# Assembly name: ASM273530v1 # Organism name: Agathobacter ruminis (firmicutes) # Infraspecific name: strain=JK623 # Taxid: 1712665 # BioSample: SAMN07811582 # BioProject: PRJNA414953 # Submitter: Institute of Animal Physiology and Genetics # Date: 2017-10-28 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: PDYG01 # Assembly method: SPAdes assembler v. 2.4.0 # Expected final version: yes # Reference guided assembly: GCF_900100545.1 # Genome coverage: 6x # Sequencing technology: Illumina HiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_002735305.1 # RefSeq assembly accession: GCF_002735305.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_002735315.1 GCF_002735315.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name contig000001 unplaced-scaffold na na PDYG01000001.1 = NZ_PDYG01000001.1 Primary Assembly 96607 na contig000002 unplaced-scaffold na na PDYG01000002.1 = NZ_PDYG01000002.1 Primary Assembly 43357 na contig000003 unplaced-scaffold na na PDYG01000003.1 = NZ_PDYG01000003.1 Primary Assembly 126981 na contig000004 unplaced-scaffold na na PDYG01000004.1 = NZ_PDYG01000004.1 Primary Assembly 86751 na contig000005 unplaced-scaffold na na PDYG01000005.1 = NZ_PDYG01000005.1 Primary Assembly 38466 na contig000006 unplaced-scaffold na na PDYG01000006.1 = NZ_PDYG01000006.1 Primary Assembly 98033 na contig000007 unplaced-scaffold na na PDYG01000007.1 = NZ_PDYG01000007.1 Primary Assembly 19629 na contig000008 unplaced-scaffold na na PDYG01000008.1 = NZ_PDYG01000008.1 Primary Assembly 95870 na contig000009 unplaced-scaffold na na PDYG01000009.1 = NZ_PDYG01000009.1 Primary Assembly 31928 na contig000010 unplaced-scaffold na na PDYG01000010.1 = NZ_PDYG01000010.1 Primary Assembly 44955 na contig000011 unplaced-scaffold na na PDYG01000011.1 = NZ_PDYG01000011.1 Primary Assembly 45285 na contig000012 unplaced-scaffold na na PDYG01000012.1 = NZ_PDYG01000012.1 Primary Assembly 63266 na contig000013 unplaced-scaffold na na PDYG01000013.1 = NZ_PDYG01000013.1 Primary Assembly 28283 na contig000014 unplaced-scaffold na na PDYG01000014.1 = NZ_PDYG01000014.1 Primary Assembly 79059 na contig000015 unplaced-scaffold na na PDYG01000015.1 = NZ_PDYG01000015.1 Primary Assembly 49986 na contig000016 unplaced-scaffold na na PDYG01000016.1 = NZ_PDYG01000016.1 Primary Assembly 25992 na contig000017 unplaced-scaffold na na PDYG01000017.1 = NZ_PDYG01000017.1 Primary Assembly 2472 na contig000018 unplaced-scaffold na na PDYG01000018.1 = NZ_PDYG01000018.1 Primary Assembly 71488 na contig000019 unplaced-scaffold na na PDYG01000019.1 = NZ_PDYG01000019.1 Primary Assembly 34075 na contig000020 unplaced-scaffold na na PDYG01000020.1 = NZ_PDYG01000020.1 Primary Assembly 6198 na contig000021 unplaced-scaffold na na PDYG01000021.1 = NZ_PDYG01000021.1 Primary Assembly 2538 na contig000022 unplaced-scaffold na na PDYG01000022.1 = NZ_PDYG01000022.1 Primary Assembly 14946 na contig000023 unplaced-scaffold na na PDYG01000023.1 = NZ_PDYG01000023.1 Primary Assembly 28016 na contig000024 unplaced-scaffold na na PDYG01000024.1 = NZ_PDYG01000024.1 Primary Assembly 17510 na contig000025 unplaced-scaffold na na PDYG01000025.1 = NZ_PDYG01000025.1 Primary Assembly 26075 na contig000026 unplaced-scaffold na na PDYG01000026.1 = NZ_PDYG01000026.1 Primary Assembly 10703 na contig000027 unplaced-scaffold na na PDYG01000027.1 = NZ_PDYG01000027.1 Primary Assembly 25783 na contig000028 unplaced-scaffold na na PDYG01000028.1 = NZ_PDYG01000028.1 Primary Assembly 5641 na contig000029 unplaced-scaffold na na PDYG01000029.1 = NZ_PDYG01000029.1 Primary Assembly 22357 na contig000030 unplaced-scaffold na na PDYG01000030.1 = NZ_PDYG01000030.1 Primary Assembly 79684 na contig000031 unplaced-scaffold na na PDYG01000031.1 = NZ_PDYG01000031.1 Primary Assembly 44972 na contig000032 unplaced-scaffold na na PDYG01000032.1 = NZ_PDYG01000032.1 Primary Assembly 39304 na contig000033 unplaced-scaffold na na PDYG01000033.1 = NZ_PDYG01000033.1 Primary Assembly 1445 na contig000034 unplaced-scaffold na na PDYG01000034.1 = NZ_PDYG01000034.1 Primary Assembly 2680 na contig000035 unplaced-scaffold na na PDYG01000035.1 = NZ_PDYG01000035.1 Primary Assembly 1669 na contig000036 unplaced-scaffold na na PDYG01000036.1 = NZ_PDYG01000036.1 Primary Assembly 2882 na contig000037 unplaced-scaffold na na PDYG01000037.1 = NZ_PDYG01000037.1 Primary Assembly 32032 na contig000038 unplaced-scaffold na na PDYG01000038.1 = NZ_PDYG01000038.1 Primary Assembly 15730 na contig000039 unplaced-scaffold na na PDYG01000039.1 = NZ_PDYG01000039.1 Primary Assembly 906 na contig000040 unplaced-scaffold na na PDYG01000040.1 = NZ_PDYG01000040.1 Primary Assembly 41320 na contig000041 unplaced-scaffold na na PDYG01000041.1 = NZ_PDYG01000041.1 Primary Assembly 3238 na contig000042 unplaced-scaffold na na PDYG01000042.1 = NZ_PDYG01000042.1 Primary Assembly 44119 na contig000043 unplaced-scaffold na na PDYG01000043.1 = NZ_PDYG01000043.1 Primary Assembly 16799 na contig000044 unplaced-scaffold na na PDYG01000044.1 = NZ_PDYG01000044.1 Primary Assembly 7960 na contig000045 unplaced-scaffold na na PDYG01000045.1 = NZ_PDYG01000045.1 Primary Assembly 336 na contig000046 unplaced-scaffold na na PDYG01000046.1 = NZ_PDYG01000046.1 Primary Assembly 220 na contig000047 unplaced-scaffold na na PDYG01000047.1 = NZ_PDYG01000047.1 Primary Assembly 14662 na contig000048 unplaced-scaffold na na PDYG01000048.1 = NZ_PDYG01000048.1 Primary Assembly 3257 na contig000049 unplaced-scaffold na na PDYG01000049.1 = NZ_PDYG01000049.1 Primary Assembly 6876 na contig000050 unplaced-scaffold na na PDYG01000050.1 = NZ_PDYG01000050.1 Primary Assembly 2892 na contig000051 unplaced-scaffold na na PDYG01000051.1 = NZ_PDYG01000051.1 Primary Assembly 11523 na contig000052 unplaced-scaffold na na PDYG01000052.1 = NZ_PDYG01000052.1 Primary Assembly 5451 na contig000053 unplaced-scaffold na na PDYG01000053.1 = NZ_PDYG01000053.1 Primary Assembly 358 na contig000054 unplaced-scaffold na na PDYG01000054.1 = NZ_PDYG01000054.1 Primary Assembly 382 na contig000055 unplaced-scaffold na na PDYG01000055.1 = NZ_PDYG01000055.1 Primary Assembly 23652 na contig000056 unplaced-scaffold na na PDYG01000056.1 = NZ_PDYG01000056.1 Primary Assembly 58719 na contig000057 unplaced-scaffold na na PDYG01000057.1 = NZ_PDYG01000057.1 Primary Assembly 5481 na contig000058 unplaced-scaffold na na PDYG01000058.1 = NZ_PDYG01000058.1 Primary Assembly 2000 na contig000059 unplaced-scaffold na na PDYG01000059.1 = NZ_PDYG01000059.1 Primary Assembly 480 na contig000060 unplaced-scaffold na na PDYG01000060.1 = NZ_PDYG01000060.1 Primary Assembly 235 na contig000061 unplaced-scaffold na na PDYG01000061.1 = NZ_PDYG01000061.1 Primary Assembly 1584 na contig000062 unplaced-scaffold na na PDYG01000062.1 = NZ_PDYG01000062.1 Primary Assembly 307 na contig000063 unplaced-scaffold na na PDYG01000063.1 = NZ_PDYG01000063.1 Primary Assembly 382 na contig000064 unplaced-scaffold na na PDYG01000064.1 = NZ_PDYG01000064.1 Primary Assembly 67534 na contig000065 unplaced-scaffold na na PDYG01000065.1 = NZ_PDYG01000065.1 Primary Assembly 1698 na contig000066 unplaced-scaffold na na PDYG01000066.1 = NZ_PDYG01000066.1 Primary Assembly 4942 na contig000067 unplaced-scaffold na na PDYG01000067.1 = NZ_PDYG01000067.1 Primary Assembly 1539 na contig000068 unplaced-scaffold na na PDYG01000068.1 = NZ_PDYG01000068.1 Primary Assembly 204 na contig000069 unplaced-scaffold na na PDYG01000069.1 = NZ_PDYG01000069.1 Primary Assembly 10715 na contig000070 unplaced-scaffold na na PDYG01000070.1 = NZ_PDYG01000070.1 Primary Assembly 40709 na contig000072 unplaced-scaffold na na PDYG01000071.1 = NZ_PDYG01000071.1 Primary Assembly 1569 na contig000073 unplaced-scaffold na na PDYG01000072.1 = NZ_PDYG01000072.1 Primary Assembly 499 na contig000074 unplaced-scaffold na na PDYG01000073.1 = NZ_PDYG01000073.1 Primary Assembly 731 na contig000075 unplaced-scaffold na na PDYG01000074.1 = NZ_PDYG01000074.1 Primary Assembly 187724 na contig000076 unplaced-scaffold na na PDYG01000075.1 = NZ_PDYG01000075.1 Primary Assembly 18148 na contig000077 unplaced-scaffold na na PDYG01000076.1 = NZ_PDYG01000076.1 Primary Assembly 649 na contig000078 unplaced-scaffold na na PDYG01000077.1 = NZ_PDYG01000077.1 Primary Assembly 1183 na contig000079 unplaced-scaffold na na PDYG01000078.1 = NZ_PDYG01000078.1 Primary Assembly 344 na contig000080 unplaced-scaffold na na PDYG01000079.1 = NZ_PDYG01000079.1 Primary Assembly 9057 na contig000081 unplaced-scaffold na na PDYG01000080.1 = NZ_PDYG01000080.1 Primary Assembly 709 na contig000082 unplaced-scaffold na na PDYG01000081.1 = NZ_PDYG01000081.1 Primary Assembly 293 na contig000083 unplaced-scaffold na na PDYG01000082.1 = NZ_PDYG01000082.1 Primary Assembly 28533 na contig000084 unplaced-scaffold na na PDYG01000083.1 = NZ_PDYG01000083.1 Primary Assembly 1172 na contig000085 unplaced-scaffold na na PDYG01000084.1 = NZ_PDYG01000084.1 Primary Assembly 359 na contig000086 unplaced-scaffold na na PDYG01000085.1 = NZ_PDYG01000085.1 Primary Assembly 1972 na contig000087 unplaced-scaffold na na PDYG01000086.1 = NZ_PDYG01000086.1 Primary Assembly 1947 na contig000088 unplaced-scaffold na na PDYG01000087.1 = NZ_PDYG01000087.1 Primary Assembly 59558 na contig000089 unplaced-scaffold na na PDYG01000088.1 = NZ_PDYG01000088.1 Primary Assembly 327 na contig000090 unplaced-scaffold na na PDYG01000089.1 = NZ_PDYG01000089.1 Primary Assembly 231 na contig000091 unplaced-scaffold na na PDYG01000090.1 = NZ_PDYG01000090.1 Primary Assembly 13873 na contig000092 unplaced-scaffold na na PDYG01000091.1 = NZ_PDYG01000091.1 Primary Assembly 906 na contig000093 unplaced-scaffold na na PDYG01000092.1 = NZ_PDYG01000092.1 Primary Assembly 3181 na contig000094 unplaced-scaffold na na PDYG01000093.1 = NZ_PDYG01000093.1 Primary Assembly 1023 na contig000095 unplaced-scaffold na na PDYG01000094.1 = NZ_PDYG01000094.1 Primary Assembly 1923 na contig000096 unplaced-scaffold na na PDYG01000095.1 = NZ_PDYG01000095.1 Primary Assembly 410 na contig000097 unplaced-scaffold na na PDYG01000096.1 = NZ_PDYG01000096.1 Primary Assembly 3805 na contig000098 unplaced-scaffold na na PDYG01000097.1 = NZ_PDYG01000097.1 Primary Assembly 204 na contig000099 unplaced-scaffold na na PDYG01000098.1 = NZ_PDYG01000098.1 Primary Assembly 247 na contig000100 unplaced-scaffold na na PDYG01000099.1 = NZ_PDYG01000099.1 Primary Assembly 264 na contig000101 unplaced-scaffold na na PDYG01000100.1 = NZ_PDYG01000100.1 Primary Assembly 102322 na contig000102 unplaced-scaffold na na PDYG01000101.1 = NZ_PDYG01000101.1 Primary Assembly 897 na contig000103 unplaced-scaffold na na PDYG01000102.1 = NZ_PDYG01000102.1 Primary Assembly 447 na contig000104 unplaced-scaffold na na PDYG01000103.1 = NZ_PDYG01000103.1 Primary Assembly 251 na contig000105 unplaced-scaffold na na PDYG01000104.1 = NZ_PDYG01000104.1 Primary Assembly 260 na contig000106 unplaced-scaffold na na PDYG01000105.1 = NZ_PDYG01000105.1 Primary Assembly 2522 na contig000107 unplaced-scaffold na na PDYG01000106.1 = NZ_PDYG01000106.1 Primary Assembly 221 na contig000108 unplaced-scaffold na na PDYG01000107.1 = NZ_PDYG01000107.1 Primary Assembly 1170 na contig000109 unplaced-scaffold na na PDYG01000108.1 = NZ_PDYG01000108.1 Primary Assembly 968 na contig000110 unplaced-scaffold na na PDYG01000109.1 = NZ_PDYG01000109.1 Primary Assembly 10097 na contig000111 unplaced-scaffold na na PDYG01000110.1 = NZ_PDYG01000110.1 Primary Assembly 658 na contig000112 unplaced-scaffold na na PDYG01000111.1 = NZ_PDYG01000111.1 Primary Assembly 359 na contig000113 unplaced-scaffold na na PDYG01000112.1 = NZ_PDYG01000112.1 Primary Assembly 50574 na contig000114 unplaced-scaffold na na PDYG01000113.1 = NZ_PDYG01000113.1 Primary Assembly 499 na contig000115 unplaced-scaffold na na PDYG01000114.1 = NZ_PDYG01000114.1 Primary Assembly 220 na contig000116 unplaced-scaffold na na PDYG01000115.1 = NZ_PDYG01000115.1 Primary Assembly 525 na contig000117 unplaced-scaffold na na PDYG01000116.1 = NZ_PDYG01000116.1 Primary Assembly 725 na contig000118 unplaced-scaffold na na PDYG01000117.1 = NZ_PDYG01000117.1 Primary Assembly 272 na contig000119 unplaced-scaffold na na PDYG01000118.1 = NZ_PDYG01000118.1 Primary Assembly 2567 na contig000120 unplaced-scaffold na na PDYG01000119.1 = NZ_PDYG01000119.1 Primary Assembly 328 na contig000121 unplaced-scaffold na na PDYG01000120.1 = NZ_PDYG01000120.1 Primary Assembly 264 na contig000122 unplaced-scaffold na na PDYG01000121.1 = NZ_PDYG01000121.1 Primary Assembly 324 na contig000123 unplaced-scaffold na na PDYG01000122.1 = NZ_PDYG01000122.1 Primary Assembly 220 na contig000124 unplaced-scaffold na na PDYG01000123.1 = NZ_PDYG01000123.1 Primary Assembly 131646 na contig000125 unplaced-scaffold na na PDYG01000124.1 = NZ_PDYG01000124.1 Primary Assembly 1020 na contig000126 unplaced-scaffold na na PDYG01000125.1 = NZ_PDYG01000125.1 Primary Assembly 395 na contig000127 unplaced-scaffold na na PDYG01000126.1 = NZ_PDYG01000126.1 Primary Assembly 304 na contig000128 unplaced-scaffold na na PDYG01000127.1 = NZ_PDYG01000127.1 Primary Assembly 27438 na contig000129 unplaced-scaffold na na PDYG01000128.1 = NZ_PDYG01000128.1 Primary Assembly 41590 na contig000130 unplaced-scaffold na na PDYG01000129.1 = NZ_PDYG01000129.1 Primary Assembly 8095 na contig000131 unplaced-scaffold na na PDYG01000130.1 = NZ_PDYG01000130.1 Primary Assembly 1148 na contig000132 unplaced-scaffold na na PDYG01000131.1 = NZ_PDYG01000131.1 Primary Assembly 328 na contig000133 unplaced-scaffold na na PDYG01000132.1 = NZ_PDYG01000132.1 Primary Assembly 239 na contig000134 unplaced-scaffold na na PDYG01000133.1 = NZ_PDYG01000133.1 Primary Assembly 231 na contig000135 unplaced-scaffold na na PDYG01000134.1 = NZ_PDYG01000134.1 Primary Assembly 186483 na contig000136 unplaced-scaffold na na PDYG01000135.1 = NZ_PDYG01000135.1 Primary Assembly 99048 na