# Assembly name: ASM291669v1 # Organism name: Alkalispirochaeta sphaeroplastigenens (spirochetes) # Infraspecific name: strain=JC133 # Taxid: 1187066 # BioSample: SAMN04348345 # BioProject: PRJNA306207 # Submitter: UoH # Date: 2018-02-05 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: LPWH01 # Assembly method: MaSuRCA v. 2013 # Expected final version: yes # Genome coverage: 150.0x # Sequencing technology: Illumina HiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_002916695.1 # RefSeq assembly accession: GCF_002916695.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_002916735.1 GCF_002916735.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name ctg7180000003803 unplaced-scaffold na na LPWH01000001.1 = NZ_LPWH01000001.1 Primary Assembly 132569 na ctg7180000003804 unplaced-scaffold na na LPWH01000002.1 = NZ_LPWH01000002.1 Primary Assembly 125804 na ctg7180000003805 unplaced-scaffold na na LPWH01000003.1 = NZ_LPWH01000003.1 Primary Assembly 107071 na ctg7180000003806 unplaced-scaffold na na LPWH01000004.1 = NZ_LPWH01000004.1 Primary Assembly 116687 na ctg7180000003808 unplaced-scaffold na na LPWH01000005.1 = NZ_LPWH01000005.1 Primary Assembly 55199 na ctg7180000003809 unplaced-scaffold na na LPWH01000006.1 = NZ_LPWH01000006.1 Primary Assembly 43186 na ctg7180000003810 unplaced-scaffold na na LPWH01000007.1 = NZ_LPWH01000007.1 Primary Assembly 47579 na ctg7180000003811 unplaced-scaffold na na LPWH01000008.1 = NZ_LPWH01000008.1 Primary Assembly 20886 na ctg7180000003812 unplaced-scaffold na na LPWH01000009.1 = NZ_LPWH01000009.1 Primary Assembly 27560 na ctg7180000003813 unplaced-scaffold na na LPWH01000010.1 = NZ_LPWH01000010.1 Primary Assembly 17954 na ctg7180000003814 unplaced-scaffold na na LPWH01000011.1 = NZ_LPWH01000011.1 Primary Assembly 13360 na ctg7180000003815 unplaced-scaffold na na LPWH01000012.1 = NZ_LPWH01000012.1 Primary Assembly 9271 na ctg7180000003816 unplaced-scaffold na na LPWH01000013.1 = NZ_LPWH01000013.1 Primary Assembly 1771 na ctg7180000003817 unplaced-scaffold na na LPWH01000014.1 = NZ_LPWH01000014.1 Primary Assembly 8389 na ctg7180000003818 unplaced-scaffold na na LPWH01000015.1 = NZ_LPWH01000015.1 Primary Assembly 14043 na ctg7180000003819 unplaced-scaffold na na LPWH01000016.1 = NZ_LPWH01000016.1 Primary Assembly 13117 na ctg7180000003820 unplaced-scaffold na na LPWH01000017.1 = NZ_LPWH01000017.1 Primary Assembly 11803 na ctg7180000003821 unplaced-scaffold na na LPWH01000018.1 = NZ_LPWH01000018.1 Primary Assembly 6118 na ctg7180000003822 unplaced-scaffold na na LPWH01000019.1 = NZ_LPWH01000019.1 Primary Assembly 8044 na ctg7180000003823 unplaced-scaffold na na LPWH01000020.1 = NZ_LPWH01000020.1 Primary Assembly 3120 na ctg7180000003826 unplaced-scaffold na na LPWH01000021.1 = NZ_LPWH01000021.1 Primary Assembly 3890 na ctg7180000003829 unplaced-scaffold na na LPWH01000022.1 = NZ_LPWH01000022.1 Primary Assembly 3090 na ctg7180000003834 unplaced-scaffold na na LPWH01000023.1 = NZ_LPWH01000023.1 Primary Assembly 2386 na ctg7180000003839 unplaced-scaffold na na LPWH01000024.1 = NZ_LPWH01000024.1 Primary Assembly 2915 na ctg7180000003840 unplaced-scaffold na na LPWH01000025.1 = NZ_LPWH01000025.1 Primary Assembly 2915 na ctg7180000003844 unplaced-scaffold na na LPWH01000026.1 = NZ_LPWH01000026.1 Primary Assembly 1035 na ctg7180000003847 unplaced-scaffold na na LPWH01000027.1 = NZ_LPWH01000027.1 Primary Assembly 584 na ctg7180000003864 unplaced-scaffold na na LPWH01000028.1 = NZ_LPWH01000028.1 Primary Assembly 1274 na ctg7180000003866 unplaced-scaffold na na LPWH01000029.1 = NZ_LPWH01000029.1 Primary Assembly 1443 na ctg7180000003869 unplaced-scaffold na na LPWH01000030.1 = NZ_LPWH01000030.1 Primary Assembly 1311 na ctg7180000003881 unplaced-scaffold na na LPWH01000031.1 = NZ_LPWH01000031.1 Primary Assembly 706 na ctg7180000003888 unplaced-scaffold na na LPWH01000032.1 = NZ_LPWH01000032.1 Primary Assembly 571 na ctg7180000003889 unplaced-scaffold na na LPWH01000033.1 = NZ_LPWH01000033.1 Primary Assembly 563 na ctg7180000003891 unplaced-scaffold na na LPWH01000034.1 = NZ_LPWH01000034.1 Primary Assembly 548 na ctg7180000003903 unplaced-scaffold na na LPWH01000035.1 = NZ_LPWH01000035.1 Primary Assembly 491 na ctg7180000003908 unplaced-scaffold na na LPWH01000036.1 = NZ_LPWH01000036.1 Primary Assembly 466 na ctg7180000003911 unplaced-scaffold na na LPWH01000037.1 = NZ_LPWH01000037.1 Primary Assembly 451 na ctg7180000003915 unplaced-scaffold na na LPWH01000038.1 = NZ_LPWH01000038.1 Primary Assembly 421 na ctg7180000003917 unplaced-scaffold na na LPWH01000039.1 = NZ_LPWH01000039.1 Primary Assembly 412 na ctg7180000003919 unplaced-scaffold na na LPWH01000040.1 = NZ_LPWH01000040.1 Primary Assembly 397 na ctg7180000003924 unplaced-scaffold na na LPWH01000041.1 = NZ_LPWH01000041.1 Primary Assembly 388 na ctg7180000003929 unplaced-scaffold na na LPWH01000042.1 = NZ_LPWH01000042.1 Primary Assembly 376 na ctg7180000003931 unplaced-scaffold na na LPWH01000043.1 = NZ_LPWH01000043.1 Primary Assembly 353 na ctg7180000003933 unplaced-scaffold na na LPWH01000044.1 = NZ_LPWH01000044.1 Primary Assembly 348 na ctg7180000003935 unplaced-scaffold na na LPWH01000045.1 = NZ_LPWH01000045.1 Primary Assembly 341 na ctg7180000003936 unplaced-scaffold na na LPWH01000046.1 = NZ_LPWH01000046.1 Primary Assembly 340 na ctg7180000003939 unplaced-scaffold na na LPWH01000047.1 = NZ_LPWH01000047.1 Primary Assembly 334 na ctg7180000003946 unplaced-scaffold na na LPWH01000048.1 = NZ_LPWH01000048.1 Primary Assembly 317 na ctg7180000005628 unplaced-scaffold na na LPWH01000049.1 = NZ_LPWH01000049.1 Primary Assembly 111766 na ctg7180000005629 unplaced-scaffold na na LPWH01000050.1 = NZ_LPWH01000050.1 Primary Assembly 79736 na ctg7180000005630 unplaced-scaffold na na LPWH01000051.1 = NZ_LPWH01000051.1 Primary Assembly 95244 na ctg7180000005631 unplaced-scaffold na na LPWH01000052.1 = NZ_LPWH01000052.1 Primary Assembly 63415 na ctg7180000005632 unplaced-scaffold na na LPWH01000053.1 = NZ_LPWH01000053.1 Primary Assembly 35838 na ctg7180000005633 unplaced-scaffold na na LPWH01000054.1 = NZ_LPWH01000054.1 Primary Assembly 55023 na ctg7180000005634 unplaced-scaffold na na LPWH01000055.1 = NZ_LPWH01000055.1 Primary Assembly 115962 na ctg7180000005635 unplaced-scaffold na na LPWH01000056.1 = NZ_LPWH01000056.1 Primary Assembly 24690 na ctg7180000005636 unplaced-scaffold na na LPWH01000057.1 = NZ_LPWH01000057.1 Primary Assembly 10109 na ctg7180000005637 unplaced-scaffold na na LPWH01000058.1 = NZ_LPWH01000058.1 Primary Assembly 16120 na ctg7180000005638 unplaced-scaffold na na LPWH01000059.1 = NZ_LPWH01000059.1 Primary Assembly 1381 na ctg7180000005640 unplaced-scaffold na na LPWH01000060.1 = NZ_LPWH01000060.1 Primary Assembly 3823 na ctg7180000005641 unplaced-scaffold na na LPWH01000061.1 = NZ_LPWH01000061.1 Primary Assembly 614 na ctg7180000005642 unplaced-scaffold na na LPWH01000062.1 = NZ_LPWH01000062.1 Primary Assembly 146719 na ctg7180000005643 unplaced-scaffold na na LPWH01000063.1 = NZ_LPWH01000063.1 Primary Assembly 118725 na ctg7180000005644 unplaced-scaffold na na LPWH01000064.1 = NZ_LPWH01000064.1 Primary Assembly 80616 na ctg7180000005645 unplaced-scaffold na na LPWH01000065.1 = NZ_LPWH01000065.1 Primary Assembly 44598 na ctg7180000005646 unplaced-scaffold na na LPWH01000066.1 = NZ_LPWH01000066.1 Primary Assembly 47424 na ctg7180000005647 unplaced-scaffold na na LPWH01000067.1 = NZ_LPWH01000067.1 Primary Assembly 109999 na ctg7180000005648 unplaced-scaffold na na LPWH01000068.1 = NZ_LPWH01000068.1 Primary Assembly 35370 na ctg7180000005649 unplaced-scaffold na na LPWH01000069.1 = NZ_LPWH01000069.1 Primary Assembly 29762 na ctg7180000005650 unplaced-scaffold na na LPWH01000070.1 = NZ_LPWH01000070.1 Primary Assembly 110098 na ctg7180000005651 unplaced-scaffold na na LPWH01000071.1 = NZ_LPWH01000071.1 Primary Assembly 36450 na ctg7180000005652 unplaced-scaffold na na LPWH01000072.1 = NZ_LPWH01000072.1 Primary Assembly 19797 na ctg7180000005653 unplaced-scaffold na na LPWH01000073.1 = NZ_LPWH01000073.1 Primary Assembly 18571 na ctg7180000005654 unplaced-scaffold na na LPWH01000074.1 = NZ_LPWH01000074.1 Primary Assembly 17763 na ctg7180000005655 unplaced-scaffold na na LPWH01000075.1 = NZ_LPWH01000075.1 Primary Assembly 16522 na ctg7180000005656 unplaced-scaffold na na LPWH01000076.1 = NZ_LPWH01000076.1 Primary Assembly 11294 na ctg7180000005657 unplaced-scaffold na na LPWH01000077.1 = NZ_LPWH01000077.1 Primary Assembly 11037 na ctg7180000005658 unplaced-scaffold na na LPWH01000078.1 = NZ_LPWH01000078.1 Primary Assembly 7284 na ctg7180000005659 unplaced-scaffold na na LPWH01000079.1 = NZ_LPWH01000079.1 Primary Assembly 8558 na ctg7180000005660 unplaced-scaffold na na LPWH01000080.1 = NZ_LPWH01000080.1 Primary Assembly 5227 na ctg7180000005661 unplaced-scaffold na na LPWH01000081.1 = NZ_LPWH01000081.1 Primary Assembly 8116 na ctg7180000005662 unplaced-scaffold na na LPWH01000082.1 = NZ_LPWH01000082.1 Primary Assembly 4078 na ctg7180000005663 unplaced-scaffold na na LPWH01000083.1 = NZ_LPWH01000083.1 Primary Assembly 1482 na ctg7180000005664 unplaced-scaffold na na LPWH01000084.1 = NZ_LPWH01000084.1 Primary Assembly 700 na ctg7180000005665 unplaced-scaffold na na LPWH01000085.1 = NZ_LPWH01000085.1 Primary Assembly 3534 na ctg7180000005666 unplaced-scaffold na na LPWH01000086.1 = NZ_LPWH01000086.1 Primary Assembly 1436 na ctg7180000005667 unplaced-scaffold na na LPWH01000087.1 = NZ_LPWH01000087.1 Primary Assembly 1530 na ctg7180000005668 unplaced-scaffold na na LPWH01000088.1 = NZ_LPWH01000088.1 Primary Assembly 2722 na ctg7180000005669 unplaced-scaffold na na LPWH01000089.1 = NZ_LPWH01000089.1 Primary Assembly 2803 na ctg7180000005670 unplaced-scaffold na na LPWH01000090.1 = NZ_LPWH01000090.1 Primary Assembly 1509 na ctg7180000005671 unplaced-scaffold na na LPWH01000091.1 = NZ_LPWH01000091.1 Primary Assembly 817 na ctg7180000005672 unplaced-scaffold na na LPWH01000092.1 = NZ_LPWH01000092.1 Primary Assembly 666 na ctg7180000005673 unplaced-scaffold na na LPWH01000093.1 = NZ_LPWH01000093.1 Primary Assembly 71742 na ctg7180000005674 unplaced-scaffold na na LPWH01000094.1 = NZ_LPWH01000094.1 Primary Assembly 1594 na ctg7180000005675 unplaced-scaffold na na LPWH01000095.1 = NZ_LPWH01000095.1 Primary Assembly 1555 na ctg7180000005676 unplaced-scaffold na na LPWH01000096.1 = NZ_LPWH01000096.1 Primary Assembly 1244 na ctg7180000005677 unplaced-scaffold na na LPWH01000097.1 = NZ_LPWH01000097.1 Primary Assembly 2960 na ctg7180000005678 unplaced-scaffold na na LPWH01000098.1 = NZ_LPWH01000098.1 Primary Assembly 1211 na ctg7180000005679 unplaced-scaffold na na LPWH01000099.1 = NZ_LPWH01000099.1 Primary Assembly 904 na ctg7180000005680 unplaced-scaffold na na LPWH01000100.1 = NZ_LPWH01000100.1 Primary Assembly 804 na ctg7180000005682 unplaced-scaffold na na LPWH01000101.1 = NZ_LPWH01000101.1 Primary Assembly 795 na ctg7180000005684 unplaced-scaffold na na LPWH01000102.1 = NZ_LPWH01000102.1 Primary Assembly 548 na ctg7180000005686 unplaced-scaffold na na LPWH01000103.1 = NZ_LPWH01000103.1 Primary Assembly 915 na ctg7180000005687 unplaced-scaffold na na LPWH01000104.1 = NZ_LPWH01000104.1 Primary Assembly 467 na ctg7180000005688 unplaced-scaffold na na LPWH01000105.1 = NZ_LPWH01000105.1 Primary Assembly 601 na ctg7180000005689 unplaced-scaffold na na LPWH01000106.1 = NZ_LPWH01000106.1 Primary Assembly 401 na ctg7180000005690 unplaced-scaffold na na LPWH01000107.1 = NZ_LPWH01000107.1 Primary Assembly 965 na ctg7180000005691 unplaced-scaffold na na LPWH01000108.1 = NZ_LPWH01000108.1 Primary Assembly 349 na ctg7180000005692 unplaced-scaffold na na LPWH01000109.1 = NZ_LPWH01000109.1 Primary Assembly 876 na ctg7180000005693 unplaced-scaffold na na LPWH01000110.1 = NZ_LPWH01000110.1 Primary Assembly 52044 na ctg7180000005694 unplaced-scaffold na na LPWH01000111.1 = NZ_LPWH01000111.1 Primary Assembly 92276 na ctg7180000005695 unplaced-scaffold na na LPWH01000112.1 = NZ_LPWH01000112.1 Primary Assembly 146173 na ctg7180000005696 unplaced-scaffold na na LPWH01000113.1 = NZ_LPWH01000113.1 Primary Assembly 7454 na ctg7180000005697 unplaced-scaffold na na LPWH01000114.1 = NZ_LPWH01000114.1 Primary Assembly 2380 na ctg7180000005698 unplaced-scaffold na na LPWH01000115.1 = NZ_LPWH01000115.1 Primary Assembly 1007 na ctg7180000005699 unplaced-scaffold na na LPWH01000116.1 = NZ_LPWH01000116.1 Primary Assembly 3224 na ctg7180000005700 unplaced-scaffold na na LPWH01000117.1 = NZ_LPWH01000117.1 Primary Assembly 127206 na ctg7180000005701 unplaced-scaffold na na LPWH01000118.1 = NZ_LPWH01000118.1 Primary Assembly 57101 na ctg7180000005702 unplaced-scaffold na na LPWH01000119.1 = NZ_LPWH01000119.1 Primary Assembly 1069 na ctg7180000005703 unplaced-scaffold na na LPWH01000120.1 = NZ_LPWH01000120.1 Primary Assembly 2161 na ctg7180000005704 unplaced-scaffold na na LPWH01000121.1 = NZ_LPWH01000121.1 Primary Assembly 32921 na ctg7180000005705 unplaced-scaffold na na LPWH01000122.1 = NZ_LPWH01000122.1 Primary Assembly 145308 na ctg7180000005706 unplaced-scaffold na na LPWH01000123.1 = NZ_LPWH01000123.1 Primary Assembly 86262 na ctg7180000005707 unplaced-scaffold na na LPWH01000124.1 = NZ_LPWH01000124.1 Primary Assembly 62765 na ctg7180000005708 unplaced-scaffold na na LPWH01000125.1 = NZ_LPWH01000125.1 Primary Assembly 2232 na ctg7180000005709 unplaced-scaffold na na LPWH01000126.1 = NZ_LPWH01000126.1 Primary Assembly 46170 na ctg7180000005710 unplaced-scaffold na na LPWH01000127.1 = NZ_LPWH01000127.1 Primary Assembly 33732 na ctg7180000005711 unplaced-scaffold na na LPWH01000128.1 = NZ_LPWH01000128.1 Primary Assembly 1738 na ctg7180000005712 unplaced-scaffold na na LPWH01000129.1 = NZ_LPWH01000129.1 Primary Assembly 32604 na