MRDE01000028.1 = NZ_MRDE01000028.1 Primary Assembly 563 na scaffold29_cov453_read201 unplaced-scaffold na na MRDE01000029.1 = NZ_MRDE01000029.1 Primary Assembly 1403 na scaffold30_cov197_read201 unplaced-scaffold na na MRDE01000030.1 = NZ_MRDE01000030.1 Primary Assembly 608 na scaffold31_cov453_read201 unplaced-scaffold na na MRDE01000031.1 = NZ_MRDE01000031.1 Primary Assembly 2793 na scaffold32_cov55_read201 unplaced-scaffold na na MRDE01000032.1 = NZ_MRDE01000032.1 Primary Assembly 512 na scaffold33_cov332_read201 unplaced-scaffold na na MRDE01000033.1 = NZ_MRDE01000033.1 Primary Assembly 303 na scaffold34_cov204_read201 unplaced-scaffold na na MRDE01000034.1 = NZ_MRDE01000034.1 Primary Assembly 303 na scaffold35_cov366_read201 unplaced-scaffold na na MRDE01000035.1 = NZ_MRDE01000035.1 Primary Assembly 33059 na scaffold36_cov362_read201 unplaced-scaffold na na MRDE01000036.1 = NZ_MRDE01000036.1 Primary Assembly 36848 na scaffold37_cov423_read201 unplaced-scaffold na na MRDE01000037.1 = NZ_MRDE01000037.1 Primary Assembly 990 na scaffold38_cov380_read201 unplaced-scaffold na na MRDE01000038.1 = NZ_MRDE01000038.1 Primary Assembly 35721 na scaffold40_cov379_read201 unplaced-scaffold na na MRDE01000039.1 = NZ_MRDE01000039.1 Primary Assembly 17932 na scaffold41_cov354_read201 unplaced-scaffold na na MRDE01000040.1 = NZ_MRDE01000040.1 Primary Assembly 4399 na scaffold42_cov531_read201 unplaced-scaffold na na MRDE01000041.1 = NZ_MRDE01000041.1 Primary Assembly 370 na scaffold43_cov359_read201 unplaced-scaffold na na MRDE01000042.1 = NZ_MRDE01000042.1 Primary Assembly 5614 na scaffold44_cov218_read201 unplaced-scaffold na na MRDE01000043.1 = NZ_MRDE01000043.1 Primary Assembly 345 na scaffold45_cov55_read201 unplaced-scaffold na na MRDE01000044.1 = NZ_MRDE01000044.1 Primary Assembly 556 na scaffold46_cov267_read201 unplaced-scaffold na na MRDE01000045.1 = NZ_MRDE01000045.1 Primary Assembly 1878 na scaffold47_cov355_read201 unplaced-scaffold na na MRDE01000046.1 = NZ_MRDE01000046.1 Primary Assembly 97961 na scaffold48_cov82_read201 unplaced-scaffold na na MRDE01000047.1 = NZ_MRDE01000047.1 Primary Assembly 344 na scaffold49_cov391_read201 unplaced-scaffold na na MRDE01000048.1 = NZ_MRDE01000048.1 Primary Assembly 1549 na scaffold50_cov280_read201 unplaced-scaffold na na MRDE01000049.1 = NZ_MRDE01000049.1 Primary Assembly 38348 na scaffold51_cov309_read201 unplaced-scaffold na na MRDE01000050.1 = NZ_MRDE01000050.1 Primary Assembly 57838 na scaffold52_cov82_read201 unplaced-scaffold na na MRDE01000051.1 = NZ_MRDE01000051.1 Primary Assembly 445 na scaffold53_cov338_read201 unplaced-scaffold na na MRDE01000052.1 = NZ_MRDE01000052.1 Primary Assembly 7423 na scaffold54_cov350_read201 unplaced-scaffold na na MRDE01000053.1 = NZ_MRDE01000053.1 Primary Assembly 69756 na scaffold55_cov398_read201 unplaced-scaffold na na MRDE01000054.1 = NZ_MRDE01000054.1 Primary Assembly 1878 na scaffold56_cov323_read201 unplaced-scaffold na na MRDE01000055.1 = NZ_MRDE01000055.1 Primary Assembly 28722 na scaffold57_cov286_read201 unplaced-scaffold na na MRDE01000056.1 = NZ_MRDE01000056.1 Primary Assembly 334 na scaffold58_cov354_read201 unplaced-scaffold na na MRDE01000057.1 = NZ_MRDE01000057.1 Primary Assembly 49077 na scaffold59_cov304_read201 unplaced-scaffold na na MRDE01000058.1 = NZ_MRDE01000058.1 Primary Assembly 24739 na scaffold60_cov470_read201 unplaced-scaffold na na MRDE01000059.1 = NZ_MRDE01000059.1 Primary Assembly 3241 na scaffold61_cov596_read201 unplaced-scaffold na na MRDE01000060.1 = NZ_MRDE01000060.1 Primary Assembly 656 na scaffold62_cov309_read201 unplaced-scaffold na na MRDE01000061.1 = NZ_MRDE01000061.1 Primary Assembly 643 na scaffold63_cov384_read201 unplaced-scaffold na na MRDE01000062.1 = NZ_MRDE01000062.1 Primary Assembly 6278 na scaffold65_cov292_read201 unplaced-scaffold na na MRDE01000063.1 = NZ_MRDE01000063.1 Primary Assembly 66259 na scaffold66_cov287_read201 unplaced-scaffold na na MRDE01000064.1 = NZ_MRDE01000064.1 Primary Assembly 179284 na scaffold67_cov246_read201 unplaced-scaffold na na MRDE01000065.1 = NZ_MRDE01000065.1 Primary Assembly 304 na scaffold68_cov359_read201 unplaced-scaffold na na MRDE01000066.1 = NZ_MRDE01000066.1 Primary Assembly 970 na scaffold69_cov341_read201 unplaced-scaffold na na MRDE01000067.1 = NZ_MRDE01000067.1 Primary Assembly 39862 na scaffold70_cov312_read201 unplaced-scaffold na na MRDE01000068.1 = NZ_MRDE01000068.1 Primary Assembly 203832 na scaffold71_cov417_read201 unplaced-scaffold na na MRDE01000069.1 = NZ_MRDE01000069.1 Primary Assembly 303 na scaffold72_cov411_read201 unplaced-scaffold na na MRDE01000070.1 = NZ_MRDE01000070.1 Primary Assembly 2500 na scaffold73_cov412_read201 unplaced-scaffold na na MRDE01000071.1 = NZ_MRDE01000071.1 Primary Assembly 718 na scaffold74_cov337_read201 unplaced-scaffold na na MRDE01000072.1 = NZ_MRDE01000072.1 Primary Assembly 248707 na scaffold75_cov245_read201 unplaced-scaffold na na MRDE01000073.1 = NZ_MRDE01000073.1 Primary Assembly 480 na scaffold76_cov313_read201 unplaced-scaffold na na MRDE01000074.1 = NZ_MRDE01000074.1 Primary Assembly 86332 na scaffold77_cov329_read201 unplaced-scaffold na na MRDE01000075.1 = NZ_MRDE01000075.1 Primary Assembly 43009 na scaffold78_cov357_read201 unplaced-scaffold na na MRDE01000076.1 = NZ_MRDE01000076.1 Primary Assembly 136625 na scaffold79_cov382_read201 unplaced-scaffold na na MRDE01000077.1 = NZ_MRDE01000077.1 Primary Assembly 2006 na scaffold80_cov328_read201 unplaced-scaffold na na MRDE01000078.1 = NZ_MRDE01000078.1 Primary Assembly 74924 na scaffold81_cov334_read201 unplaced-scaffold na na MRDE01000079.1 = NZ_MRDE01000079.1 Primary Assembly 542 na scaffold82_cov314_read201 unplaced-scaffold na na MRDE01000080.1 = NZ_MRDE01000080.1 Primary Assembly 37509 na scaffold83_cov329_read201 unplaced-scaffold na na MRDE01000081.1 = NZ_MRDE01000081.1 Primary Assembly 130674 na scaffold84_cov82_read201 unplaced-scaffold na na MRDE01000082.1 = NZ_MRDE01000082.1 Primary Assembly 445 na scaffold85_cov275_read201 unplaced-scaffold na na MRDE01000083.1 = NZ_MRDE01000083.1 Primary Assembly 34845 na scaffold86_cov437_read201 unplaced-scaffold na na MRDE01000084.1 = NZ_MRDE01000084.1 Primary Assembly 1075 na scaffold87_cov1466_read201 unplaced-scaffold na na MRDE01000085.1 = NZ_MRDE01000085.1 Primary Assembly 534 na scaffold88_cov1223_read201 unplaced-scaffold na na MRDE01000086.1 = NZ_MRDE01000086.1 Primary Assembly 976 na scaffold89_cov1663_read201 unplaced-scaffold na na MRDE01000087.1 = NZ_MRDE01000087.1 Primary Assembly 303 na scaffold90_cov825_read201 unplaced-scaffold na na MRDE01000088.1 = NZ_MRDE01000088.1 Primary Assembly 303 na scaffold91_cov323_read201 unplaced-scaffold na na MRDE01000089.1 = NZ_MRDE01000089.1 Primary Assembly 744 na scaffold92_cov1186_read201 unplaced-scaffold na na MRDE01000090.1 = NZ_MRDE01000090.1 Primary Assembly 934 na scaffold93_cov1486_read201 unplaced-scaffold na na MRDE01000091.1 = NZ_MRDE01000091.1 Primary Assembly 592 na scaffold94_cov376_read201 unplaced-scaffold na na MRDE01000092.1 = NZ_MRDE01000092.1 Primary Assembly 1996 na scaffold95_cov1084_read201 unplaced-scaffold na na MRDE01000093.1 = NZ_MRDE01000093.1 Primary Assembly 542 na scaffold96_cov1084_read201 unplaced-scaffold na na MRDE01000094.1 = NZ_MRDE01000094.1 Primary Assembly 554 na scaffold97_cov811_read201 unplaced-scaffold na na MRDE01000095.1 = NZ_MRDE01000095.1 Primary Assembly 345 na scaffold99_cov880_read201 unplaced-scaffold na na MRDE01000096.1 = NZ_MRDE01000096.1 Primary Assembly 2904 na scaffold100_cov417_read201 unplaced-scaffold na na MRDE01000097.1 = NZ_MRDE01000097.1 Primary Assembly 5892 na scaffold101_cov1084_read201 unplaced-scaffold na na MRDE01000098.1 = NZ_MRDE01000098.1 Primary Assembly 1266 na scaffold102_cov1663_read201 unplaced-scaffold na na MRDE01000099.1 = NZ_MRDE01000099.1 Primary Assembly 302 na scaffold104_cov400_read201 unplaced-scaffold na na MRDE01000100.1 = NZ_MRDE01000100.1 Primary Assembly 303 na scaffold105_cov772_read201 unplaced-scaffold na na MRDE01000101.1 = NZ_MRDE01000101.1 Primary Assembly 502 na scaffold106_cov872_read201 unplaced-scaffold na na MRDE01000102.1 = NZ_MRDE01000102.1 Primary Assembly 431 na scaffold107_cov688_read201 unplaced-scaffold na na MRDE01000103.1 = NZ_MRDE01000103.1 Primary Assembly 301 na scaffold108_cov1079_read201 unplaced-scaffold na na MRDE01000104.1 = NZ_MRDE01000104.1 Primary Assembly 694 na scaffold109_cov1638_read201 unplaced-scaffold na na MRDE01000105.1 = NZ_MRDE01000105.1 Primary Assembly 440 na scaffold110_cov947_read201 unplaced-scaffold na na MRDE01000106.1 = NZ_MRDE01000106.1 Primary Assembly 573 na scaffold112_cov609_read201 unplaced-scaffold na na MRDE01000107.1 = NZ_MRDE01000107.1 Primary Assembly 849 na scaffold113_cov831_read201 unplaced-scaffold na na MRDE01000108.1 = NZ_MRDE01000108.1 Primary Assembly 302 na scaffold114_cov2263_read201 unplaced-scaffold na na MRDE01000109.1 = NZ_MRDE01000109.1 Primary Assembly 303 na scaffold115_cov688_read201 unplaced-scaffold na na MRDE01000110.1 = NZ_MRDE01000110.1 Primary Assembly 303 na scaffold116_cov847_read201 unplaced-scaffold na na MRDE01000111.1 = NZ_MRDE01000111.1 Primary Assembly 643 na scaffold117_cov333_read201 unplaced-scaffold na na MRDE01000112.1 = NZ_MRDE01000112.1 Primary Assembly 593 na scaffold118_cov2263_read201 unplaced-scaffold na na MRDE01000113.1 = NZ_MRDE01000113.1 Primary Assembly 680 na scaffold119_cov382_read201 unplaced-scaffold na na MRDE01000114.1 = NZ_MRDE01000114.1 Primary Assembly 438 na scaffold120_cov365_read201 unplaced-scaffold na na MRDE01000115.1 = NZ_MRDE01000115.1 Primary Assembly 35511 na scaffold121_cov1663_read201 unplaced-scaffold na na MRDE01000116.1 = NZ_MRDE01000116.1 Primary Assembly 340 na scaffold122_cov825_read201 unplaced-scaffold na na MRDE01000117.1 = NZ_MRDE01000117.1 Primary Assembly 467 na scaffold124_cov886_read201 unplaced-scaffold na na MRDE01000118.1 = NZ_MRDE01000118.1 Primary Assembly 305 na scaffold125_cov811_read201 unplaced-scaffold na na MRDE01000119.1 = NZ_MRDE01000119.1 Primary Assembly 305 na scaffold126_cov453_read201 unplaced-scaffold na na MRDE01000120.1 = NZ_MRDE01000120.1 Primary Assembly 1135 na scaffold127_cov866_read201 unplaced-scaffold na na MRDE01000121.1 = NZ_MRDE01000121.1 Primary Assembly 492 na scaffold128_cov688_read201 unplaced-scaffold na na MRDE01000122.1 = NZ_MRDE01000122.1 Primary Assembly 303 na scaffold129_cov1084_read201 unplaced-scaffold na na MRDE01000123.1 = NZ_MRDE01000123.1 Primary Assembly 303 na scaffold130_cov825_read201 unplaced-scaffold na na MRDE01000124.1 = NZ_MRDE01000124.1 Primary Assembly 606 na scaffold131_cov353_read201 unplaced-scaffold na na MRDE01000125.1 = NZ_MRDE01000125.1 Primary Assembly 887 na scaffold132_cov661_read201 unplaced-scaffold na na MRDE01000126.1 = NZ_MRDE01000126.1 Primary Assembly 303 na scaffold133_cov872_read201 unplaced-scaffold na na MRDE01000127.1 = NZ_MRDE01000127.1 Primary Assembly 307 na scaffold134_cov1186_read201 unplaced-scaffold na na MRDE01000128.1 = NZ_MRDE01000128.1 Primary Assembly 303 na scaffold135_cov718_read201 unplaced-scaffold na na MRDE01000129.1 = NZ_MRDE01000129.1 Primary Assembly 307 na scaffold136_cov429_read201 unplaced-scaffold na na MRDE01000130.1 = NZ_MRDE01000130.1 Primary Assembly 2210 na scaffold137_cov1029_read201 unplaced-scaffold na na MRDE01000131.1 = NZ_MRDE01000131.1 Primary Assembly 1143 na scaffold139_cov381_read201 unplaced-scaffold na na MRDE01000132.1 = NZ_MRDE01000132.1 Primary Assembly 1597 na