# Assembly name: ASM210178v1 # Organism name: Mycobacterium palustre (high G+C Gram-positive bacteria) # Infraspecific name: strain=DSM 44572 # Taxid: 153971 # BioSample: SAMN04216940 # BioProject: PRJNA299467 # Submitter: University of Trento # Date: 2017-04-20 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: LQPJ01 # Assembly method: Spades v. 3.5.0 # Expected final version: yes # Genome coverage: 86x # Sequencing technology: Illumina HiSeq # Relation to type material: assembly from type material # RefSeq category: Representative Genome # GenBank assembly accession: GCA_002101785.1 # RefSeq assembly accession: GCF_002101785.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_002101805.1 GCF_002101805.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name contig_1 unplaced-scaffold na na LQPJ01000001.1 = NZ_LQPJ01000001.1 Primary Assembly 8954 na contig_10 unplaced-scaffold na na LQPJ01000002.1 = NZ_LQPJ01000002.1 Primary Assembly 14907 na contig_100 unplaced-scaffold na na LQPJ01000003.1 = NZ_LQPJ01000003.1 Primary Assembly 24357 na contig_101 unplaced-scaffold na na LQPJ01000004.1 = NZ_LQPJ01000004.1 Primary Assembly 43157 na contig_102 unplaced-scaffold na na LQPJ01000005.1 = NZ_LQPJ01000005.1 Primary Assembly 42303 na contig_103 unplaced-scaffold na na LQPJ01000006.1 = NZ_LQPJ01000006.1 Primary Assembly 3365 na contig_104 unplaced-scaffold na na LQPJ01000007.1 = NZ_LQPJ01000007.1 Primary Assembly 41819 na contig_105 unplaced-scaffold na na LQPJ01000008.1 = NZ_LQPJ01000008.1 Primary Assembly 64093 na contig_106 unplaced-scaffold na na LQPJ01000009.1 = NZ_LQPJ01000009.1 Primary Assembly 6836 na contig_107 unplaced-scaffold na na LQPJ01000010.1 = NZ_LQPJ01000010.1 Primary Assembly 1056 na contig_108 unplaced-scaffold na na LQPJ01000011.1 = NZ_LQPJ01000011.1 Primary Assembly 1250 na contig_109 unplaced-scaffold na na LQPJ01000012.1 = NZ_LQPJ01000012.1 Primary Assembly 6671 na contig_11 unplaced-scaffold na na LQPJ01000013.1 = NZ_LQPJ01000013.1 Primary Assembly 6250 na contig_110 unplaced-scaffold na na LQPJ01000014.1 = NZ_LQPJ01000014.1 Primary Assembly 19098 na contig_111 unplaced-scaffold na na LQPJ01000015.1 = NZ_LQPJ01000015.1 Primary Assembly 6641 na contig_112 unplaced-scaffold na na LQPJ01000016.1 = NZ_LQPJ01000016.1 Primary Assembly 6449 na contig_113 unplaced-scaffold na na LQPJ01000017.1 = NZ_LQPJ01000017.1 Primary Assembly 1031 na contig_114 unplaced-scaffold na na LQPJ01000018.1 = NZ_LQPJ01000018.1 Primary Assembly 5365 na contig_115 unplaced-scaffold na na LQPJ01000019.1 = NZ_LQPJ01000019.1 Primary Assembly 2152 na contig_116 unplaced-scaffold na na LQPJ01000020.1 = NZ_LQPJ01000020.1 Primary Assembly 34487 na contig_117 unplaced-scaffold na na LQPJ01000021.1 = NZ_LQPJ01000021.1 Primary Assembly 140531 na contig_118 unplaced-scaffold na na LQPJ01000022.1 = NZ_LQPJ01000022.1 Primary Assembly 4338 na contig_119 unplaced-scaffold na na LQPJ01000023.1 = NZ_LQPJ01000023.1 Primary Assembly 3587 na contig_12 unplaced-scaffold na na LQPJ01000024.1 = NZ_LQPJ01000024.1 Primary Assembly 114987 na contig_120 unplaced-scaffold na na LQPJ01000025.1 = NZ_LQPJ01000025.1 Primary Assembly 1109 na contig_121 unplaced-scaffold na na LQPJ01000026.1 = NZ_LQPJ01000026.1 Primary Assembly 1215 na contig_122 unplaced-scaffold na na LQPJ01000027.1 = NZ_LQPJ01000027.1 Primary Assembly 8367 na contig_123 unplaced-scaffold na na LQPJ01000028.1 = NZ_LQPJ01000028.1 Primary Assembly 3104 na contig_124 unplaced-scaffold na na LQPJ01000029.1 = NZ_LQPJ01000029.1 Primary Assembly 26126 na contig_125 unplaced-scaffold na na LQPJ01000030.1 = NZ_LQPJ01000030.1 Primary Assembly 2929 na contig_126 unplaced-scaffold na na LQPJ01000031.1 = NZ_LQPJ01000031.1 Primary Assembly 1315 na contig_127 unplaced-scaffold na na LQPJ01000032.1 = NZ_LQPJ01000032.1 Primary Assembly 7014 na contig_128 unplaced-scaffold na na LQPJ01000033.1 = NZ_LQPJ01000033.1 Primary Assembly 2286 na contig_129 unplaced-scaffold na na LQPJ01000034.1 = NZ_LQPJ01000034.1 Primary Assembly 1848 na contig_13 unplaced-scaffold na na LQPJ01000035.1 = NZ_LQPJ01000035.1 Primary Assembly 20763 na contig_130 unplaced-scaffold na na LQPJ01000036.1 = NZ_LQPJ01000036.1 Primary Assembly 1753 na contig_131 unplaced-scaffold na na LQPJ01000037.1 = NZ_LQPJ01000037.1 Primary Assembly 1356 na contig_132 unplaced-scaffold na na LQPJ01000038.1 = NZ_LQPJ01000038.1 Primary Assembly 1619 na contig_133 unplaced-scaffold na na LQPJ01000039.1 = NZ_LQPJ01000039.1 Primary Assembly 1385 na contig_134 unplaced-scaffold na na LQPJ01000040.1 = NZ_LQPJ01000040.1 Primary Assembly 1362 na contig_135 unplaced-scaffold na na LQPJ01000041.1 = NZ_LQPJ01000041.1 Primary Assembly 5280 na contig_136 unplaced-scaffold na na LQPJ01000042.1 = NZ_LQPJ01000042.1 Primary Assembly 1348 na contig_137 unplaced-scaffold na na LQPJ01000043.1 = NZ_LQPJ01000043.1 Primary Assembly 97873 na contig_138 unplaced-scaffold na na LQPJ01000044.1 = NZ_LQPJ01000044.1 Primary Assembly 1218 na contig_139 unplaced-scaffold na na LQPJ01000045.1 = NZ_LQPJ01000045.1 Primary Assembly 1495 na contig_14 unplaced-scaffold na na LQPJ01000046.1 = NZ_LQPJ01000046.1 Primary Assembly 15226 na contig_140 unplaced-scaffold na na LQPJ01000047.1 = NZ_LQPJ01000047.1 Primary Assembly 1192 na contig_141 unplaced-scaffold na na LQPJ01000048.1 = NZ_LQPJ01000048.1 Primary Assembly 1189 na contig_142 unplaced-scaffold na na LQPJ01000049.1 = NZ_LQPJ01000049.1 Primary Assembly 1167 na contig_143 unplaced-scaffold na na LQPJ01000050.1 = NZ_LQPJ01000050.1 Primary Assembly 1118 na contig_144 unplaced-scaffold na na LQPJ01000051.1 = NZ_LQPJ01000051.1 Primary Assembly 1018 na contig_145 unplaced-scaffold na na LQPJ01000052.1 = NZ_LQPJ01000052.1 Primary Assembly 57963 na contig_146 unplaced-scaffold na na LQPJ01000053.1 = NZ_LQPJ01000053.1 Primary Assembly 13981 na contig_147 unplaced-scaffold na na LQPJ01000054.1 = NZ_LQPJ01000054.1 Primary Assembly 18493 na contig_148 unplaced-scaffold na na LQPJ01000055.1 = NZ_LQPJ01000055.1 Primary Assembly 21542 na contig_149 unplaced-scaffold na na LQPJ01000056.1 = NZ_LQPJ01000056.1 Primary Assembly 17141 na contig_15 unplaced-scaffold na na LQPJ01000057.1 = NZ_LQPJ01000057.1 Primary Assembly 15982 na contig_150 unplaced-scaffold na na LQPJ01000058.1 = NZ_LQPJ01000058.1 Primary Assembly 21909 na contig_151 unplaced-scaffold na na LQPJ01000059.1 = NZ_LQPJ01000059.1 Primary Assembly 77575 na contig_152 unplaced-scaffold na na LQPJ01000060.1 = NZ_LQPJ01000060.1 Primary Assembly 5521 na contig_153 unplaced-scaffold na na LQPJ01000061.1 = NZ_LQPJ01000061.1 Primary Assembly 20063 na contig_154 unplaced-scaffold na na LQPJ01000062.1 = NZ_LQPJ01000062.1 Primary Assembly 1832 na contig_155 unplaced-scaffold na na LQPJ01000063.1 = NZ_LQPJ01000063.1 Primary Assembly 3368 na contig_156 unplaced-scaffold na na LQPJ01000064.1 = NZ_LQPJ01000064.1 Primary Assembly 76048 na contig_157 unplaced-scaffold na na LQPJ01000065.1 = NZ_LQPJ01000065.1 Primary Assembly 31414 na contig_158 unplaced-scaffold na na LQPJ01000066.1 = NZ_LQPJ01000066.1 Primary Assembly 49631 na contig_16 unplaced-scaffold na na LQPJ01000067.1 = NZ_LQPJ01000067.1 Primary Assembly 40072 na contig_17 unplaced-scaffold na na LQPJ01000068.1 = NZ_LQPJ01000068.1 Primary Assembly 2707 na contig_18 unplaced-scaffold na na LQPJ01000069.1 = NZ_LQPJ01000069.1 Primary Assembly 25777 na contig_19 unplaced-scaffold na na LQPJ01000070.1 = NZ_LQPJ01000070.1 Primary Assembly 187166 na contig_2 unplaced-scaffold na na LQPJ01000071.1 = NZ_LQPJ01000071.1 Primary Assembly 22236 na contig_20 unplaced-scaffold na na LQPJ01000072.1 = NZ_LQPJ01000072.1 Primary Assembly 27058 na contig_21 unplaced-scaffold na na LQPJ01000073.1 = NZ_LQPJ01000073.1 Primary Assembly 19405 na contig_22 unplaced-scaffold na na LQPJ01000074.1 = NZ_LQPJ01000074.1 Primary Assembly 8532 na contig_23 unplaced-scaffold na na LQPJ01000075.1 = NZ_LQPJ01000075.1 Primary Assembly 28289 na contig_24 unplaced-scaffold na na LQPJ01000076.1 = NZ_LQPJ01000076.1 Primary Assembly 24114 na contig_25 unplaced-scaffold na na LQPJ01000077.1 = NZ_LQPJ01000077.1 Primary Assembly 2798 na contig_26 unplaced-scaffold na na LQPJ01000078.1 = NZ_LQPJ01000078.1 Primary Assembly 112141 na contig_27 unplaced-scaffold na na LQPJ01000079.1 = NZ_LQPJ01000079.1 Primary Assembly 29964 na contig_28 unplaced-scaffold na na LQPJ01000080.1 = NZ_LQPJ01000080.1 Primary Assembly 30636 na contig_29 unplaced-scaffold na na LQPJ01000081.1 = NZ_LQPJ01000081.1 Primary Assembly 10090 na contig_3 unplaced-scaffold na na LQPJ01000082.1 = NZ_LQPJ01000082.1 Primary Assembly 9584 na contig_30 unplaced-scaffold na na LQPJ01000083.1 = NZ_LQPJ01000083.1 Primary Assembly 31227 na contig_31 unplaced-scaffold na na LQPJ01000084.1 = NZ_LQPJ01000084.1 Primary Assembly 31277 na contig_32 unplaced-scaffold na na LQPJ01000085.1 = NZ_LQPJ01000085.1 Primary Assembly 28375 na contig_33 unplaced-scaffold na na LQPJ01000086.1 = NZ_LQPJ01000086.1 Primary Assembly 3956 na contig_34 unplaced-scaffold na na LQPJ01000087.1 = NZ_LQPJ01000087.1 Primary Assembly 19422 na contig_35 unplaced-scaffold na na LQPJ01000088.1 = NZ_LQPJ01000088.1 Primary Assembly 34043 na contig_36 unplaced-scaffold na na LQPJ01000089.1 = NZ_LQPJ01000089.1 Primary Assembly 33950 na contig_37 unplaced-scaffold na na LQPJ01000090.1 = NZ_LQPJ01000090.1 Primary Assembly 80033 na contig_38 unplaced-scaffold na na LQPJ01000091.1 = NZ_LQPJ01000091.1 Primary Assembly 87614 na contig_39 unplaced-scaffold na na LQPJ01000092.1 = NZ_LQPJ01000092.1 Primary Assembly 8197 na contig_4 unplaced-scaffold na na LQPJ01000093.1 = NZ_LQPJ01000093.1 Primary Assembly 1023 na contig_40 unplaced-scaffold na na LQPJ01000094.1 = NZ_LQPJ01000094.1 Primary Assembly 94372 na contig_41 unplaced-scaffold na na LQPJ01000095.1 = NZ_LQPJ01000095.1 Primary Assembly 65314 na contig_42 unplaced-scaffold na na LQPJ01000096.1 = NZ_LQPJ01000096.1 Primary Assembly 20705 na contig_43 unplaced-scaffold na na LQPJ01000097.1 = NZ_LQPJ01000097.1 Primary Assembly 86242 na contig_44 unplaced-scaffold na na LQPJ01000098.1 = NZ_LQPJ01000098.1 Primary Assembly 172118 na contig_45 unplaced-scaffold na na LQPJ01000099.1 = NZ_LQPJ01000099.1 Primary Assembly 93306 na contig_46 unplaced-scaffold na na LQPJ01000100.1 = NZ_LQPJ01000100.1 Primary Assembly 94981 na contig_47 unplaced-scaffold na na LQPJ01000101.1 = NZ_LQPJ01000101.1 Primary Assembly 95896 na contig_48 unplaced-scaffold na na LQPJ01000102.1 = NZ_LQPJ01000102.1 Primary Assembly 156771 na contig_49 unplaced-scaffold na na LQPJ01000103.1 = NZ_LQPJ01000103.1 Primary Assembly 14946 na contig_5 unplaced-scaffold na na LQPJ01000104.1 = NZ_LQPJ01000104.1 Primary Assembly 12032 na contig_50 unplaced-scaffold na na LQPJ01000105.1 = NZ_LQPJ01000105.1 Primary Assembly 85200 na contig_51 unplaced-scaffold na na LQPJ01000106.1 = NZ_LQPJ01000106.1 Primary Assembly 72763 na contig_52 unplaced-scaffold na na LQPJ01000107.1 = NZ_LQPJ01000107.1 Primary Assembly 110423 na contig_53 unplaced-scaffold na na LQPJ01000108.1 = NZ_LQPJ01000108.1 Primary Assembly 17404 na contig_54 unplaced-scaffold na na LQPJ01000109.1 = NZ_LQPJ01000109.1 Primary Assembly 193127 na contig_55 unplaced-scaffold na na LQPJ01000110.1 = NZ_LQPJ01000110.1 Primary Assembly 49190 na contig_56 unplaced-scaffold na na LQPJ01000111.1 = NZ_LQPJ01000111.1 Primary Assembly 11388 na contig_57 unplaced-scaffold na na LQPJ01000112.1 = NZ_LQPJ01000112.1 Primary Assembly 133248 na contig_58 unplaced-scaffold na na LQPJ01000113.1 = NZ_LQPJ01000113.1 Primary Assembly 13201 na contig_59 unplaced-scaffold na na LQPJ01000114.1 = NZ_LQPJ01000114.1 Primary Assembly 39231 na contig_6 unplaced-scaffold na na LQPJ01000115.1 = NZ_LQPJ01000115.1 Primary Assembly 127135 na contig_60 unplaced-scaffold na na LQPJ01000116.1 = NZ_LQPJ01000116.1 Primary Assembly 69218 na contig_61 unplaced-scaffold na na LQPJ01000117.1 = NZ_LQPJ01000117.1 Primary Assembly 1146 na contig_62 unplaced-scaffold na na LQPJ01000118.1 = NZ_LQPJ01000118.1 Primary Assembly 49136 na contig_63 unplaced-scaffold na na LQPJ01000119.1 = NZ_LQPJ01000119.1 Primary Assembly 33489 na contig_64 unplaced-scaffold na na LQPJ01000120.1 = NZ_LQPJ01000120.1 Primary Assembly 3772 na contig_65 unplaced-scaffold na na LQPJ01000121.1 = NZ_LQPJ01000121.1 Primary Assembly 142961 na contig_66 unplaced-scaffold na na LQPJ01000122.1 = NZ_LQPJ01000122.1 Primary Assembly 12226 na contig_67 unplaced-scaffold na na LQPJ01000123.1 = NZ_LQPJ01000123.1 Primary Assembly 10159 na contig_68 unplaced-scaffold na na LQPJ01000124.1 = NZ_LQPJ01000124.1 Primary Assembly 151512 na contig_69 unplaced-scaffold na na LQPJ01000125.1 = NZ_LQPJ01000125.1 Primary Assembly 7195 na contig_7 unplaced-scaffold na na LQPJ01000126.1 = NZ_LQPJ01000126.1 Primary Assembly 12127 na contig_70 unplaced-scaffold na na LQPJ01000127.1 = NZ_LQPJ01000127.1 Primary Assembly 133444 na contig_71 unplaced-scaffold na na LQPJ01000128.1 = NZ_LQPJ01000128.1 Primary Assembly 11535 na contig_72 unplaced-scaffold na na LQPJ01000129.1 = NZ_LQPJ01000129.1 Primary Assembly 2109 na contig_73 unplaced-scaffold na na LQPJ01000130.1 = NZ_LQPJ01000130.1 Primary Assembly 171056 na contig_74 unplaced-scaffold na na LQPJ01000131.1 = NZ_LQPJ01000131.1 Primary Assembly 34913 na contig_75 unplaced-scaffold na na LQPJ01000132.1 = NZ_LQPJ01000132.1 Primary Assembly 10520 na contig_76 unplaced-scaffold na na LQPJ01000133.1 = NZ_LQPJ01000133.1 Primary Assembly 1298 na contig_77 unplaced-scaffold na na LQPJ01000134.1 = NZ_LQPJ01000134.1 Primary Assembly 22313 na contig_78 unplaced-scaffold na na LQPJ01000135.1 = NZ_LQPJ01000135.1 Primary Assembly 73784 na contig_79 unplaced-scaffold na na LQPJ01000136.1 = NZ_LQPJ01000136.1 Primary Assembly 266450 na contig_8 unplaced-scaffold na na LQPJ01000137.1 = NZ_LQPJ01000137.1 Primary Assembly 4406 na contig_80 unplaced-scaffold na na LQPJ01000138.1 = NZ_LQPJ01000138.1 Primary Assembly 1191 na contig_81 unplaced-scaffold na na LQPJ01000139.1 = NZ_LQPJ01000139.1 Primary Assembly 80891 na contig_82 unplaced-scaffold na na LQPJ01000140.1 = NZ_LQPJ01000140.1 Primary Assembly 74274 na contig_83 unplaced-scaffold na na LQPJ01000141.1 = NZ_LQPJ01000141.1 Primary Assembly 27191 na contig_84 unplaced-scaffold na na LQPJ01000142.1 = NZ_LQPJ01000142.1 Primary Assembly 45236 na contig_85 unplaced-scaffold na na LQPJ01000143.1 = NZ_LQPJ01000143.1 Primary Assembly 53329 na contig_86 unplaced-scaffold na na LQPJ01000144.1 = NZ_LQPJ01000144.1 Primary Assembly 70216 na contig_87 unplaced-scaffold na na LQPJ01000145.1 = NZ_LQPJ01000145.1 Primary Assembly 20095 na contig_88 unplaced-scaffold na na LQPJ01000146.1 = NZ_LQPJ01000146.1 Primary Assembly 45038 na contig_89 unplaced-scaffold na na LQPJ01000147.1 = NZ_LQPJ01000147.1 Primary Assembly 58551 na contig_9 unplaced-scaffold na na LQPJ01000148.1 = NZ_LQPJ01000148.1 Primary Assembly 12519 na contig_90 unplaced-scaffold na na LQPJ01000149.1 = NZ_LQPJ01000149.1 Primary Assembly 3538 na contig_91 unplaced-scaffold na na LQPJ01000150.1 = NZ_LQPJ01000150.1 Primary Assembly 7597 na contig_92 unplaced-scaffold na na LQPJ01000151.1 = NZ_LQPJ01000151.1 Primary Assembly 65079 na contig_93 unplaced-scaffold na na LQPJ01000152.1 = NZ_LQPJ01000152.1 Primary Assembly 43278 na contig_94 unplaced-scaffold na na LQPJ01000153.1 = NZ_LQPJ01000153.1 Primary Assembly 54687 na contig_95 unplaced-scaffold na na LQPJ01000154.1 = NZ_LQPJ01000154.1 Primary Assembly 30871 na contig_96 unplaced-scaffold na na LQPJ01000155.1 = NZ_LQPJ01000155.1 Primary Assembly 47933 na contig_97 unplaced-scaffold na na LQPJ01000156.1 = NZ_LQPJ01000156.1 Primary Assembly 73675 na contig_98 unplaced-scaffold na na LQPJ01000157.1 = NZ_LQPJ01000157.1 Primary Assembly 48333 na contig_99 unplaced-scaffold na na LQPJ01000158.1 = NZ_LQPJ01000158.1 Primary Assembly 2730 na