# Assembly name: ASM221792v1 # Organism name: Secundilactobacillus mixtipabuli (firmicutes) # Infraspecific name: strain=IWT30 # Taxid: 1435342 # BioSample: SAMD00042395 # BioProject: PRJDB4275 # Submitter: NARO Institute of Livestock and Grassland Science # Date: 2017-06-14 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: BCMF01 # Assembly method: Platanus v. 1.2.4 # Genome coverage: 350X # Sequencing technology: Illumina MiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_002217925.1 # RefSeq assembly accession: GCF_002217925.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_002217935.1 GCF_002217935.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name BCMF01000001.1 unplaced-scaffold na na BCMF01000001.1 = NZ_BCMF01000001.1 Primary Assembly 314740 na BCMF01000002.1 unplaced-scaffold na na BCMF01000002.1 = NZ_BCMF01000002.1 Primary Assembly 298328 na BCMF01000003.1 unplaced-scaffold na na BCMF01000003.1 = NZ_BCMF01000003.1 Primary Assembly 277335 na BCMF01000004.1 unplaced-scaffold na na BCMF01000004.1 = NZ_BCMF01000004.1 Primary Assembly 274675 na BCMF01000005.1 unplaced-scaffold na na BCMF01000005.1 = NZ_BCMF01000005.1 Primary Assembly 254329 na BCMF01000006.1 unplaced-scaffold na na BCMF01000006.1 = NZ_BCMF01000006.1 Primary Assembly 244861 na BCMF01000007.1 unplaced-scaffold na na BCMF01000007.1 = NZ_BCMF01000007.1 Primary Assembly 164316 na BCMF01000008.1 unplaced-scaffold na na BCMF01000008.1 = NZ_BCMF01000008.1 Primary Assembly 128071 na BCMF01000009.1 unplaced-scaffold na na BCMF01000009.1 = NZ_BCMF01000009.1 Primary Assembly 109575 na BCMF01000010.1 unplaced-scaffold na na BCMF01000010.1 = NZ_BCMF01000010.1 Primary Assembly 102115 na BCMF01000011.1 unplaced-scaffold na na BCMF01000011.1 = NZ_BCMF01000011.1 Primary Assembly 93481 na BCMF01000012.1 unplaced-scaffold na na BCMF01000012.1 = NZ_BCMF01000012.1 Primary Assembly 67408 na BCMF01000013.1 unplaced-scaffold na na BCMF01000013.1 = NZ_BCMF01000013.1 Primary Assembly 40696 na BCMF01000014.1 unplaced-scaffold na na BCMF01000014.1 = NZ_BCMF01000014.1 Primary Assembly 35784 na BCMF01000015.1 unplaced-scaffold na na BCMF01000015.1 = NZ_BCMF01000015.1 Primary Assembly 26025 na BCMF01000016.1 unplaced-scaffold na na BCMF01000016.1 = NZ_BCMF01000016.1 Primary Assembly 20000 na BCMF01000017.1 unplaced-scaffold na na BCMF01000017.1 = NZ_BCMF01000017.1 Primary Assembly 13458 na BCMF01000018.1 unplaced-scaffold na na BCMF01000018.1 = NZ_BCMF01000018.1 Primary Assembly 12234 na BCMF01000019.1 unplaced-scaffold na na BCMF01000019.1 = NZ_BCMF01000019.1 Primary Assembly 12000 na BCMF01000020.1 unplaced-scaffold na na BCMF01000020.1 = NZ_BCMF01000020.1 Primary Assembly 2129 na BCMF01000021.1 unplaced-scaffold na na BCMF01000021.1 = NZ_BCMF01000021.1 Primary Assembly 1031 na BCMF01000022.1 unplaced-scaffold na na BCMF01000022.1 = NZ_BCMF01000022.1 Primary Assembly 892 na BCMF01000023.1 unplaced-scaffold na na BCMF01000023.1 = NZ_BCMF01000023.1 Primary Assembly 682 na BCMF01000024.1 unplaced-scaffold na na BCMF01000024.1 = NZ_BCMF01000024.1 Primary Assembly 617 na BCMF01000025.1 unplaced-scaffold na na BCMF01000025.1 = NZ_BCMF01000025.1 Primary Assembly 529 na BCMF01000026.1 unplaced-scaffold na na BCMF01000026.1 = NZ_BCMF01000026.1 Primary Assembly 519 na BCMF01000027.1 unplaced-scaffold na na BCMF01000027.1 = NZ_BCMF01000027.1 Primary Assembly 328 na BCMF01000028.1 unplaced-scaffold na na BCMF01000028.1 = NZ_BCMF01000028.1 Primary Assembly 294 na BCMF01000029.1 unplaced-scaffold na na BCMF01000029.1 = NZ_BCMF01000029.1 Primary Assembly 284 na BCMF01000030.1 unplaced-scaffold na na BCMF01000030.1 = NZ_BCMF01000030.1 Primary Assembly 275 na BCMF01000031.1 unplaced-scaffold na na BCMF01000031.1 = NZ_BCMF01000031.1 Primary Assembly 275 na BCMF01000032.1 unplaced-scaffold na na BCMF01000032.1 = NZ_BCMF01000032.1 Primary Assembly 272 na BCMF01000033.1 unplaced-scaffold na na BCMF01000033.1 = NZ_BCMF01000033.1 Primary Assembly 270 na BCMF01000034.1 unplaced-scaffold na na BCMF01000034.1 = NZ_BCMF01000034.1 Primary Assembly 269 na BCMF01000035.1 unplaced-scaffold na na BCMF01000035.1 = NZ_BCMF01000035.1 Primary Assembly 268 na BCMF01000036.1 unplaced-scaffold na na BCMF01000036.1 = NZ_BCMF01000036.1 Primary Assembly 268 na BCMF01000037.1 unplaced-scaffold na na BCMF01000037.1 = NZ_BCMF01000037.1 Primary Assembly 267 na BCMF01000038.1 unplaced-scaffold na na BCMF01000038.1 = NZ_BCMF01000038.1 Primary Assembly 266 na BCMF01000039.1 unplaced-scaffold na na BCMF01000039.1 = NZ_BCMF01000039.1 Primary Assembly 265 na BCMF01000040.1 unplaced-scaffold na na BCMF01000040.1 = NZ_BCMF01000040.1 Primary Assembly 264 na BCMF01000041.1 unplaced-scaffold na na BCMF01000041.1 = NZ_BCMF01000041.1 Primary Assembly 262 na BCMF01000042.1 unplaced-scaffold na na BCMF01000042.1 = NZ_BCMF01000042.1 Primary Assembly 262 na BCMF01000043.1 unplaced-scaffold na na BCMF01000043.1 = NZ_BCMF01000043.1 Primary Assembly 258 na BCMF01000044.1 unplaced-scaffold na na BCMF01000044.1 = NZ_BCMF01000044.1 Primary Assembly 258 na BCMF01000045.1 unplaced-scaffold na na BCMF01000045.1 = NZ_BCMF01000045.1 Primary Assembly 255 na BCMF01000046.1 unplaced-scaffold na na BCMF01000046.1 = NZ_BCMF01000046.1 Primary Assembly 254 na BCMF01000047.1 unplaced-scaffold na na BCMF01000047.1 = NZ_BCMF01000047.1 Primary Assembly 253 na BCMF01000048.1 unplaced-scaffold na na BCMF01000048.1 = NZ_BCMF01000048.1 Primary Assembly 252 na BCMF01000049.1 unplaced-scaffold na na BCMF01000049.1 = NZ_BCMF01000049.1 Primary Assembly 251 na BCMF01000050.1 unplaced-scaffold na na BCMF01000050.1 = NZ_BCMF01000050.1 Primary Assembly 251 na BCMF01000051.1 unplaced-scaffold na na BCMF01000051.1 = NZ_BCMF01000051.1 Primary Assembly 250 na BCMF01000052.1 unplaced-scaffold na na BCMF01000052.1 = NZ_BCMF01000052.1 Primary Assembly 249 na BCMF01000053.1 unplaced-scaffold na na BCMF01000053.1 = NZ_BCMF01000053.1 Primary Assembly 248 na BCMF01000054.1 unplaced-scaffold na na BCMF01000054.1 = NZ_BCMF01000054.1 Primary Assembly 246 na BCMF01000055.1 unplaced-scaffold na na BCMF01000055.1 = NZ_BCMF01000055.1 Primary Assembly 246 na BCMF01000056.1 unplaced-scaffold na na BCMF01000056.1 = NZ_BCMF01000056.1 Primary Assembly 246 na BCMF01000057.1 unplaced-scaffold na na BCMF01000057.1 = NZ_BCMF01000057.1 Primary Assembly 245 na BCMF01000058.1 unplaced-scaffold na na BCMF01000058.1 = NZ_BCMF01000058.1 Primary Assembly 245 na BCMF01000059.1 unplaced-scaffold na na BCMF01000059.1 = NZ_BCMF01000059.1 Primary Assembly 242 na BCMF01000060.1 unplaced-scaffold na na BCMF01000060.1 = NZ_BCMF01000060.1 Primary Assembly 242 na BCMF01000061.1 unplaced-scaffold na na BCMF01000061.1 = NZ_BCMF01000061.1 Primary Assembly 242 na BCMF01000062.1 unplaced-scaffold na na BCMF01000062.1 = NZ_BCMF01000062.1 Primary Assembly 241 na BCMF01000063.1 unplaced-scaffold na na BCMF01000063.1 = NZ_BCMF01000063.1 Primary Assembly 241 na BCMF01000064.1 unplaced-scaffold na na BCMF01000064.1 = NZ_BCMF01000064.1 Primary Assembly 241 na BCMF01000065.1 unplaced-scaffold na na BCMF01000065.1 = NZ_BCMF01000065.1 Primary Assembly 241 na BCMF01000066.1 unplaced-scaffold na na BCMF01000066.1 = NZ_BCMF01000066.1 Primary Assembly 240 na BCMF01000067.1 unplaced-scaffold na na BCMF01000067.1 = NZ_BCMF01000067.1 Primary Assembly 240 na BCMF01000068.1 unplaced-scaffold na na BCMF01000068.1 = NZ_BCMF01000068.1 Primary Assembly 240 na BCMF01000069.1 unplaced-scaffold na na BCMF01000069.1 = NZ_BCMF01000069.1 Primary Assembly 240 na BCMF01000070.1 unplaced-scaffold na na BCMF01000070.1 = NZ_BCMF01000070.1 Primary Assembly 240 na BCMF01000071.1 unplaced-scaffold na na BCMF01000071.1 = NZ_BCMF01000071.1 Primary Assembly 237 na BCMF01000072.1 unplaced-scaffold na na BCMF01000072.1 = NZ_BCMF01000072.1 Primary Assembly 237 na BCMF01000073.1 unplaced-scaffold na na BCMF01000073.1 = NZ_BCMF01000073.1 Primary Assembly 237 na BCMF01000074.1 unplaced-scaffold na na BCMF01000074.1 = NZ_BCMF01000074.1 Primary Assembly 237 na BCMF01000075.1 unplaced-scaffold na na BCMF01000075.1 = NZ_BCMF01000075.1 Primary Assembly 237 na BCMF01000076.1 unplaced-scaffold na na BCMF01000076.1 = NZ_BCMF01000076.1 Primary Assembly 237 na BCMF01000077.1 unplaced-scaffold na na BCMF01000077.1 = NZ_BCMF01000077.1 Primary Assembly 237 na BCMF01000078.1 unplaced-scaffold na na BCMF01000078.1 = NZ_BCMF01000078.1 Primary Assembly 237 na BCMF01000079.1 unplaced-scaffold na na BCMF01000079.1 = NZ_BCMF01000079.1 Primary Assembly 237 na BCMF01000080.1 unplaced-scaffold na na BCMF01000080.1 = NZ_BCMF01000080.1 Primary Assembly 237 na BCMF01000081.1 unplaced-scaffold na na BCMF01000081.1 = NZ_BCMF01000081.1 Primary Assembly 236 na BCMF01000082.1 unplaced-scaffold na na BCMF01000082.1 = NZ_BCMF01000082.1 Primary Assembly 236 na BCMF01000083.1 unplaced-scaffold na na BCMF01000083.1 = NZ_BCMF01000083.1 Primary Assembly 236 na BCMF01000084.1 unplaced-scaffold na na BCMF01000084.1 = NZ_BCMF01000084.1 Primary Assembly 236 na BCMF01000085.1 unplaced-scaffold na na BCMF01000085.1 = NZ_BCMF01000085.1 Primary Assembly 235 na BCMF01000086.1 unplaced-scaffold na na BCMF01000086.1 = NZ_BCMF01000086.1 Primary Assembly 235 na BCMF01000087.1 unplaced-scaffold na na BCMF01000087.1 = NZ_BCMF01000087.1 Primary Assembly 219 na