# Assembly name: ASM221798v1 # Organism name: Secundilactobacillus pentosiphilus (firmicutes) # Infraspecific name: strain=IWT25 # Taxid: 1714682 # BioSample: SAMD00042398 # BioProject: PRJDB4275 # Submitter: NARO Institute of Livestock and Grassland Science # Date: 2017-06-14 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: BCMI01 # Assembly method: Platanus v. 1.2.4 # Genome coverage: 60X # Sequencing technology: Illumina MiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_002217985.1 # RefSeq assembly accession: GCF_002217985.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_002217995.1 GCF_002217995.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name BCMI01000001.1 unplaced-scaffold na na BCMI01000001.1 = NZ_BCMI01000001.1 Primary Assembly 240454 na BCMI01000002.1 unplaced-scaffold na na BCMI01000002.1 = NZ_BCMI01000002.1 Primary Assembly 174491 na BCMI01000003.1 unplaced-scaffold na na BCMI01000003.1 = NZ_BCMI01000003.1 Primary Assembly 166639 na BCMI01000004.1 unplaced-scaffold na na BCMI01000004.1 = NZ_BCMI01000004.1 Primary Assembly 155610 na BCMI01000005.1 unplaced-scaffold na na BCMI01000005.1 = NZ_BCMI01000005.1 Primary Assembly 151680 na BCMI01000006.1 unplaced-scaffold na na BCMI01000006.1 = NZ_BCMI01000006.1 Primary Assembly 116411 na BCMI01000007.1 unplaced-scaffold na na BCMI01000007.1 = NZ_BCMI01000007.1 Primary Assembly 111551 na BCMI01000008.1 unplaced-scaffold na na BCMI01000008.1 = NZ_BCMI01000008.1 Primary Assembly 110608 na BCMI01000009.1 unplaced-scaffold na na BCMI01000009.1 = NZ_BCMI01000009.1 Primary Assembly 103801 na BCMI01000010.1 unplaced-scaffold na na BCMI01000010.1 = NZ_BCMI01000010.1 Primary Assembly 96843 na BCMI01000011.1 unplaced-scaffold na na BCMI01000011.1 = NZ_BCMI01000011.1 Primary Assembly 82897 na BCMI01000012.1 unplaced-scaffold na na BCMI01000012.1 = NZ_BCMI01000012.1 Primary Assembly 80045 na BCMI01000013.1 unplaced-scaffold na na BCMI01000013.1 = NZ_BCMI01000013.1 Primary Assembly 72367 na BCMI01000014.1 unplaced-scaffold na na BCMI01000014.1 = NZ_BCMI01000014.1 Primary Assembly 70290 na BCMI01000015.1 unplaced-scaffold na na BCMI01000015.1 = NZ_BCMI01000015.1 Primary Assembly 67176 na BCMI01000016.1 unplaced-scaffold na na BCMI01000016.1 = NZ_BCMI01000016.1 Primary Assembly 65276 na BCMI01000017.1 unplaced-scaffold na na BCMI01000017.1 = NZ_BCMI01000017.1 Primary Assembly 64862 na BCMI01000018.1 unplaced-scaffold na na BCMI01000018.1 = NZ_BCMI01000018.1 Primary Assembly 63866 na BCMI01000019.1 unplaced-scaffold na na BCMI01000019.1 = NZ_BCMI01000019.1 Primary Assembly 50850 na BCMI01000020.1 unplaced-scaffold na na BCMI01000020.1 = NZ_BCMI01000020.1 Primary Assembly 45500 na BCMI01000021.1 unplaced-scaffold na na BCMI01000021.1 = NZ_BCMI01000021.1 Primary Assembly 45161 na BCMI01000022.1 unplaced-scaffold na na BCMI01000022.1 = NZ_BCMI01000022.1 Primary Assembly 41816 na BCMI01000023.1 unplaced-scaffold na na BCMI01000023.1 = NZ_BCMI01000023.1 Primary Assembly 41623 na BCMI01000024.1 unplaced-scaffold na na BCMI01000024.1 = NZ_BCMI01000024.1 Primary Assembly 36259 na BCMI01000025.1 unplaced-scaffold na na BCMI01000025.1 = NZ_BCMI01000025.1 Primary Assembly 34705 na BCMI01000026.1 unplaced-scaffold na na BCMI01000026.1 = NZ_BCMI01000026.1 Primary Assembly 32830 na BCMI01000027.1 unplaced-scaffold na na BCMI01000027.1 = NZ_BCMI01000027.1 Primary Assembly 31797 na BCMI01000028.1 unplaced-scaffold na na BCMI01000028.1 = NZ_BCMI01000028.1 Primary Assembly 30682 na BCMI01000029.1 unplaced-scaffold na na BCMI01000029.1 = NZ_BCMI01000029.1 Primary Assembly 26921 na BCMI01000030.1 unplaced-scaffold na na BCMI01000030.1 = NZ_BCMI01000030.1 Primary Assembly 25965 na BCMI01000031.1 unplaced-scaffold na na BCMI01000031.1 = NZ_BCMI01000031.1 Primary Assembly 25211 na BCMI01000032.1 unplaced-scaffold na na BCMI01000032.1 = NZ_BCMI01000032.1 Primary Assembly 23493 na BCMI01000033.1 unplaced-scaffold na na BCMI01000033.1 = NZ_BCMI01000033.1 Primary Assembly 19906 na BCMI01000034.1 unplaced-scaffold na na BCMI01000034.1 = NZ_BCMI01000034.1 Primary Assembly 18194 na BCMI01000035.1 unplaced-scaffold na na BCMI01000035.1 = NZ_BCMI01000035.1 Primary Assembly 15485 na BCMI01000036.1 unplaced-scaffold na na BCMI01000036.1 = NZ_BCMI01000036.1 Primary Assembly 14579 na BCMI01000037.1 unplaced-scaffold na na BCMI01000037.1 = NZ_BCMI01000037.1 Primary Assembly 14479 na BCMI01000038.1 unplaced-scaffold na na BCMI01000038.1 = NZ_BCMI01000038.1 Primary Assembly 13201 na BCMI01000039.1 unplaced-scaffold na na BCMI01000039.1 = NZ_BCMI01000039.1 Primary Assembly 13154 na BCMI01000040.1 unplaced-scaffold na na BCMI01000040.1 = NZ_BCMI01000040.1 Primary Assembly 12983 na BCMI01000041.1 unplaced-scaffold na na BCMI01000041.1 = NZ_BCMI01000041.1 Primary Assembly 12884 na BCMI01000042.1 unplaced-scaffold na na BCMI01000042.1 = NZ_BCMI01000042.1 Primary Assembly 9942 na BCMI01000043.1 unplaced-scaffold na na BCMI01000043.1 = NZ_BCMI01000043.1 Primary Assembly 9392 na BCMI01000044.1 unplaced-scaffold na na BCMI01000044.1 = NZ_BCMI01000044.1 Primary Assembly 8572 na BCMI01000045.1 unplaced-scaffold na na BCMI01000045.1 = NZ_BCMI01000045.1 Primary Assembly 7555 na BCMI01000046.1 unplaced-scaffold na na BCMI01000046.1 = NZ_BCMI01000046.1 Primary Assembly 6812 na BCMI01000047.1 unplaced-scaffold na na BCMI01000047.1 = NZ_BCMI01000047.1 Primary Assembly 6776 na BCMI01000048.1 unplaced-scaffold na na BCMI01000048.1 = NZ_BCMI01000048.1 Primary Assembly 6005 na BCMI01000049.1 unplaced-scaffold na na BCMI01000049.1 = NZ_BCMI01000049.1 Primary Assembly 4897 na BCMI01000050.1 unplaced-scaffold na na BCMI01000050.1 = NZ_BCMI01000050.1 Primary Assembly 4799 na BCMI01000051.1 unplaced-scaffold na na BCMI01000051.1 = NZ_BCMI01000051.1 Primary Assembly 4290 na BCMI01000052.1 unplaced-scaffold na na BCMI01000052.1 = NZ_BCMI01000052.1 Primary Assembly 1915 na BCMI01000053.1 unplaced-scaffold na na BCMI01000053.1 = NZ_BCMI01000053.1 Primary Assembly 1798 na BCMI01000054.1 unplaced-scaffold na na BCMI01000054.1 = NZ_BCMI01000054.1 Primary Assembly 1660 na BCMI01000055.1 unplaced-scaffold na na BCMI01000055.1 = NZ_BCMI01000055.1 Primary Assembly 1587 na BCMI01000056.1 unplaced-scaffold na na BCMI01000056.1 = NZ_BCMI01000056.1 Primary Assembly 1457 na BCMI01000057.1 unplaced-scaffold na na BCMI01000057.1 = NZ_BCMI01000057.1 Primary Assembly 1339 na BCMI01000058.1 unplaced-scaffold na na BCMI01000058.1 = NZ_BCMI01000058.1 Primary Assembly 1168 na BCMI01000059.1 unplaced-scaffold na na BCMI01000059.1 = NZ_BCMI01000059.1 Primary Assembly 1073 na BCMI01000060.1 unplaced-scaffold na na BCMI01000060.1 = NZ_BCMI01000060.1 Primary Assembly 1013 na BCMI01000061.1 unplaced-scaffold na na BCMI01000061.1 = NZ_BCMI01000061.1 Primary Assembly 813 na BCMI01000062.1 unplaced-scaffold na na BCMI01000062.1 = NZ_BCMI01000062.1 Primary Assembly 722 na BCMI01000063.1 unplaced-scaffold na na BCMI01000063.1 = NZ_BCMI01000063.1 Primary Assembly 655 na BCMI01000064.1 unplaced-scaffold na na BCMI01000064.1 = NZ_BCMI01000064.1 Primary Assembly 642 na BCMI01000065.1 unplaced-scaffold na na BCMI01000065.1 = NZ_BCMI01000065.1 Primary Assembly 606 na BCMI01000066.1 unplaced-scaffold na na BCMI01000066.1 = NZ_BCMI01000066.1 Primary Assembly 553 na BCMI01000067.1 unplaced-scaffold na na BCMI01000067.1 = NZ_BCMI01000067.1 Primary Assembly 443 na BCMI01000068.1 unplaced-scaffold na na BCMI01000068.1 = NZ_BCMI01000068.1 Primary Assembly 429 na BCMI01000069.1 unplaced-scaffold na na BCMI01000069.1 = NZ_BCMI01000069.1 Primary Assembly 429 na BCMI01000070.1 unplaced-scaffold na na BCMI01000070.1 = NZ_BCMI01000070.1 Primary Assembly 418 na BCMI01000071.1 unplaced-scaffold na na BCMI01000071.1 = NZ_BCMI01000071.1 Primary Assembly 382 na BCMI01000072.1 unplaced-scaffold na na BCMI01000072.1 = NZ_BCMI01000072.1 Primary Assembly 343 na BCMI01000073.1 unplaced-scaffold na na BCMI01000073.1 = NZ_BCMI01000073.1 Primary Assembly 300 na BCMI01000074.1 unplaced-scaffold na na BCMI01000074.1 = NZ_BCMI01000074.1 Primary Assembly 286 na BCMI01000075.1 unplaced-scaffold na na BCMI01000075.1 = NZ_BCMI01000075.1 Primary Assembly 286 na BCMI01000076.1 unplaced-scaffold na na BCMI01000076.1 = NZ_BCMI01000076.1 Primary Assembly 275 na BCMI01000077.1 unplaced-scaffold na na BCMI01000077.1 = NZ_BCMI01000077.1 Primary Assembly 275 na BCMI01000078.1 unplaced-scaffold na na BCMI01000078.1 = NZ_BCMI01000078.1 Primary Assembly 270 na BCMI01000079.1 unplaced-scaffold na na BCMI01000079.1 = NZ_BCMI01000079.1 Primary Assembly 270 na BCMI01000080.1 unplaced-scaffold na na BCMI01000080.1 = NZ_BCMI01000080.1 Primary Assembly 252 na BCMI01000081.1 unplaced-scaffold na na BCMI01000081.1 = NZ_BCMI01000081.1 Primary Assembly 250 na BCMI01000082.1 unplaced-scaffold na na BCMI01000082.1 = NZ_BCMI01000082.1 Primary Assembly 245 na BCMI01000083.1 unplaced-scaffold na na BCMI01000083.1 = NZ_BCMI01000083.1 Primary Assembly 233 na BCMI01000084.1 unplaced-scaffold na na BCMI01000084.1 = NZ_BCMI01000084.1 Primary Assembly 228 na BCMI01000085.1 unplaced-scaffold na na BCMI01000085.1 = NZ_BCMI01000085.1 Primary Assembly 217 na BCMI01000086.1 unplaced-scaffold na na BCMI01000086.1 = NZ_BCMI01000086.1 Primary Assembly 210 na BCMI01000087.1 unplaced-scaffold na na BCMI01000087.1 = NZ_BCMI01000087.1 Primary Assembly 209 na BCMI01000088.1 unplaced-scaffold na na BCMI01000088.1 = NZ_BCMI01000088.1 Primary Assembly 208 na BCMI01000089.1 unplaced-scaffold na na BCMI01000089.1 = NZ_BCMI01000089.1 Primary Assembly 207 na BCMI01000090.1 unplaced-scaffold na na BCMI01000090.1 = NZ_BCMI01000090.1 Primary Assembly 207 na BCMI01000091.1 unplaced-scaffold na na BCMI01000091.1 = NZ_BCMI01000091.1 Primary Assembly 207 na BCMI01000092.1 unplaced-scaffold na na BCMI01000092.1 = NZ_BCMI01000092.1 Primary Assembly 207 na BCMI01000093.1 unplaced-scaffold na na BCMI01000093.1 = NZ_BCMI01000093.1 Primary Assembly 207 na BCMI01000094.1 unplaced-scaffold na na BCMI01000094.1 = NZ_BCMI01000094.1 Primary Assembly 207 na BCMI01000095.1 unplaced-scaffold na na BCMI01000095.1 = NZ_BCMI01000095.1 Primary Assembly 207 na BCMI01000096.1 unplaced-scaffold na na BCMI01000096.1 = NZ_BCMI01000096.1 Primary Assembly 207 na BCMI01000097.1 unplaced-scaffold na na BCMI01000097.1 = NZ_BCMI01000097.1 Primary Assembly 207 na BCMI01000098.1 unplaced-scaffold na na BCMI01000098.1 = NZ_BCMI01000098.1 Primary Assembly 207 na BCMI01000099.1 unplaced-scaffold na na BCMI01000099.1 = NZ_BCMI01000099.1 Primary Assembly 207 na BCMI01000100.1 unplaced-scaffold na na BCMI01000100.1 = NZ_BCMI01000100.1 Primary Assembly 207 na BCMI01000101.1 unplaced-scaffold na na BCMI01000101.1 = NZ_BCMI01000101.1 Primary Assembly 207 na BCMI01000102.1 unplaced-scaffold na na BCMI01000102.1 = NZ_BCMI01000102.1 Primary Assembly 207 na BCMI01000103.1 unplaced-scaffold na na BCMI01000103.1 = NZ_BCMI01000103.1 Primary Assembly 207 na BCMI01000104.1 unplaced-scaffold na na BCMI01000104.1 = NZ_BCMI01000104.1 Primary Assembly 207 na BCMI01000105.1 unplaced-scaffold na na BCMI01000105.1 = NZ_BCMI01000105.1 Primary Assembly 207 na BCMI01000106.1 unplaced-scaffold na na BCMI01000106.1 = NZ_BCMI01000106.1 Primary Assembly 207 na BCMI01000107.1 unplaced-scaffold na na BCMI01000107.1 = NZ_BCMI01000107.1 Primary Assembly 207 na BCMI01000108.1 unplaced-scaffold na na BCMI01000108.1 = NZ_BCMI01000108.1 Primary Assembly 207 na BCMI01000109.1 unplaced-scaffold na na BCMI01000109.1 = NZ_BCMI01000109.1 Primary Assembly 207 na BCMI01000110.1 unplaced-scaffold na na BCMI01000110.1 = NZ_BCMI01000110.1 Primary Assembly 207 na BCMI01000111.1 unplaced-scaffold na na BCMI01000111.1 = NZ_BCMI01000111.1 Primary Assembly 207 na BCMI01000112.1 unplaced-scaffold na na BCMI01000112.1 = NZ_BCMI01000112.1 Primary Assembly 207 na BCMI01000113.1 unplaced-scaffold na na BCMI01000113.1 = NZ_BCMI01000113.1 Primary Assembly 207 na BCMI01000114.1 unplaced-scaffold na na BCMI01000114.1 = NZ_BCMI01000114.1 Primary Assembly 207 na BCMI01000115.1 unplaced-scaffold na na BCMI01000115.1 = NZ_BCMI01000115.1 Primary Assembly 207 na BCMI01000116.1 unplaced-scaffold na na BCMI01000116.1 = NZ_BCMI01000116.1 Primary Assembly 207 na BCMI01000117.1 unplaced-scaffold na na BCMI01000117.1 = NZ_BCMI01000117.1 Primary Assembly 207 na BCMI01000118.1 unplaced-scaffold na na BCMI01000118.1 = NZ_BCMI01000118.1 Primary Assembly 207 na BCMI01000119.1 unplaced-scaffold na na BCMI01000119.1 = NZ_BCMI01000119.1 Primary Assembly 207 na BCMI01000120.1 unplaced-scaffold na na BCMI01000120.1 = NZ_BCMI01000120.1 Primary Assembly 207 na BCMI01000121.1 unplaced-scaffold na na BCMI01000121.1 = NZ_BCMI01000121.1 Primary Assembly 207 na BCMI01000122.1 unplaced-scaffold na na BCMI01000122.1 = NZ_BCMI01000122.1 Primary Assembly 207 na BCMI01000123.1 unplaced-scaffold na na BCMI01000123.1 = NZ_BCMI01000123.1 Primary Assembly 207 na BCMI01000124.1 unplaced-scaffold na na BCMI01000124.1 = NZ_BCMI01000124.1 Primary Assembly 207 na BCMI01000125.1 unplaced-scaffold na na BCMI01000125.1 = NZ_BCMI01000125.1 Primary Assembly 205 na BCMI01000126.1 unplaced-scaffold na na BCMI01000126.1 = NZ_BCMI01000126.1 Primary Assembly 205 na BCMI01000127.1 unplaced-scaffold na na BCMI01000127.1 = NZ_BCMI01000127.1 Primary Assembly 204 na BCMI01000128.1 unplaced-scaffold na na BCMI01000128.1 = NZ_BCMI01000128.1 Primary Assembly 204 na BCMI01000129.1 unplaced-scaffold na na BCMI01000129.1 = NZ_BCMI01000129.1 Primary Assembly 202 na BCMI01000130.1 unplaced-scaffold na na BCMI01000130.1 = NZ_BCMI01000130.1 Primary Assembly 201 na BCMI01000131.1 unplaced-scaffold na na BCMI01000131.1 = NZ_BCMI01000131.1 Primary Assembly 200 na