# Assembly name: ASM210467v1 # Organism name: Mycobacterium decipiens (high G+C Gram-positive bacteria) # Infraspecific name: strain=TBL 1200985 # Taxid: 1430326 # BioSample: SAMN06651657 # BioProject: PRJNA354248 # Submitter: San Raffaele Scientific Institute # Date: 2017-04-21 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: NCXP01 # Assembly method: SPAdes v. 3.9.1 # Expected final version: yes # Genome coverage: 44.9x # Sequencing technology: Illumina # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_002104675.1 # RefSeq assembly accession: GCF_002104675.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_002104685.1 GCF_002104685.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name NODE_1_length_535535_cov_45.3383 unplaced-scaffold na na NCXP01000001.1 = NZ_NCXP01000001.1 Primary Assembly 535535 na NODE_2_length_340357_cov_44.9617 unplaced-scaffold na na NCXP01000002.1 = NZ_NCXP01000002.1 Primary Assembly 340357 na NODE_3_length_247415_cov_45.2209 unplaced-scaffold na na NCXP01000003.1 = NZ_NCXP01000003.1 Primary Assembly 247415 na NODE_4_length_239152_cov_45.434 unplaced-scaffold na na NCXP01000004.1 = NZ_NCXP01000004.1 Primary Assembly 239152 na NODE_5_length_215683_cov_43.2946 unplaced-scaffold na na NCXP01000005.1 = NZ_NCXP01000005.1 Primary Assembly 215683 na NODE_6_length_199076_cov_43.4839 unplaced-scaffold na na NCXP01000006.1 = NZ_NCXP01000006.1 Primary Assembly 199076 na NODE_7_length_194728_cov_47.445 unplaced-scaffold na na NCXP01000007.1 = NZ_NCXP01000007.1 Primary Assembly 194728 na NODE_8_length_181084_cov_44.9823 unplaced-scaffold na na NCXP01000008.1 = NZ_NCXP01000008.1 Primary Assembly 181084 na NODE_9_length_165485_cov_44.7217 unplaced-scaffold na na NCXP01000009.1 = NZ_NCXP01000009.1 Primary Assembly 165485 na NODE_10_length_144315_cov_44.5524 unplaced-scaffold na na NCXP01000010.1 = NZ_NCXP01000010.1 Primary Assembly 144315 na NODE_11_length_133788_cov_44.2079 unplaced-scaffold na na NCXP01000011.1 = NZ_NCXP01000011.1 Primary Assembly 133788 na NODE_12_length_114870_cov_45.0848 unplaced-scaffold na na NCXP01000012.1 = NZ_NCXP01000012.1 Primary Assembly 114870 na NODE_13_length_111677_cov_45.5317 unplaced-scaffold na na NCXP01000013.1 = NZ_NCXP01000013.1 Primary Assembly 111677 na NODE_14_length_104345_cov_42.5315 unplaced-scaffold na na NCXP01000014.1 = NZ_NCXP01000014.1 Primary Assembly 104345 na NODE_15_length_103035_cov_43.9972 unplaced-scaffold na na NCXP01000015.1 = NZ_NCXP01000015.1 Primary Assembly 103035 na NODE_16_length_98333_cov_48.9135 unplaced-scaffold na na NCXP01000016.1 = NZ_NCXP01000016.1 Primary Assembly 98333 na NODE_17_length_97905_cov_46.0913 unplaced-scaffold na na NCXP01000017.1 = NZ_NCXP01000017.1 Primary Assembly 97905 na NODE_18_length_95000_cov_48.8365 unplaced-scaffold na na NCXP01000018.1 = NZ_NCXP01000018.1 Primary Assembly 95000 na NODE_19_length_94976_cov_43.8359 unplaced-scaffold na na NCXP01000019.1 = NZ_NCXP01000019.1 Primary Assembly 94976 na NODE_20_length_79548_cov_43.3613 unplaced-scaffold na na NCXP01000020.1 = NZ_NCXP01000020.1 Primary Assembly 79548 na NODE_21_length_77878_cov_43.0886 unplaced-scaffold na na NCXP01000021.1 = NZ_NCXP01000021.1 Primary Assembly 77878 na NODE_22_length_74817_cov_48.3208 unplaced-scaffold na na NCXP01000022.1 = NZ_NCXP01000022.1 Primary Assembly 74817 na NODE_23_length_70262_cov_42.5819 unplaced-scaffold na na NCXP01000023.1 = NZ_NCXP01000023.1 Primary Assembly 70262 na NODE_24_length_69460_cov_46.8134 unplaced-scaffold na na NCXP01000024.1 = NZ_NCXP01000024.1 Primary Assembly 69460 na NODE_25_length_68711_cov_46.0942 unplaced-scaffold na na NCXP01000025.1 = NZ_NCXP01000025.1 Primary Assembly 68711 na NODE_26_length_66885_cov_42.8599 unplaced-scaffold na na NCXP01000026.1 = NZ_NCXP01000026.1 Primary Assembly 66885 na NODE_27_length_60395_cov_42.1324 unplaced-scaffold na na NCXP01000027.1 = NZ_NCXP01000027.1 Primary Assembly 60395 na NODE_28_length_59307_cov_45.566 unplaced-scaffold na na NCXP01000028.1 = NZ_NCXP01000028.1 Primary Assembly 59307 na NODE_29_length_57841_cov_44.4632 unplaced-scaffold na na NCXP01000029.1 = NZ_NCXP01000029.1 Primary Assembly 57841 na NODE_30_length_52676_cov_45.9478 unplaced-scaffold na na NCXP01000030.1 = NZ_NCXP01000030.1 Primary Assembly 52676 na NODE_31_length_48290_cov_46.9293 unplaced-scaffold na na NCXP01000031.1 = NZ_NCXP01000031.1 Primary Assembly 48290 na NODE_32_length_47424_cov_42.0772 unplaced-scaffold na na NCXP01000032.1 = NZ_NCXP01000032.1 Primary Assembly 47424 na NODE_33_length_46806_cov_45.293 unplaced-scaffold na na NCXP01000033.1 = NZ_NCXP01000033.1 Primary Assembly 46806 na NODE_34_length_44764_cov_51.8784 unplaced-scaffold na na NCXP01000034.1 = NZ_NCXP01000034.1 Primary Assembly 44764 na NODE_35_length_43777_cov_47.9707 unplaced-scaffold na na NCXP01000035.1 = NZ_NCXP01000035.1 Primary Assembly 43777 na NODE_36_length_41679_cov_49.4296 unplaced-scaffold na na NCXP01000036.1 = NZ_NCXP01000036.1 Primary Assembly 41679 na NODE_37_length_41560_cov_43.7067 unplaced-scaffold na na NCXP01000037.1 = NZ_NCXP01000037.1 Primary Assembly 41560 na NODE_38_length_39448_cov_43.6448 unplaced-scaffold na na NCXP01000038.1 = NZ_NCXP01000038.1 Primary Assembly 39448 na NODE_39_length_39367_cov_46.0278 unplaced-scaffold na na NCXP01000039.1 = NZ_NCXP01000039.1 Primary Assembly 39367 na NODE_40_length_37806_cov_45.554 unplaced-scaffold na na NCXP01000040.1 = NZ_NCXP01000040.1 Primary Assembly 37806 na NODE_41_length_37691_cov_47.1476 unplaced-scaffold na na NCXP01000041.1 = NZ_NCXP01000041.1 Primary Assembly 37691 na NODE_42_length_34275_cov_41.2974 unplaced-scaffold na na NCXP01000042.1 = NZ_NCXP01000042.1 Primary Assembly 34275 na NODE_43_length_33248_cov_40.7474 unplaced-scaffold na na NCXP01000043.1 = NZ_NCXP01000043.1 Primary Assembly 33248 na NODE_44_length_31421_cov_40.1989 unplaced-scaffold na na NCXP01000044.1 = NZ_NCXP01000044.1 Primary Assembly 31421 na NODE_45_length_30360_cov_41.8202 unplaced-scaffold na na NCXP01000045.1 = NZ_NCXP01000045.1 Primary Assembly 30360 na NODE_46_length_30132_cov_44.7699 unplaced-scaffold na na NCXP01000046.1 = NZ_NCXP01000046.1 Primary Assembly 30132 na NODE_47_length_28884_cov_44.2807 unplaced-scaffold na na NCXP01000047.1 = NZ_NCXP01000047.1 Primary Assembly 28884 na NODE_48_length_27430_cov_39.5827 unplaced-scaffold na na NCXP01000048.1 = NZ_NCXP01000048.1 Primary Assembly 27430 na NODE_49_length_24237_cov_42.6058 unplaced-scaffold na na NCXP01000049.1 = NZ_NCXP01000049.1 Primary Assembly 24237 na NODE_50_length_24129_cov_46.3539 unplaced-scaffold na na NCXP01000050.1 = NZ_NCXP01000050.1 Primary Assembly 24129 na NODE_51_length_22704_cov_44.2619 unplaced-scaffold na na NCXP01000051.1 = NZ_NCXP01000051.1 Primary Assembly 22704 na NODE_52_length_21525_cov_37.2892 unplaced-scaffold na na NCXP01000052.1 = NZ_NCXP01000052.1 Primary Assembly 21525 na NODE_53_length_20537_cov_40.0886 unplaced-scaffold na na NCXP01000053.1 = NZ_NCXP01000053.1 Primary Assembly 20537 na NODE_54_length_18503_cov_38.9443 unplaced-scaffold na na NCXP01000054.1 = NZ_NCXP01000054.1 Primary Assembly 18503 na NODE_55_length_18250_cov_45.9277 unplaced-scaffold na na NCXP01000055.1 = NZ_NCXP01000055.1 Primary Assembly 18250 na NODE_56_length_15273_cov_42.9148 unplaced-scaffold na na NCXP01000056.1 = NZ_NCXP01000056.1 Primary Assembly 15273 na NODE_57_length_14832_cov_43.9181 unplaced-scaffold na na NCXP01000057.1 = NZ_NCXP01000057.1 Primary Assembly 14832 na NODE_58_length_14318_cov_48.783 unplaced-scaffold na na NCXP01000058.1 = NZ_NCXP01000058.1 Primary Assembly 14318 na NODE_59_length_13511_cov_43.6228 unplaced-scaffold na na NCXP01000059.1 = NZ_NCXP01000059.1 Primary Assembly 13511 na NODE_60_length_13068_cov_47.5548 unplaced-scaffold na na NCXP01000060.1 = NZ_NCXP01000060.1 Primary Assembly 13068 na NODE_61_length_12821_cov_43.7796 unplaced-scaffold na na NCXP01000061.1 = NZ_NCXP01000061.1 Primary Assembly 12821 na NODE_62_length_12268_cov_38.7377 unplaced-scaffold na na NCXP01000062.1 = NZ_NCXP01000062.1 Primary Assembly 12268 na NODE_63_length_11685_cov_43.1139 unplaced-scaffold na na NCXP01000063.1 = NZ_NCXP01000063.1 Primary Assembly 11685 na NODE_64_length_11037_cov_43.1774 unplaced-scaffold na na NCXP01000064.1 = NZ_NCXP01000064.1 Primary Assembly 11037 na NODE_65_length_10760_cov_40.6022 unplaced-scaffold na na NCXP01000065.1 = NZ_NCXP01000065.1 Primary Assembly 10760 na NODE_66_length_7457_cov_41.5729 unplaced-scaffold na na NCXP01000066.1 = NZ_NCXP01000066.1 Primary Assembly 7457 na NODE_67_length_6517_cov_41.2936 unplaced-scaffold na na NCXP01000067.1 = NZ_NCXP01000067.1 Primary Assembly 6517 na NODE_68_length_5925_cov_34.1031 unplaced-scaffold na na NCXP01000068.1 = NZ_NCXP01000068.1 Primary Assembly 5925 na NODE_69_length_5361_cov_40.3844 unplaced-scaffold na na NCXP01000069.1 = NZ_NCXP01000069.1 Primary Assembly 5361 na NODE_70_length_5076_cov_43.918 unplaced-scaffold na na NCXP01000070.1 = NZ_NCXP01000070.1 Primary Assembly 5076 na NODE_71_length_4926_cov_47.875 unplaced-scaffold na na NCXP01000071.1 = NZ_NCXP01000071.1 Primary Assembly 4926 na NODE_72_length_4280_cov_31.8727 unplaced-scaffold na na NCXP01000072.1 = NZ_NCXP01000072.1 Primary Assembly 4280 na NODE_73_length_3846_cov_46.6002 unplaced-scaffold na na NCXP01000073.1 = NZ_NCXP01000073.1 Primary Assembly 3846 na NODE_74_length_3834_cov_38.395 unplaced-scaffold na na NCXP01000074.1 = NZ_NCXP01000074.1 Primary Assembly 3834 na NODE_75_length_3293_cov_41.7083 unplaced-scaffold na na NCXP01000075.1 = NZ_NCXP01000075.1 Primary Assembly 3293 na NODE_76_length_3005_cov_37.9105 unplaced-scaffold na na NCXP01000076.1 = NZ_NCXP01000076.1 Primary Assembly 3005 na NODE_77_length_2780_cov_38.8857 unplaced-scaffold na na NCXP01000077.1 = NZ_NCXP01000077.1 Primary Assembly 2780 na NODE_78_length_2236_cov_47.1172 unplaced-scaffold na na NCXP01000078.1 = NZ_NCXP01000078.1 Primary Assembly 2236 na NODE_79_length_2035_cov_64.8223 unplaced-scaffold na na NCXP01000079.1 = NZ_NCXP01000079.1 Primary Assembly 2035 na NODE_80_length_1775_cov_125.683 unplaced-scaffold na na NCXP01000080.1 = NZ_NCXP01000080.1 Primary Assembly 1775 na NODE_81_length_1662_cov_85.6637 unplaced-scaffold na na NCXP01000081.1 = NZ_NCXP01000081.1 Primary Assembly 1662 na NODE_82_length_1634_cov_127.447 unplaced-scaffold na na NCXP01000082.1 = NZ_NCXP01000082.1 Primary Assembly 1634 na NODE_83_length_1599_cov_52.3857 unplaced-scaffold na na NCXP01000083.1 = NZ_NCXP01000083.1 Primary Assembly 1599 na NODE_84_length_1583_cov_24.49 unplaced-scaffold na na NCXP01000084.1 = NZ_NCXP01000084.1 Primary Assembly 1583 na NODE_85_length_1555_cov_21.4249 unplaced-scaffold na na NCXP01000085.1 = NZ_NCXP01000085.1 Primary Assembly 1555 na NODE_86_length_1392_cov_42.27 unplaced-scaffold na na NCXP01000086.1 = NZ_NCXP01000086.1 Primary Assembly 1392 na NODE_87_length_1364_cov_37.5897 unplaced-scaffold na na NCXP01000087.1 = NZ_NCXP01000087.1 Primary Assembly 1364 na NODE_88_length_1343_cov_39.6445 unplaced-scaffold na na NCXP01000088.1 = NZ_NCXP01000088.1 Primary Assembly 1343 na NODE_89_length_1252_cov_47.0085 unplaced-scaffold na na NCXP01000089.1 = NZ_NCXP01000089.1 Primary Assembly 1252 na NODE_90_length_1218_cov_37.4575 unplaced-scaffold na na NCXP01000090.1 = NZ_NCXP01000090.1 Primary Assembly 1218 na NODE_91_length_1211_cov_45.7372 unplaced-scaffold na na NCXP01000091.1 = NZ_NCXP01000091.1 Primary Assembly 1211 na NODE_92_length_1197_cov_88.7232 unplaced-scaffold na na NCXP01000092.1 = NZ_NCXP01000092.1 Primary Assembly 1197 na NODE_93_length_1159_cov_40.1248 unplaced-scaffold na na NCXP01000093.1 = NZ_NCXP01000093.1 Primary Assembly 1159 na NODE_94_length_1027_cov_7.47474 unplaced-scaffold na na NCXP01000094.1 = NZ_NCXP01000094.1 Primary Assembly 1027 na NODE_95_length_1021_cov_91.6335 unplaced-scaffold na na NCXP01000095.1 = NZ_NCXP01000095.1 Primary Assembly 1021 na NODE_96_length_1010_cov_28.7235 unplaced-scaffold na na NCXP01000096.1 = NZ_NCXP01000096.1 Primary Assembly 1010 na NODE_97_length_986_cov_30.3542 unplaced-scaffold na na NCXP01000097.1 = NZ_NCXP01000097.1 Primary Assembly 986 na NODE_98_length_946_cov_106.956 unplaced-scaffold na na NCXP01000098.1 = NZ_NCXP01000098.1 Primary Assembly 946 na NODE_99_length_915_cov_89.3556 unplaced-scaffold na na NCXP01000099.1 = NZ_NCXP01000099.1 Primary Assembly 915 na NODE_100_length_894_cov_19.0539 unplaced-scaffold na na NCXP01000100.1 = NZ_NCXP01000100.1 Primary Assembly 894 na NODE_101_length_863_cov_35.3728 unplaced-scaffold na na NCXP01000101.1 = NZ_NCXP01000101.1 Primary Assembly 863 na NODE_102_length_851_cov_102.092 unplaced-scaffold na na NCXP01000102.1 = NZ_NCXP01000102.1 Primary Assembly 851 na NODE_103_length_833_cov_126.718 unplaced-scaffold na na NCXP01000103.1 = NZ_NCXP01000103.1 Primary Assembly 833 na NODE_104_length_807_cov_76.2808 unplaced-scaffold na na NCXP01000104.1 = NZ_NCXP01000104.1 Primary Assembly 807 na NODE_105_length_789_cov_79.3666 unplaced-scaffold na na NCXP01000105.1 = NZ_NCXP01000105.1 Primary Assembly 789 na NODE_106_length_757_cov_3.32647 unplaced-scaffold na na NCXP01000106.1 = NZ_NCXP01000106.1 Primary Assembly 757 na NODE_107_length_749_cov_19.7708 unplaced-scaffold na na NCXP01000107.1 = NZ_NCXP01000107.1 Primary Assembly 749 na NODE_108_length_704_cov_112.211 unplaced-scaffold na na NCXP01000108.1 = NZ_NCXP01000108.1 Primary Assembly 704 na NODE_109_length_681_cov_40.8063 unplaced-scaffold na na NCXP01000109.1 = NZ_NCXP01000109.1 Primary Assembly 681 na NODE_110_length_647_cov_49.3649 unplaced-scaffold na na NCXP01000110.1 = NZ_NCXP01000110.1 Primary Assembly 647 na NODE_111_length_609_cov_21.6974 unplaced-scaffold na na NCXP01000111.1 = NZ_NCXP01000111.1 Primary Assembly 609 na NODE_112_length_596_cov_27.0867 unplaced-scaffold na na NCXP01000112.1 = NZ_NCXP01000112.1 Primary Assembly 596 na NODE_113_length_596_cov_39.3256 unplaced-scaffold na na NCXP01000113.1 = NZ_NCXP01000113.1 Primary Assembly 596 na NODE_114_length_593_cov_29.281 unplaced-scaffold na na NCXP01000114.1 = NZ_NCXP01000114.1 Primary Assembly 593 na NODE_115_length_578_cov_28.3673 unplaced-scaffold na na NCXP01000115.1 = NZ_NCXP01000115.1 Primary Assembly 578 na NODE_116_length_572_cov_29.9778 unplaced-scaffold na na NCXP01000116.1 = NZ_NCXP01000116.1 Primary Assembly 572 na NODE_117_length_475_cov_2.15578 unplaced-scaffold na na NCXP01000117.1 = NZ_NCXP01000117.1 Primary Assembly 475 na NODE_118_length_458_cov_34.727 unplaced-scaffold na na NCXP01000118.1 = NZ_NCXP01000118.1 Primary Assembly 458 na NODE_119_length_447_cov_41.3676 unplaced-scaffold na na NCXP01000119.1 = NZ_NCXP01000119.1 Primary Assembly 447 na NODE_120_length_446_cov_3.12737 unplaced-scaffold na na NCXP01000120.1 = NZ_NCXP01000120.1 Primary Assembly 446 na NODE_121_length_422_cov_32.4406 unplaced-scaffold na na NCXP01000121.1 = NZ_NCXP01000121.1 Primary Assembly 422 na NODE_122_length_420_cov_46.1487 unplaced-scaffold na na NCXP01000122.1 = NZ_NCXP01000122.1 Primary Assembly 420 na NODE_123_length_412_cov_29.3045 unplaced-scaffold na na NCXP01000123.1 = NZ_NCXP01000123.1 Primary Assembly 412 na NODE_124_length_409_cov_1.5241 unplaced-scaffold na na NCXP01000124.1 = NZ_NCXP01000124.1 Primary Assembly 409 na NODE_125_length_367_cov_59.3931 unplaced-scaffold na na NCXP01000125.1 = NZ_NCXP01000125.1 Primary Assembly 367 na NODE_126_length_362_cov_44.593 unplaced-scaffold na na NCXP01000126.1 = NZ_NCXP01000126.1 Primary Assembly 362 na NODE_127_length_359_cov_5.10638 unplaced-scaffold na na NCXP01000127.1 = NZ_NCXP01000127.1 Primary Assembly 359 na NODE_128_length_351_cov_2.14964 unplaced-scaffold na na NCXP01000128.1 = NZ_NCXP01000128.1 Primary Assembly 351 na NODE_129_length_347_cov_1.52963 unplaced-scaffold na na NCXP01000129.1 = NZ_NCXP01000129.1 Primary Assembly 347 na NODE_130_length_330_cov_78.4387 unplaced-scaffold na na NCXP01000130.1 = NZ_NCXP01000130.1 Primary Assembly 330 na NODE_131_length_329_cov_18.9206 unplaced-scaffold na na NCXP01000131.1 = NZ_NCXP01000131.1 Primary Assembly 329 na NODE_132_length_327_cov_17.628 unplaced-scaffold na na NCXP01000132.1 = NZ_NCXP01000132.1 Primary Assembly 327 na NODE_133_length_324_cov_1.19838 unplaced-scaffold na na NCXP01000133.1 = NZ_NCXP01000133.1 Primary Assembly 324 na NODE_134_length_322_cov_43.9551 unplaced-scaffold na na NCXP01000134.1 = NZ_NCXP01000134.1 Primary Assembly 322 na NODE_135_length_318_cov_42.5104 unplaced-scaffold na na NCXP01000135.1 = NZ_NCXP01000135.1 Primary Assembly 318 na NODE_136_length_317_cov_89.475 unplaced-scaffold na na NCXP01000136.1 = NZ_NCXP01000136.1 Primary Assembly 317 na NODE_137_length_316_cov_41.4728 unplaced-scaffold na na NCXP01000137.1 = NZ_NCXP01000137.1 Primary Assembly 316 na NODE_138_length_278_cov_2.14428 unplaced-scaffold na na NCXP01000138.1 = NZ_NCXP01000138.1 Primary Assembly 278 na NODE_139_length_250_cov_1.98844 unplaced-scaffold na na NCXP01000139.1 = NZ_NCXP01000139.1 Primary Assembly 250 na NODE_140_length_234_cov_1.3949 unplaced-scaffold na na NCXP01000140.1 = NZ_NCXP01000140.1 Primary Assembly 234 na NODE_141_length_220_cov_44.1678 unplaced-scaffold na na NCXP01000141.1 = NZ_NCXP01000141.1 Primary Assembly 220 na NODE_142_length_202_cov_33.856 unplaced-scaffold na na NCXP01000142.1 = NZ_NCXP01000142.1 Primary Assembly 202 na