# Assembly name: ASM225298v1 # Organism name: Halorubrum halodurans (euryarchaeotes) # Infraspecific name: strain=Cb34 # Taxid: 1383851 # BioSample: SAMN02716035 # BioProject: PRJNA232799 # Submitter: University of Conn. # Date: 2017-08-15 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: NHPJ01 # Assembly method: CLC NGS Cell v. 6.0.5 # Expected final version: yes # Genome coverage: 47x # Sequencing technology: Illumina MiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_002252985.1 # RefSeq assembly accession: GCF_002252985.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_002253005.1 GCF_002253005.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name contig0081 unplaced-scaffold na na NHPJ01000001.1 = NZ_NHPJ01000001.1 Primary Assembly 17090 na contig0115 unplaced-scaffold na na NHPJ01000002.1 = NZ_NHPJ01000002.1 Primary Assembly 2921 na contig0008 unplaced-scaffold na na NHPJ01000003.1 = NZ_NHPJ01000003.1 Primary Assembly 45791 na contig0075 unplaced-scaffold na na NHPJ01000004.1 = NZ_NHPJ01000004.1 Primary Assembly 23798 na contig0011 unplaced-scaffold na na NHPJ01000005.1 = NZ_NHPJ01000005.1 Primary Assembly 55902 na contig0021 unplaced-scaffold na na NHPJ01000006.1 = NZ_NHPJ01000006.1 Primary Assembly 48644 na contig0078 unplaced-scaffold na na NHPJ01000007.1 = NZ_NHPJ01000007.1 Primary Assembly 10037 na contig0033 unplaced-scaffold na na NHPJ01000008.1 = NZ_NHPJ01000008.1 Primary Assembly 38594 na contig0112 unplaced-scaffold na na NHPJ01000009.1 = NZ_NHPJ01000009.1 Primary Assembly 924 na contig0028 unplaced-scaffold na na NHPJ01000010.1 = NZ_NHPJ01000010.1 Primary Assembly 23636 na contig0139 unplaced-scaffold na na NHPJ01000011.1 = NZ_NHPJ01000011.1 Primary Assembly 1072 na contig0046 unplaced-scaffold na na NHPJ01000012.1 = NZ_NHPJ01000012.1 Primary Assembly 4564 na contig0135 unplaced-scaffold na na NHPJ01000013.1 = NZ_NHPJ01000013.1 Primary Assembly 1830 na contig0072 unplaced-scaffold na na NHPJ01000014.1 = NZ_NHPJ01000014.1 Primary Assembly 18378 na contig0055 unplaced-scaffold na na NHPJ01000015.1 = NZ_NHPJ01000015.1 Primary Assembly 45801 na contig0130 unplaced-scaffold na na NHPJ01000016.1 = NZ_NHPJ01000016.1 Primary Assembly 1058 na contig0042 unplaced-scaffold na na NHPJ01000017.1 = NZ_NHPJ01000017.1 Primary Assembly 54027 na contig0109 unplaced-scaffold na na NHPJ01000018.1 = NZ_NHPJ01000018.1 Primary Assembly 6852 na contig0121 unplaced-scaffold na na NHPJ01000019.1 = NZ_NHPJ01000019.1 Primary Assembly 1106 na contig0096 unplaced-scaffold na na NHPJ01000020.1 = NZ_NHPJ01000020.1 Primary Assembly 5620 na contig0089 unplaced-scaffold na na NHPJ01000021.1 = NZ_NHPJ01000021.1 Primary Assembly 18614 na contig0084 unplaced-scaffold na na NHPJ01000022.1 = NZ_NHPJ01000022.1 Primary Assembly 24986 na contig0132 unplaced-scaffold na na NHPJ01000023.1 = NZ_NHPJ01000023.1 Primary Assembly 1632 na contig0065 unplaced-scaffold na na NHPJ01000024.1 = NZ_NHPJ01000024.1 Primary Assembly 16962 na contig0128 unplaced-scaffold na na NHPJ01000025.1 = NZ_NHPJ01000025.1 Primary Assembly 9142 na contig0001 unplaced-scaffold na na NHPJ01000026.1 = NZ_NHPJ01000026.1 Primary Assembly 17857 na contig0022 unplaced-scaffold na na NHPJ01000027.1 = NZ_NHPJ01000027.1 Primary Assembly 31844 na contig0073 unplaced-scaffold na na NHPJ01000028.1 = NZ_NHPJ01000028.1 Primary Assembly 3867 na contig0083 unplaced-scaffold na na NHPJ01000029.1 = NZ_NHPJ01000029.1 Primary Assembly 8076 na contig0059 unplaced-scaffold na na NHPJ01000030.1 = NZ_NHPJ01000030.1 Primary Assembly 40736 na contig0019 unplaced-scaffold na na NHPJ01000031.1 = NZ_NHPJ01000031.1 Primary Assembly 3305 na contig0103 unplaced-scaffold na na NHPJ01000032.1 = NZ_NHPJ01000032.1 Primary Assembly 16590 na contig0118 unplaced-scaffold na na NHPJ01000033.1 = NZ_NHPJ01000033.1 Primary Assembly 5157 na contig0142 unplaced-scaffold na na NHPJ01000034.1 = NZ_NHPJ01000034.1 Primary Assembly 671 na contig0048 unplaced-scaffold na na NHPJ01000035.1 = NZ_NHPJ01000035.1 Primary Assembly 19853 na contig0131 unplaced-scaffold na na NHPJ01000036.1 = NZ_NHPJ01000036.1 Primary Assembly 729 na contig0077 unplaced-scaffold na na NHPJ01000037.1 = NZ_NHPJ01000037.1 Primary Assembly 13763 na contig0036 unplaced-scaffold na na NHPJ01000038.1 = NZ_NHPJ01000038.1 Primary Assembly 30181 na contig0049 unplaced-scaffold na na NHPJ01000039.1 = NZ_NHPJ01000039.1 Primary Assembly 28748 na contig0031 unplaced-scaffold na na NHPJ01000040.1 = NZ_NHPJ01000040.1 Primary Assembly 33971 na contig0087 unplaced-scaffold na na NHPJ01000041.1 = NZ_NHPJ01000041.1 Primary Assembly 4914 na contig0057 unplaced-scaffold na na NHPJ01000042.1 = NZ_NHPJ01000042.1 Primary Assembly 13031 na contig0038 unplaced-scaffold na na NHPJ01000043.1 = NZ_NHPJ01000043.1 Primary Assembly 14522 na contig0007 unplaced-scaffold na na NHPJ01000044.1 = NZ_NHPJ01000044.1 Primary Assembly 42195 na contig0040 unplaced-scaffold na na NHPJ01000045.1 = NZ_NHPJ01000045.1 Primary Assembly 30817 na contig0023 unplaced-scaffold na na NHPJ01000046.1 = NZ_NHPJ01000046.1 Primary Assembly 6513 na contig0129 unplaced-scaffold na na NHPJ01000047.1 = NZ_NHPJ01000047.1 Primary Assembly 1013 na contig0126 unplaced-scaffold na na NHPJ01000048.1 = NZ_NHPJ01000048.1 Primary Assembly 12178 na contig0060 unplaced-scaffold na na NHPJ01000049.1 = NZ_NHPJ01000049.1 Primary Assembly 35600 na contig0017 unplaced-scaffold na na NHPJ01000050.1 = NZ_NHPJ01000050.1 Primary Assembly 44632 na contig0110 unplaced-scaffold na na NHPJ01000051.1 = NZ_NHPJ01000051.1 Primary Assembly 796 na contig0082 unplaced-scaffold na na NHPJ01000052.1 = NZ_NHPJ01000052.1 Primary Assembly 13139 na contig0141 unplaced-scaffold na na NHPJ01000053.1 = NZ_NHPJ01000053.1 Primary Assembly 2370 na contig0136 unplaced-scaffold na na NHPJ01000054.1 = NZ_NHPJ01000054.1 Primary Assembly 2042 na contig0122 unplaced-scaffold na na NHPJ01000055.1 = NZ_NHPJ01000055.1 Primary Assembly 658 na contig0063 unplaced-scaffold na na NHPJ01000056.1 = NZ_NHPJ01000056.1 Primary Assembly 26438 na contig0020 unplaced-scaffold na na NHPJ01000057.1 = NZ_NHPJ01000057.1 Primary Assembly 9299 na contig0056 unplaced-scaffold na na NHPJ01000058.1 = NZ_NHPJ01000058.1 Primary Assembly 33923 na contig0029 unplaced-scaffold na na NHPJ01000059.1 = NZ_NHPJ01000059.1 Primary Assembly 93738 na contig0076 unplaced-scaffold na na NHPJ01000060.1 = NZ_NHPJ01000060.1 Primary Assembly 74416 na contig0145 unplaced-scaffold na na NHPJ01000061.1 = NZ_NHPJ01000061.1 Primary Assembly 802 na contig0111 unplaced-scaffold na na NHPJ01000062.1 = NZ_NHPJ01000062.1 Primary Assembly 6910 na contig0079 unplaced-scaffold na na NHPJ01000063.1 = NZ_NHPJ01000063.1 Primary Assembly 5004 na contig0067 unplaced-scaffold na na NHPJ01000064.1 = NZ_NHPJ01000064.1 Primary Assembly 24719 na contig0119 unplaced-scaffold na na NHPJ01000065.1 = NZ_NHPJ01000065.1 Primary Assembly 721 na contig0105 unplaced-scaffold na na NHPJ01000066.1 = NZ_NHPJ01000066.1 Primary Assembly 12167 na contig0094 unplaced-scaffold na na NHPJ01000067.1 = NZ_NHPJ01000067.1 Primary Assembly 6505 na contig0009 unplaced-scaffold na na NHPJ01000068.1 = NZ_NHPJ01000068.1 Primary Assembly 38587 na contig0035 unplaced-scaffold na na NHPJ01000069.1 = NZ_NHPJ01000069.1 Primary Assembly 33790 na contig0041 unplaced-scaffold na na NHPJ01000070.1 = NZ_NHPJ01000070.1 Primary Assembly 20148 na contig0107 unplaced-scaffold na na NHPJ01000071.1 = NZ_NHPJ01000071.1 Primary Assembly 30474 na contig0071 unplaced-scaffold na na NHPJ01000072.1 = NZ_NHPJ01000072.1 Primary Assembly 28506 na contig0134 unplaced-scaffold na na NHPJ01000073.1 = NZ_NHPJ01000073.1 Primary Assembly 4481 na contig0069 unplaced-scaffold na na NHPJ01000074.1 = NZ_NHPJ01000074.1 Primary Assembly 9665 na contig0106 unplaced-scaffold na na NHPJ01000075.1 = NZ_NHPJ01000075.1 Primary Assembly 6835 na contig0058 unplaced-scaffold na na NHPJ01000076.1 = NZ_NHPJ01000076.1 Primary Assembly 715 na contig0116 unplaced-scaffold na na NHPJ01000077.1 = NZ_NHPJ01000077.1 Primary Assembly 12982 na contig0030 unplaced-scaffold na na NHPJ01000078.1 = NZ_NHPJ01000078.1 Primary Assembly 4031 na contig0005 unplaced-scaffold na na NHPJ01000079.1 = NZ_NHPJ01000079.1 Primary Assembly 92652 na contig0070 unplaced-scaffold na na NHPJ01000080.1 = NZ_NHPJ01000080.1 Primary Assembly 14427 na contig0014 unplaced-scaffold na na NHPJ01000081.1 = NZ_NHPJ01000081.1 Primary Assembly 53309 na contig0025 unplaced-scaffold na na NHPJ01000082.1 = NZ_NHPJ01000082.1 Primary Assembly 50107 na contig0053 unplaced-scaffold na na NHPJ01000083.1 = NZ_NHPJ01000083.1 Primary Assembly 35797 na contig0102 unplaced-scaffold na na NHPJ01000084.1 = NZ_NHPJ01000084.1 Primary Assembly 2479 na contig0027 unplaced-scaffold na na NHPJ01000085.1 = NZ_NHPJ01000085.1 Primary Assembly 110547 na contig0095 unplaced-scaffold na na NHPJ01000086.1 = NZ_NHPJ01000086.1 Primary Assembly 12838 na contig0117 unplaced-scaffold na na NHPJ01000087.1 = NZ_NHPJ01000087.1 Primary Assembly 1360 na contig0018 unplaced-scaffold na na NHPJ01000088.1 = NZ_NHPJ01000088.1 Primary Assembly 15732 na contig0101 unplaced-scaffold na na NHPJ01000089.1 = NZ_NHPJ01000089.1 Primary Assembly 16961 na contig0143 unplaced-scaffold na na NHPJ01000090.1 = NZ_NHPJ01000090.1 Primary Assembly 537 na contig0037 unplaced-scaffold na na NHPJ01000091.1 = NZ_NHPJ01000091.1 Primary Assembly 23195 na contig0012 unplaced-scaffold na na NHPJ01000092.1 = NZ_NHPJ01000092.1 Primary Assembly 123404 na contig0026 unplaced-scaffold na na NHPJ01000093.1 = NZ_NHPJ01000093.1 Primary Assembly 32063 na contig0004 unplaced-scaffold na na NHPJ01000094.1 = NZ_NHPJ01000094.1 Primary Assembly 83831 na contig0068 unplaced-scaffold na na NHPJ01000095.1 = NZ_NHPJ01000095.1 Primary Assembly 38445 na contig0097 unplaced-scaffold na na NHPJ01000096.1 = NZ_NHPJ01000096.1 Primary Assembly 22588 na contig0052 unplaced-scaffold na na NHPJ01000097.1 = NZ_NHPJ01000097.1 Primary Assembly 42928 na contig0093 unplaced-scaffold na na NHPJ01000098.1 = NZ_NHPJ01000098.1 Primary Assembly 16404 na contig0002 unplaced-scaffold na na NHPJ01000099.1 = NZ_NHPJ01000099.1 Primary Assembly 94851 na contig0114 unplaced-scaffold na na NHPJ01000100.1 = NZ_NHPJ01000100.1 Primary Assembly 11556 na contig0074 unplaced-scaffold na na NHPJ01000101.1 = NZ_NHPJ01000101.1 Primary Assembly 13604 na contig0120 unplaced-scaffold na na NHPJ01000102.1 = NZ_NHPJ01000102.1 Primary Assembly 7464 na contig0054 unplaced-scaffold na na NHPJ01000103.1 = NZ_NHPJ01000103.1 Primary Assembly 59483 na contig0034 unplaced-scaffold na na NHPJ01000104.1 = NZ_NHPJ01000104.1 Primary Assembly 63563 na contig0127 unplaced-scaffold na na NHPJ01000105.1 = NZ_NHPJ01000105.1 Primary Assembly 1635 na contig0140 unplaced-scaffold na na NHPJ01000106.1 = NZ_NHPJ01000106.1 Primary Assembly 1526 na contig0032 unplaced-scaffold na na NHPJ01000107.1 = NZ_NHPJ01000107.1 Primary Assembly 52277 na contig0133 unplaced-scaffold na na NHPJ01000108.1 = NZ_NHPJ01000108.1 Primary Assembly 6908 na contig0085 unplaced-scaffold na na NHPJ01000109.1 = NZ_NHPJ01000109.1 Primary Assembly 21994 na contig0044 unplaced-scaffold na na NHPJ01000110.1 = NZ_NHPJ01000110.1 Primary Assembly 31697 na contig0092 unplaced-scaffold na na NHPJ01000111.1 = NZ_NHPJ01000111.1 Primary Assembly 11370 na contig0124 unplaced-scaffold na na NHPJ01000112.1 = NZ_NHPJ01000112.1 Primary Assembly 1420 na contig0091 unplaced-scaffold na na NHPJ01000113.1 = NZ_NHPJ01000113.1 Primary Assembly 6867 na contig0043 unplaced-scaffold na na NHPJ01000114.1 = NZ_NHPJ01000114.1 Primary Assembly 73577 na contig0062 unplaced-scaffold na na NHPJ01000115.1 = NZ_NHPJ01000115.1 Primary Assembly 19261 na contig0080 unplaced-scaffold na na NHPJ01000116.1 = NZ_NHPJ01000116.1 Primary Assembly 8070 na contig0061 unplaced-scaffold na na NHPJ01000117.1 = NZ_NHPJ01000117.1 Primary Assembly 14374 na contig0064 unplaced-scaffold na na NHPJ01000118.1 = NZ_NHPJ01000118.1 Primary Assembly 29047 na contig0108 unplaced-scaffold na na NHPJ01000119.1 = NZ_NHPJ01000119.1 Primary Assembly 4682 na contig0086 unplaced-scaffold na na NHPJ01000120.1 = NZ_NHPJ01000120.1 Primary Assembly 13443 na contig0050 unplaced-scaffold na na NHPJ01000121.1 = NZ_NHPJ01000121.1 Primary Assembly 49832 na contig0066 unplaced-scaffold na na NHPJ01000122.1 = NZ_NHPJ01000122.1 Primary Assembly 6975 na contig0137 unplaced-scaffold na na NHPJ01000123.1 = NZ_NHPJ01000123.1 Primary Assembly 527 na contig0125 unplaced-scaffold na na NHPJ01000124.1 = NZ_NHPJ01000124.1 Primary Assembly 1866 na contig0099 unplaced-scaffold na na NHPJ01000125.1 = NZ_NHPJ01000125.1 Primary Assembly 19305 na contig0104 unplaced-scaffold na na NHPJ01000126.1 = NZ_NHPJ01000126.1 Primary Assembly 6055 na contig0047 unplaced-scaffold na na NHPJ01000127.1 = NZ_NHPJ01000127.1 Primary Assembly 31051 na contig0051 unplaced-scaffold na na NHPJ01000128.1 = NZ_NHPJ01000128.1 Primary Assembly 17422 na contig0013 unplaced-scaffold na na NHPJ01000129.1 = NZ_NHPJ01000129.1 Primary Assembly 20949 na contig0098 unplaced-scaffold na na NHPJ01000130.1 = NZ_NHPJ01000130.1 Primary Assembly 12785 na contig0006 unplaced-scaffold na na NHPJ01000131.1 = NZ_NHPJ01000131.1 Primary Assembly 64748 na contig0010 unplaced-scaffold na na NHPJ01000132.1 = NZ_NHPJ01000132.1 Primary Assembly 79377 na contig0100 unplaced-scaffold na na NHPJ01000133.1 = NZ_NHPJ01000133.1 Primary Assembly 2908 na contig0003 unplaced-scaffold na na NHPJ01000134.1 = NZ_NHPJ01000134.1 Primary Assembly 13700 na contig0113 unplaced-scaffold na na NHPJ01000135.1 = NZ_NHPJ01000135.1 Primary Assembly 573 na contig0045 unplaced-scaffold na na NHPJ01000136.1 = NZ_NHPJ01000136.1 Primary Assembly 73369 na contig0039 unplaced-scaffold na na NHPJ01000137.1 = NZ_NHPJ01000137.1 Primary Assembly 3247 na contig0016 unplaced-scaffold na na NHPJ01000138.1 = NZ_NHPJ01000138.1 Primary Assembly 44042 na contig0144 unplaced-scaffold na na NHPJ01000139.1 = NZ_NHPJ01000139.1 Primary Assembly 502 na contig0090 unplaced-scaffold na na NHPJ01000140.1 = NZ_NHPJ01000140.1 Primary Assembly 1683 na contig0024 unplaced-scaffold na na NHPJ01000141.1 = NZ_NHPJ01000141.1 Primary Assembly 37684 na contig0015 unplaced-scaffold na na NHPJ01000142.1 = NZ_NHPJ01000142.1 Primary Assembly 26929 na contig0088 unplaced-scaffold na na NHPJ01000143.1 = NZ_NHPJ01000143.1 Primary Assembly 22715 na