# Assembly name: ASM287988v1 # Organism name: Trinickia dabaoshanensis (b-proteobacteria) # Infraspecific name: strain=GIMN1.004 # Taxid: 564714 # BioSample: SAMN08277010 # BioProject: PRJNA427927 # Submitter: The James Hutton Institute # Date: 2018-01-14 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: PNYA01 # Assembly method: SPAdes v. 3.7 # Expected final version: yes # Genome coverage: 47.6173x # Sequencing technology: Illumina HiSeq 2500 # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_002879885.1 # RefSeq assembly accession: GCF_002879885.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_002879915.1 GCF_002879915.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name NODE_1_length_433345_cov_18.7545 unplaced-scaffold na na PNYA01000001.1 = NZ_PNYA01000001.1 Primary Assembly 433345 na NODE_2_length_379817_cov_18.992 unplaced-scaffold na na PNYA01000002.1 = NZ_PNYA01000002.1 Primary Assembly 379817 na NODE_3_length_350473_cov_19.7809 unplaced-scaffold na na PNYA01000003.1 = NZ_PNYA01000003.1 Primary Assembly 350473 na NODE_4_length_292613_cov_17.8251 unplaced-scaffold na na PNYA01000004.1 = NZ_PNYA01000004.1 Primary Assembly 292613 na NODE_5_length_290755_cov_19.0117 unplaced-scaffold na na PNYA01000005.1 = NZ_PNYA01000005.1 Primary Assembly 290755 na NODE_6_length_288683_cov_19.5761 unplaced-scaffold na na PNYA01000006.1 = NZ_PNYA01000006.1 Primary Assembly 288683 na NODE_7_length_232609_cov_19.9303 unplaced-scaffold na na PNYA01000007.1 = NZ_PNYA01000007.1 Primary Assembly 232609 na NODE_8_length_232138_cov_17.9922 unplaced-scaffold na na PNYA01000008.1 = NZ_PNYA01000008.1 Primary Assembly 232138 na NODE_9_length_229032_cov_19.4224 unplaced-scaffold na na PNYA01000009.1 = NZ_PNYA01000009.1 Primary Assembly 229032 na NODE_10_length_225244_cov_19.7895 unplaced-scaffold na na PNYA01000010.1 = NZ_PNYA01000010.1 Primary Assembly 225244 na NODE_11_length_207303_cov_18.2781 unplaced-scaffold na na PNYA01000011.1 = NZ_PNYA01000011.1 Primary Assembly 207303 na NODE_12_length_205011_cov_19.2319 unplaced-scaffold na na PNYA01000012.1 = NZ_PNYA01000012.1 Primary Assembly 205011 na NODE_13_length_186667_cov_19.0147 unplaced-scaffold na na PNYA01000013.1 = NZ_PNYA01000013.1 Primary Assembly 186667 na NODE_14_length_175385_cov_18.4141 unplaced-scaffold na na PNYA01000014.1 = NZ_PNYA01000014.1 Primary Assembly 175385 na NODE_15_length_167106_cov_19.3644 unplaced-scaffold na na PNYA01000015.1 = NZ_PNYA01000015.1 Primary Assembly 167106 na NODE_16_length_163500_cov_19.2512 unplaced-scaffold na na PNYA01000016.1 = NZ_PNYA01000016.1 Primary Assembly 163500 na NODE_17_length_157903_cov_18.6501 unplaced-scaffold na na PNYA01000017.1 = NZ_PNYA01000017.1 Primary Assembly 157903 na NODE_18_length_155884_cov_19.266 unplaced-scaffold na na PNYA01000018.1 = NZ_PNYA01000018.1 Primary Assembly 155884 na NODE_19_length_151112_cov_19.1469 unplaced-scaffold na na PNYA01000019.1 = NZ_PNYA01000019.1 Primary Assembly 151112 na NODE_20_length_136994_cov_18.3082 unplaced-scaffold na na PNYA01000020.1 = NZ_PNYA01000020.1 Primary Assembly 136994 na NODE_21_length_136098_cov_18.7093 unplaced-scaffold na na PNYA01000021.1 = NZ_PNYA01000021.1 Primary Assembly 136098 na NODE_22_length_130428_cov_18.2513 unplaced-scaffold na na PNYA01000022.1 = NZ_PNYA01000022.1 Primary Assembly 130428 na NODE_23_length_129920_cov_18.8902 unplaced-scaffold na na PNYA01000023.1 = NZ_PNYA01000023.1 Primary Assembly 129920 na NODE_24_length_122994_cov_18.7976 unplaced-scaffold na na PNYA01000024.1 = NZ_PNYA01000024.1 Primary Assembly 122994 na NODE_25_length_120750_cov_18.2096 unplaced-scaffold na na PNYA01000025.1 = NZ_PNYA01000025.1 Primary Assembly 120750 na NODE_26_length_117277_cov_18.4291 unplaced-scaffold na na PNYA01000026.1 = NZ_PNYA01000026.1 Primary Assembly 117277 na NODE_27_length_113513_cov_19.0458 unplaced-scaffold na na PNYA01000027.1 = NZ_PNYA01000027.1 Primary Assembly 113513 na NODE_28_length_105173_cov_18.7962 unplaced-scaffold na na PNYA01000028.1 = NZ_PNYA01000028.1 Primary Assembly 105173 na NODE_29_length_102054_cov_19.8203 unplaced-scaffold na na PNYA01000029.1 = NZ_PNYA01000029.1 Primary Assembly 102054 na NODE_30_length_92058_cov_24.9115 unplaced-scaffold na na PNYA01000030.1 = NZ_PNYA01000030.1 Primary Assembly 92058 na NODE_31_length_89237_cov_20.6161 unplaced-scaffold na na PNYA01000031.1 = NZ_PNYA01000031.1 Primary Assembly 89237 na NODE_32_length_87501_cov_18.8737 unplaced-scaffold na na PNYA01000032.1 = NZ_PNYA01000032.1 Primary Assembly 87501 na NODE_33_length_83201_cov_18.8252 unplaced-scaffold na na PNYA01000033.1 = NZ_PNYA01000033.1 Primary Assembly 83201 na NODE_34_length_82919_cov_19.0658 unplaced-scaffold na na PNYA01000034.1 = NZ_PNYA01000034.1 Primary Assembly 82919 na NODE_35_length_80549_cov_19.243 unplaced-scaffold na na PNYA01000035.1 = NZ_PNYA01000035.1 Primary Assembly 80549 na NODE_36_length_74197_cov_18.4902 unplaced-scaffold na na PNYA01000036.1 = NZ_PNYA01000036.1 Primary Assembly 74197 na NODE_37_length_72897_cov_18.6216 unplaced-scaffold na na PNYA01000037.1 = NZ_PNYA01000037.1 Primary Assembly 72897 na NODE_38_length_72884_cov_19.4003 unplaced-scaffold na na PNYA01000038.1 = NZ_PNYA01000038.1 Primary Assembly 72884 na NODE_39_length_72512_cov_18.4758 unplaced-scaffold na na PNYA01000039.1 = NZ_PNYA01000039.1 Primary Assembly 72512 na NODE_40_length_69149_cov_18.6397 unplaced-scaffold na na PNYA01000040.1 = NZ_PNYA01000040.1 Primary Assembly 69149 na NODE_41_length_64310_cov_18.5215 unplaced-scaffold na na PNYA01000041.1 = NZ_PNYA01000041.1 Primary Assembly 64310 na NODE_42_length_63582_cov_18.4666 unplaced-scaffold na na PNYA01000042.1 = NZ_PNYA01000042.1 Primary Assembly 63582 na NODE_43_length_52568_cov_18.9541 unplaced-scaffold na na PNYA01000043.1 = NZ_PNYA01000043.1 Primary Assembly 52568 na NODE_44_length_45728_cov_20.3513 unplaced-scaffold na na PNYA01000044.1 = NZ_PNYA01000044.1 Primary Assembly 45728 na NODE_45_length_38998_cov_21.6931 unplaced-scaffold na na PNYA01000045.1 = NZ_PNYA01000045.1 Primary Assembly 38998 na NODE_46_length_33111_cov_20.2591 unplaced-scaffold na na PNYA01000046.1 = NZ_PNYA01000046.1 Primary Assembly 33111 na NODE_47_length_22245_cov_20.3235 unplaced-scaffold na na PNYA01000047.1 = NZ_PNYA01000047.1 Primary Assembly 22245 na NODE_48_length_20956_cov_17.1583 unplaced-scaffold na na PNYA01000048.1 = NZ_PNYA01000048.1 Primary Assembly 20956 na NODE_49_length_18485_cov_23.9259 unplaced-scaffold na na PNYA01000049.1 = NZ_PNYA01000049.1 Primary Assembly 18485 na NODE_50_length_11785_cov_21.6254 unplaced-scaffold na na PNYA01000050.1 = NZ_PNYA01000050.1 Primary Assembly 11785 na NODE_51_length_9385_cov_24.444 unplaced-scaffold na na PNYA01000051.1 = NZ_PNYA01000051.1 Primary Assembly 9385 na NODE_52_length_8886_cov_17.3513 unplaced-scaffold na na PNYA01000052.1 = NZ_PNYA01000052.1 Primary Assembly 8886 na NODE_53_length_7497_cov_21.122 unplaced-scaffold na na PNYA01000053.1 = NZ_PNYA01000053.1 Primary Assembly 7497 na NODE_54_length_5978_cov_19.7554 unplaced-scaffold na na PNYA01000054.1 = NZ_PNYA01000054.1 Primary Assembly 5978 na NODE_55_length_4904_cov_19.3228 unplaced-scaffold na na PNYA01000055.1 = NZ_PNYA01000055.1 Primary Assembly 4904 na NODE_56_length_4806_cov_21.1535 unplaced-scaffold na na PNYA01000056.1 = NZ_PNYA01000056.1 Primary Assembly 4806 na NODE_57_length_4733_cov_41.0143 unplaced-scaffold na na PNYA01000057.1 = NZ_PNYA01000057.1 Primary Assembly 4733 na NODE_58_length_4620_cov_20.1896 unplaced-scaffold na na PNYA01000058.1 = NZ_PNYA01000058.1 Primary Assembly 4620 na NODE_59_length_4483_cov_15.5618 unplaced-scaffold na na PNYA01000059.1 = NZ_PNYA01000059.1 Primary Assembly 4483 na NODE_60_length_3994_cov_15.8454 unplaced-scaffold na na PNYA01000060.1 = NZ_PNYA01000060.1 Primary Assembly 3994 na NODE_61_length_3659_cov_130.211 unplaced-scaffold na na PNYA01000061.1 = NZ_PNYA01000061.1 Primary Assembly 3659 na NODE_62_length_2655_cov_67.2892 unplaced-scaffold na na PNYA01000062.1 = NZ_PNYA01000062.1 Primary Assembly 2655 na NODE_63_length_2524_cov_23.0054 unplaced-scaffold na na PNYA01000063.1 = NZ_PNYA01000063.1 Primary Assembly 2524 na NODE_64_length_2402_cov_22.8404 unplaced-scaffold na na PNYA01000064.1 = NZ_PNYA01000064.1 Primary Assembly 2402 na NODE_65_length_2051_cov_31.3935 unplaced-scaffold na na PNYA01000065.1 = NZ_PNYA01000065.1 Primary Assembly 2051 na NODE_66_length_1999_cov_121.632 unplaced-scaffold na na PNYA01000066.1 = NZ_PNYA01000066.1 Primary Assembly 1999 na NODE_67_length_1701_cov_20.615 unplaced-scaffold na na PNYA01000067.1 = NZ_PNYA01000067.1 Primary Assembly 1701 na NODE_68_length_1671_cov_18.6561 unplaced-scaffold na na PNYA01000068.1 = NZ_PNYA01000068.1 Primary Assembly 1671 na NODE_69_length_1624_cov_29.0067 unplaced-scaffold na na PNYA01000069.1 = NZ_PNYA01000069.1 Primary Assembly 1624 na NODE_70_length_1576_cov_71.3837 unplaced-scaffold na na PNYA01000070.1 = NZ_PNYA01000070.1 Primary Assembly 1576 na NODE_71_length_1570_cov_39.0915 unplaced-scaffold na na PNYA01000071.1 = NZ_PNYA01000071.1 Primary Assembly 1570 na NODE_72_length_1523_cov_79.7507 unplaced-scaffold na na PNYA01000072.1 = NZ_PNYA01000072.1 Primary Assembly 1523 na NODE_73_length_1338_cov_91.5136 unplaced-scaffold na na PNYA01000073.1 = NZ_PNYA01000073.1 Primary Assembly 1338 na NODE_74_length_1319_cov_81.0529 unplaced-scaffold na na PNYA01000074.1 = NZ_PNYA01000074.1 Primary Assembly 1319 na NODE_75_length_1319_cov_83.3666 unplaced-scaffold na na PNYA01000075.1 = NZ_PNYA01000075.1 Primary Assembly 1319 na NODE_76_length_1304_cov_11.7222 unplaced-scaffold na na PNYA01000076.1 = NZ_PNYA01000076.1 Primary Assembly 1304 na NODE_77_length_1287_cov_39.5802 unplaced-scaffold na na PNYA01000077.1 = NZ_PNYA01000077.1 Primary Assembly 1287 na NODE_78_length_1268_cov_80.7388 unplaced-scaffold na na PNYA01000078.1 = NZ_PNYA01000078.1 Primary Assembly 1268 na NODE_79_length_1152_cov_40.04 unplaced-scaffold na na PNYA01000079.1 = NZ_PNYA01000079.1 Primary Assembly 1152 na NODE_80_length_1081_cov_20.7662 unplaced-scaffold na na PNYA01000080.1 = NZ_PNYA01000080.1 Primary Assembly 1081 na NODE_81_length_1079_cov_42.4181 unplaced-scaffold na na PNYA01000081.1 = NZ_PNYA01000081.1 Primary Assembly 1079 na NODE_82_length_1062_cov_18.5187 unplaced-scaffold na na PNYA01000082.1 = NZ_PNYA01000082.1 Primary Assembly 1062 na NODE_83_length_724_cov_25.1457 unplaced-scaffold na na PNYA01000083.1 = NZ_PNYA01000083.1 Primary Assembly 724 na NODE_84_length_632_cov_23.9347 unplaced-scaffold na na PNYA01000084.1 = NZ_PNYA01000084.1 Primary Assembly 632 na NODE_85_length_474_cov_0.711816 unplaced-scaffold na na PNYA01000085.1 = NZ_PNYA01000085.1 Primary Assembly 474 na NODE_86_length_469_cov_0.722222 unplaced-scaffold na na PNYA01000086.1 = NZ_PNYA01000086.1 Primary Assembly 469 na NODE_87_length_447_cov_0.75 unplaced-scaffold na na PNYA01000087.1 = NZ_PNYA01000087.1 Primary Assembly 447 na NODE_88_length_445_cov_0.748428 unplaced-scaffold na na PNYA01000088.1 = NZ_PNYA01000088.1 Primary Assembly 445 na NODE_89_length_441_cov_0.687898 unplaced-scaffold na na PNYA01000089.1 = NZ_PNYA01000089.1 Primary Assembly 441 na NODE_90_length_434_cov_0.807818 unplaced-scaffold na na PNYA01000090.1 = NZ_PNYA01000090.1 Primary Assembly 434 na NODE_91_length_406_cov_0.784946 unplaced-scaffold na na PNYA01000091.1 = NZ_PNYA01000091.1 Primary Assembly 406 na NODE_92_length_403_cov_25.0254 unplaced-scaffold na na PNYA01000092.1 = NZ_PNYA01000092.1 Primary Assembly 403 na NODE_94_length_395_cov_0.66791 unplaced-scaffold na na PNYA01000093.1 = NZ_PNYA01000093.1 Primary Assembly 395 na NODE_95_length_394_cov_0.928839 unplaced-scaffold na na PNYA01000094.1 = NZ_PNYA01000094.1 Primary Assembly 394 na NODE_96_length_394_cov_0.917603 unplaced-scaffold na na PNYA01000095.1 = NZ_PNYA01000095.1 Primary Assembly 394 na NODE_97_length_391_cov_0.75 unplaced-scaffold na na PNYA01000096.1 = NZ_PNYA01000096.1 Primary Assembly 391 na NODE_98_length_362_cov_42.7702 unplaced-scaffold na na PNYA01000097.1 = NZ_PNYA01000097.1 Primary Assembly 362 na NODE_99_length_309_cov_62.544 unplaced-scaffold na na PNYA01000098.1 = NZ_PNYA01000098.1 Primary Assembly 309 na NODE_100_length_254_cov_24.6457 unplaced-scaffold na na PNYA01000099.1 = NZ_PNYA01000099.1 Primary Assembly 254 na NODE_101_length_253_cov_24.9365 unplaced-scaffold na na PNYA01000100.1 = NZ_PNYA01000100.1 Primary Assembly 253 na NODE_102_length_250_cov_33 unplaced-scaffold na na PNYA01000101.1 = NZ_PNYA01000101.1 Primary Assembly 250 na NODE_103_length_250_cov_166.959 unplaced-scaffold na na PNYA01000102.1 = NZ_PNYA01000102.1 Primary Assembly 250 na