# Assembly name: ASM211663v1 # Organism name: Mycobacterium szulgai (high G+C Gram-positive bacteria) # Infraspecific name: strain=DSM 44166 # Taxid: 1787 # BioSample: SAMN04216953 # BioProject: PRJNA299467 # Submitter: University of Trento # Date: 2017-04-20 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: LQPW01 # Assembly method: Spades v. 3.5.0 # Expected final version: yes # Genome coverage: 122x # Sequencing technology: Illumina HiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_002116635.1 # RefSeq assembly accession: GCF_002116635.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_002116645.1 GCF_002116645.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name contig_1 unplaced-scaffold na na LQPW01000001.1 = NZ_LQPW01000001.1 Primary Assembly 23419 na contig_10 unplaced-scaffold na na LQPW01000002.1 = NZ_LQPW01000002.1 Primary Assembly 1329 na contig_100 unplaced-scaffold na na LQPW01000003.1 = NZ_LQPW01000003.1 Primary Assembly 7409 na contig_101 unplaced-scaffold na na LQPW01000004.1 = NZ_LQPW01000004.1 Primary Assembly 4723 na contig_102 unplaced-scaffold na na LQPW01000005.1 = NZ_LQPW01000005.1 Primary Assembly 272809 na contig_103 unplaced-scaffold na na LQPW01000006.1 = NZ_LQPW01000006.1 Primary Assembly 1528 na contig_104 unplaced-scaffold na na LQPW01000007.1 = NZ_LQPW01000007.1 Primary Assembly 77210 na contig_105 unplaced-scaffold na na LQPW01000008.1 = NZ_LQPW01000008.1 Primary Assembly 50315 na contig_106 unplaced-scaffold na na LQPW01000009.1 = NZ_LQPW01000009.1 Primary Assembly 18077 na contig_107 unplaced-scaffold na na LQPW01000010.1 = NZ_LQPW01000010.1 Primary Assembly 151962 na contig_108 unplaced-scaffold na na LQPW01000011.1 = NZ_LQPW01000011.1 Primary Assembly 15758 na contig_109 unplaced-scaffold na na LQPW01000012.1 = NZ_LQPW01000012.1 Primary Assembly 29142 na contig_11 unplaced-scaffold na na LQPW01000013.1 = NZ_LQPW01000013.1 Primary Assembly 128628 na contig_110 unplaced-scaffold na na LQPW01000014.1 = NZ_LQPW01000014.1 Primary Assembly 11656 na contig_111 unplaced-scaffold na na LQPW01000015.1 = NZ_LQPW01000015.1 Primary Assembly 38633 na contig_112 unplaced-scaffold na na LQPW01000016.1 = NZ_LQPW01000016.1 Primary Assembly 104816 na contig_113 unplaced-scaffold na na LQPW01000017.1 = NZ_LQPW01000017.1 Primary Assembly 69157 na contig_114 unplaced-scaffold na na LQPW01000018.1 = NZ_LQPW01000018.1 Primary Assembly 1751 na contig_115 unplaced-scaffold na na LQPW01000019.1 = NZ_LQPW01000019.1 Primary Assembly 295676 na contig_116 unplaced-scaffold na na LQPW01000020.1 = NZ_LQPW01000020.1 Primary Assembly 2817 na contig_117 unplaced-scaffold na na LQPW01000021.1 = NZ_LQPW01000021.1 Primary Assembly 13751 na contig_118 unplaced-scaffold na na LQPW01000022.1 = NZ_LQPW01000022.1 Primary Assembly 96322 na contig_119 unplaced-scaffold na na LQPW01000023.1 = NZ_LQPW01000023.1 Primary Assembly 37907 na contig_12 unplaced-scaffold na na LQPW01000024.1 = NZ_LQPW01000024.1 Primary Assembly 1363 na contig_120 unplaced-scaffold na na LQPW01000025.1 = NZ_LQPW01000025.1 Primary Assembly 2952 na contig_121 unplaced-scaffold na na LQPW01000026.1 = NZ_LQPW01000026.1 Primary Assembly 1536 na contig_122 unplaced-scaffold na na LQPW01000027.1 = NZ_LQPW01000027.1 Primary Assembly 25406 na contig_123 unplaced-scaffold na na LQPW01000028.1 = NZ_LQPW01000028.1 Primary Assembly 24602 na contig_124 unplaced-scaffold na na LQPW01000029.1 = NZ_LQPW01000029.1 Primary Assembly 60818 na contig_125 unplaced-scaffold na na LQPW01000030.1 = NZ_LQPW01000030.1 Primary Assembly 2065 na contig_126 unplaced-scaffold na na LQPW01000031.1 = NZ_LQPW01000031.1 Primary Assembly 296906 na contig_127 unplaced-scaffold na na LQPW01000032.1 = NZ_LQPW01000032.1 Primary Assembly 22584 na contig_128 unplaced-scaffold na na LQPW01000033.1 = NZ_LQPW01000033.1 Primary Assembly 1446 na contig_129 unplaced-scaffold na na LQPW01000034.1 = NZ_LQPW01000034.1 Primary Assembly 13698 na contig_13 unplaced-scaffold na na LQPW01000035.1 = NZ_LQPW01000035.1 Primary Assembly 1455 na contig_130 unplaced-scaffold na na LQPW01000036.1 = NZ_LQPW01000036.1 Primary Assembly 8700 na contig_131 unplaced-scaffold na na LQPW01000037.1 = NZ_LQPW01000037.1 Primary Assembly 4341 na contig_132 unplaced-scaffold na na LQPW01000038.1 = NZ_LQPW01000038.1 Primary Assembly 6704 na contig_133 unplaced-scaffold na na LQPW01000039.1 = NZ_LQPW01000039.1 Primary Assembly 179759 na contig_134 unplaced-scaffold na na LQPW01000040.1 = NZ_LQPW01000040.1 Primary Assembly 15959 na contig_135 unplaced-scaffold na na LQPW01000041.1 = NZ_LQPW01000041.1 Primary Assembly 15544 na contig_136 unplaced-scaffold na na LQPW01000042.1 = NZ_LQPW01000042.1 Primary Assembly 13040 na contig_137 unplaced-scaffold na na LQPW01000043.1 = NZ_LQPW01000043.1 Primary Assembly 1022 na contig_138 unplaced-scaffold na na LQPW01000044.1 = NZ_LQPW01000044.1 Primary Assembly 8170 na contig_139 unplaced-scaffold na na LQPW01000045.1 = NZ_LQPW01000045.1 Primary Assembly 10063 na contig_14 unplaced-scaffold na na LQPW01000046.1 = NZ_LQPW01000046.1 Primary Assembly 1513 na contig_140 unplaced-scaffold na na LQPW01000047.1 = NZ_LQPW01000047.1 Primary Assembly 6255 na contig_141 unplaced-scaffold na na LQPW01000048.1 = NZ_LQPW01000048.1 Primary Assembly 89837 na contig_142 unplaced-scaffold na na LQPW01000049.1 = NZ_LQPW01000049.1 Primary Assembly 93971 na contig_143 unplaced-scaffold na na LQPW01000050.1 = NZ_LQPW01000050.1 Primary Assembly 10601 na contig_144 unplaced-scaffold na na LQPW01000051.1 = NZ_LQPW01000051.1 Primary Assembly 6146 na contig_145 unplaced-scaffold na na LQPW01000052.1 = NZ_LQPW01000052.1 Primary Assembly 1257 na contig_146 unplaced-scaffold na na LQPW01000053.1 = NZ_LQPW01000053.1 Primary Assembly 1749 na contig_147 unplaced-scaffold na na LQPW01000054.1 = NZ_LQPW01000054.1 Primary Assembly 81414 na contig_148 unplaced-scaffold na na LQPW01000055.1 = NZ_LQPW01000055.1 Primary Assembly 6066 na contig_149 unplaced-scaffold na na LQPW01000056.1 = NZ_LQPW01000056.1 Primary Assembly 1064 na contig_15 unplaced-scaffold na na LQPW01000057.1 = NZ_LQPW01000057.1 Primary Assembly 12030 na contig_150 unplaced-scaffold na na LQPW01000058.1 = NZ_LQPW01000058.1 Primary Assembly 1896 na contig_151 unplaced-scaffold na na LQPW01000059.1 = NZ_LQPW01000059.1 Primary Assembly 1037 na contig_152 unplaced-scaffold na na LQPW01000060.1 = NZ_LQPW01000060.1 Primary Assembly 1944 na contig_153 unplaced-scaffold na na LQPW01000061.1 = NZ_LQPW01000061.1 Primary Assembly 1754 na contig_154 unplaced-scaffold na na LQPW01000062.1 = NZ_LQPW01000062.1 Primary Assembly 47929 na contig_155 unplaced-scaffold na na LQPW01000063.1 = NZ_LQPW01000063.1 Primary Assembly 8325 na contig_156 unplaced-scaffold na na LQPW01000064.1 = NZ_LQPW01000064.1 Primary Assembly 35563 na contig_157 unplaced-scaffold na na LQPW01000065.1 = NZ_LQPW01000065.1 Primary Assembly 23102 na contig_158 unplaced-scaffold na na LQPW01000066.1 = NZ_LQPW01000066.1 Primary Assembly 1029 na contig_159 unplaced-scaffold na na LQPW01000067.1 = NZ_LQPW01000067.1 Primary Assembly 33455 na contig_16 unplaced-scaffold na na LQPW01000068.1 = NZ_LQPW01000068.1 Primary Assembly 1040 na contig_160 unplaced-scaffold na na LQPW01000069.1 = NZ_LQPW01000069.1 Primary Assembly 24062 na contig_161 unplaced-scaffold na na LQPW01000070.1 = NZ_LQPW01000070.1 Primary Assembly 5907 na contig_162 unplaced-scaffold na na LQPW01000071.1 = NZ_LQPW01000071.1 Primary Assembly 9311 na contig_163 unplaced-scaffold na na LQPW01000072.1 = NZ_LQPW01000072.1 Primary Assembly 39118 na contig_164 unplaced-scaffold na na LQPW01000073.1 = NZ_LQPW01000073.1 Primary Assembly 2878 na contig_165 unplaced-scaffold na na LQPW01000074.1 = NZ_LQPW01000074.1 Primary Assembly 10944 na contig_166 unplaced-scaffold na na LQPW01000075.1 = NZ_LQPW01000075.1 Primary Assembly 59208 na contig_167 unplaced-scaffold na na LQPW01000076.1 = NZ_LQPW01000076.1 Primary Assembly 28910 na contig_168 unplaced-scaffold na na LQPW01000077.1 = NZ_LQPW01000077.1 Primary Assembly 2776 na contig_169 unplaced-scaffold na na LQPW01000078.1 = NZ_LQPW01000078.1 Primary Assembly 1414 na contig_17 unplaced-scaffold na na LQPW01000079.1 = NZ_LQPW01000079.1 Primary Assembly 1547 na contig_170 unplaced-scaffold na na LQPW01000080.1 = NZ_LQPW01000080.1 Primary Assembly 1751 na contig_171 unplaced-scaffold na na LQPW01000081.1 = NZ_LQPW01000081.1 Primary Assembly 11212 na contig_172 unplaced-scaffold na na LQPW01000082.1 = NZ_LQPW01000082.1 Primary Assembly 90113 na contig_173 unplaced-scaffold na na LQPW01000083.1 = NZ_LQPW01000083.1 Primary Assembly 12573 na contig_174 unplaced-scaffold na na LQPW01000084.1 = NZ_LQPW01000084.1 Primary Assembly 7144 na contig_175 unplaced-scaffold na na LQPW01000085.1 = NZ_LQPW01000085.1 Primary Assembly 1997 na contig_176 unplaced-scaffold na na LQPW01000086.1 = NZ_LQPW01000086.1 Primary Assembly 150381 na contig_177 unplaced-scaffold na na LQPW01000087.1 = NZ_LQPW01000087.1 Primary Assembly 1016 na contig_178 unplaced-scaffold na na LQPW01000088.1 = NZ_LQPW01000088.1 Primary Assembly 19066 na contig_18 unplaced-scaffold na na LQPW01000089.1 = NZ_LQPW01000089.1 Primary Assembly 1697 na contig_19 unplaced-scaffold na na LQPW01000090.1 = NZ_LQPW01000090.1 Primary Assembly 36481 na contig_2 unplaced-scaffold na na LQPW01000091.1 = NZ_LQPW01000091.1 Primary Assembly 76141 na contig_20 unplaced-scaffold na na LQPW01000092.1 = NZ_LQPW01000092.1 Primary Assembly 1772 na contig_21 unplaced-scaffold na na LQPW01000093.1 = NZ_LQPW01000093.1 Primary Assembly 2083 na contig_22 unplaced-scaffold na na LQPW01000094.1 = NZ_LQPW01000094.1 Primary Assembly 2257 na contig_23 unplaced-scaffold na na LQPW01000095.1 = NZ_LQPW01000095.1 Primary Assembly 2432 na contig_24 unplaced-scaffold na na LQPW01000096.1 = NZ_LQPW01000096.1 Primary Assembly 2715 na contig_25 unplaced-scaffold na na LQPW01000097.1 = NZ_LQPW01000097.1 Primary Assembly 1449 na contig_26 unplaced-scaffold na na LQPW01000098.1 = NZ_LQPW01000098.1 Primary Assembly 2767 na contig_27 unplaced-scaffold na na LQPW01000099.1 = NZ_LQPW01000099.1 Primary Assembly 3187 na contig_28 unplaced-scaffold na na LQPW01000100.1 = NZ_LQPW01000100.1 Primary Assembly 3308 na contig_29 unplaced-scaffold na na LQPW01000101.1 = NZ_LQPW01000101.1 Primary Assembly 1885 na contig_3 unplaced-scaffold na na LQPW01000102.1 = NZ_LQPW01000102.1 Primary Assembly 1076 na contig_30 unplaced-scaffold na na LQPW01000103.1 = NZ_LQPW01000103.1 Primary Assembly 4646 na contig_31 unplaced-scaffold na na LQPW01000104.1 = NZ_LQPW01000104.1 Primary Assembly 19906 na contig_32 unplaced-scaffold na na LQPW01000105.1 = NZ_LQPW01000105.1 Primary Assembly 1119 na contig_33 unplaced-scaffold na na LQPW01000106.1 = NZ_LQPW01000106.1 Primary Assembly 60670 na contig_34 unplaced-scaffold na na LQPW01000107.1 = NZ_LQPW01000107.1 Primary Assembly 89016 na contig_35 unplaced-scaffold na na LQPW01000108.1 = NZ_LQPW01000108.1 Primary Assembly 1543 na contig_36 unplaced-scaffold na na LQPW01000109.1 = NZ_LQPW01000109.1 Primary Assembly 49509 na contig_37 unplaced-scaffold na na LQPW01000110.1 = NZ_LQPW01000110.1 Primary Assembly 43796 na contig_38 unplaced-scaffold na na LQPW01000111.1 = NZ_LQPW01000111.1 Primary Assembly 2173 na contig_39 unplaced-scaffold na na LQPW01000112.1 = NZ_LQPW01000112.1 Primary Assembly 13815 na contig_4 unplaced-scaffold na na LQPW01000113.1 = NZ_LQPW01000113.1 Primary Assembly 1086 na contig_40 unplaced-scaffold na na LQPW01000114.1 = NZ_LQPW01000114.1 Primary Assembly 1074 na contig_41 unplaced-scaffold na na LQPW01000115.1 = NZ_LQPW01000115.1 Primary Assembly 12746 na contig_42 unplaced-scaffold na na LQPW01000116.1 = NZ_LQPW01000116.1 Primary Assembly 10285 na contig_43 unplaced-scaffold na na LQPW01000117.1 = NZ_LQPW01000117.1 Primary Assembly 1768 na contig_44 unplaced-scaffold na na LQPW01000118.1 = NZ_LQPW01000118.1 Primary Assembly 2129 na contig_45 unplaced-scaffold na na LQPW01000119.1 = NZ_LQPW01000119.1 Primary Assembly 26822 na contig_46 unplaced-scaffold na na LQPW01000120.1 = NZ_LQPW01000120.1 Primary Assembly 195064 na contig_47 unplaced-scaffold na na LQPW01000121.1 = NZ_LQPW01000121.1 Primary Assembly 1182 na contig_48 unplaced-scaffold na na LQPW01000122.1 = NZ_LQPW01000122.1 Primary Assembly 18630 na contig_49 unplaced-scaffold na na LQPW01000123.1 = NZ_LQPW01000123.1 Primary Assembly 67747 na contig_5 unplaced-scaffold na na LQPW01000124.1 = NZ_LQPW01000124.1 Primary Assembly 1194 na contig_50 unplaced-scaffold na na LQPW01000125.1 = NZ_LQPW01000125.1 Primary Assembly 112975 na contig_51 unplaced-scaffold na na LQPW01000126.1 = NZ_LQPW01000126.1 Primary Assembly 9708 na contig_52 unplaced-scaffold na na LQPW01000127.1 = NZ_LQPW01000127.1 Primary Assembly 1213 na contig_53 unplaced-scaffold na na LQPW01000128.1 = NZ_LQPW01000128.1 Primary Assembly 1006 na contig_54 unplaced-scaffold na na LQPW01000129.1 = NZ_LQPW01000129.1 Primary Assembly 3471 na contig_55 unplaced-scaffold na na LQPW01000130.1 = NZ_LQPW01000130.1 Primary Assembly 6944 na contig_56 unplaced-scaffold na na LQPW01000131.1 = NZ_LQPW01000131.1 Primary Assembly 46001 na contig_57 unplaced-scaffold na na LQPW01000132.1 = NZ_LQPW01000132.1 Primary Assembly 131019 na contig_58 unplaced-scaffold na na LQPW01000133.1 = NZ_LQPW01000133.1 Primary Assembly 1661 na contig_59 unplaced-scaffold na na LQPW01000134.1 = NZ_LQPW01000134.1 Primary Assembly 105844 na contig_6 unplaced-scaffold na na LQPW01000135.1 = NZ_LQPW01000135.1 Primary Assembly 1208 na contig_60 unplaced-scaffold na na LQPW01000136.1 = NZ_LQPW01000136.1 Primary Assembly 57920 na contig_61 unplaced-scaffold na na LQPW01000137.1 = NZ_LQPW01000137.1 Primary Assembly 59984 na contig_62 unplaced-scaffold na na LQPW01000138.1 = NZ_LQPW01000138.1 Primary Assembly 15163 na contig_63 unplaced-scaffold na na LQPW01000139.1 = NZ_LQPW01000139.1 Primary Assembly 1061 na contig_64 unplaced-scaffold na na LQPW01000140.1 = NZ_LQPW01000140.1 Primary Assembly 78605 na contig_65 unplaced-scaffold na na LQPW01000141.1 = NZ_LQPW01000141.1 Primary Assembly 1191 na contig_66 unplaced-scaffold na na LQPW01000142.1 = NZ_LQPW01000142.1 Primary Assembly 1023 na contig_67 unplaced-scaffold na na LQPW01000143.1 = NZ_LQPW01000143.1 Primary Assembly 80536 na contig_68 unplaced-scaffold na na LQPW01000144.1 = NZ_LQPW01000144.1 Primary Assembly 81625 na contig_69 unplaced-scaffold na na LQPW01000145.1 = NZ_LQPW01000145.1 Primary Assembly 84706 na contig_7 unplaced-scaffold na na LQPW01000146.1 = NZ_LQPW01000146.1 Primary Assembly 68528 na contig_70 unplaced-scaffold na na LQPW01000147.1 = NZ_LQPW01000147.1 Primary Assembly 5213 na contig_71 unplaced-scaffold na na LQPW01000148.1 = NZ_LQPW01000148.1 Primary Assembly 129957 na contig_72 unplaced-scaffold na na LQPW01000149.1 = NZ_LQPW01000149.1 Primary Assembly 1951 na contig_73 unplaced-scaffold na na LQPW01000150.1 = NZ_LQPW01000150.1 Primary Assembly 76168 na contig_74 unplaced-scaffold na na LQPW01000151.1 = NZ_LQPW01000151.1 Primary Assembly 30501 na contig_75 unplaced-scaffold na na LQPW01000152.1 = NZ_LQPW01000152.1 Primary Assembly 50495 na contig_76 unplaced-scaffold na na LQPW01000153.1 = NZ_LQPW01000153.1 Primary Assembly 45511 na contig_77 unplaced-scaffold na na LQPW01000154.1 = NZ_LQPW01000154.1 Primary Assembly 85725 na contig_78 unplaced-scaffold na na LQPW01000155.1 = NZ_LQPW01000155.1 Primary Assembly 17282 na contig_79 unplaced-scaffold na na LQPW01000156.1 = NZ_LQPW01000156.1 Primary Assembly 71434 na contig_8 unplaced-scaffold na na LQPW01000157.1 = NZ_LQPW01000157.1 Primary Assembly 1259 na contig_80 unplaced-scaffold na na LQPW01000158.1 = NZ_LQPW01000158.1 Primary Assembly 57621 na contig_81 unplaced-scaffold na na LQPW01000159.1 = NZ_LQPW01000159.1 Primary Assembly 2884 na contig_82 unplaced-scaffold na na LQPW01000160.1 = NZ_LQPW01000160.1 Primary Assembly 19584 na contig_83 unplaced-scaffold na na LQPW01000161.1 = NZ_LQPW01000161.1 Primary Assembly 1525 na contig_84 unplaced-scaffold na na LQPW01000162.1 = NZ_LQPW01000162.1 Primary Assembly 13211 na contig_85 unplaced-scaffold na na LQPW01000163.1 = NZ_LQPW01000163.1 Primary Assembly 109568 na contig_86 unplaced-scaffold na na LQPW01000164.1 = NZ_LQPW01000164.1 Primary Assembly 4470 na contig_87 unplaced-scaffold na na LQPW01000165.1 = NZ_LQPW01000165.1 Primary Assembly 218914 na contig_88 unplaced-scaffold na na LQPW01000166.1 = NZ_LQPW01000166.1 Primary Assembly 9299 na contig_89 unplaced-scaffold na na LQPW01000167.1 = NZ_LQPW01000167.1 Primary Assembly 200206 na contig_9 unplaced-scaffold na na LQPW01000168.1 = NZ_LQPW01000168.1 Primary Assembly 35417 na contig_90 unplaced-scaffold na na LQPW01000169.1 = NZ_LQPW01000169.1 Primary Assembly 1422 na contig_91 unplaced-scaffold na na LQPW01000170.1 = NZ_LQPW01000170.1 Primary Assembly 1040 na contig_92 unplaced-scaffold na na LQPW01000171.1 = NZ_LQPW01000171.1 Primary Assembly 103006 na contig_93 unplaced-scaffold na na LQPW01000172.1 = NZ_LQPW01000172.1 Primary Assembly 12499 na contig_94 unplaced-scaffold na na LQPW01000173.1 = NZ_LQPW01000173.1 Primary Assembly 95710 na contig_95 unplaced-scaffold na na LQPW01000174.1 = NZ_LQPW01000174.1 Primary Assembly 76494 na contig_96 unplaced-scaffold na na LQPW01000175.1 = NZ_LQPW01000175.1 Primary Assembly 1128 na contig_97 unplaced-scaffold na na LQPW01000176.1 = NZ_LQPW01000176.1 Primary Assembly 165765 na contig_98 unplaced-scaffold na na LQPW01000177.1 = NZ_LQPW01000177.1 Primary Assembly 26598 na contig_99 unplaced-scaffold na na LQPW01000178.1 = NZ_LQPW01000178.1 Primary Assembly 161007 na