# Assembly name: ASM293012v1 # Organism name: Coxiella endosymbiont of Rhipicephalus microplus (g-proteobacteria) # Infraspecific name: strain=CLE-RmD # Taxid: 1656186 # BioSample: SAMN08152909 # BioProject: PRJNA421734 # Submitter: Centers for Disease Control and Prevention # Date: 2018-02-15 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: DLUJ01 # Assembly method: SPAdes v. 3.10.1; Velvet v. 1.2.10; CLC Genomics Workbench v. 9.5.2; CISA v. 1.3 # Expected final version: yes # Genome coverage: 232.0x # Sequencing technology: Illumina HiSeq; 454 # RefSeq category: Reference Genome # GenBank assembly accession: GCA_002930125.1 # RefSeq assembly accession: GCF_002930125.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_002930135.1 GCF_002930135.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name CLE-Rm_scaffold1 unplaced-scaffold na na DLUJ01000001.1 = NZ_DLUJ01000001.1 Primary Assembly 9739 na CLE-Rm_scaffold2 unplaced-scaffold na na DLUJ01000002.1 = NZ_DLUJ01000002.1 Primary Assembly 19414 na CLE-Rm_scaffold3 unplaced-scaffold na na DLUJ01000003.1 = NZ_DLUJ01000003.1 Primary Assembly 57415 na CLE-Rm_scaffold4 unplaced-scaffold na na DLUJ01000004.1 = NZ_DLUJ01000004.1 Primary Assembly 1257 na CLE-Rm_scaffold5 unplaced-scaffold na na DLUJ01000005.1 = NZ_DLUJ01000005.1 Primary Assembly 6963 na CLE-Rm_scaffold6 unplaced-scaffold na na DLUJ01000006.1 = NZ_DLUJ01000006.1 Primary Assembly 298 na CLE-Rm_scaffold7 unplaced-scaffold na na DLUJ01000007.1 = NZ_DLUJ01000007.1 Primary Assembly 11742 na CLE-Rm_scaffold8 unplaced-scaffold na na DLUJ01000008.1 = NZ_DLUJ01000008.1 Primary Assembly 15725 na CLE-Rm_scaffold9 unplaced-scaffold na na DLUJ01000009.1 = NZ_DLUJ01000009.1 Primary Assembly 20471 na CLE-Rm_scaffold10 unplaced-scaffold na na DLUJ01000010.1 = NZ_DLUJ01000010.1 Primary Assembly 565 na CLE-Rm_scaffold11 unplaced-scaffold na na DLUJ01000011.1 = NZ_DLUJ01000011.1 Primary Assembly 5464 na CLE-Rm_scaffold12 unplaced-scaffold na na DLUJ01000012.1 = NZ_DLUJ01000012.1 Primary Assembly 1644 na CLE-Rm_scaffold13 unplaced-scaffold na na DLUJ01000013.1 = NZ_DLUJ01000013.1 Primary Assembly 12586 na CLE-Rm_scaffold14 unplaced-scaffold na na DLUJ01000014.1 = NZ_DLUJ01000014.1 Primary Assembly 5622 na CLE-Rm_scaffold15 unplaced-scaffold na na DLUJ01000015.1 = NZ_DLUJ01000015.1 Primary Assembly 29034 na CLE-Rm_scaffold16 unplaced-scaffold na na DLUJ01000016.1 = NZ_DLUJ01000016.1 Primary Assembly 1675 na CLE-Rm_scaffold17 unplaced-scaffold na na DLUJ01000017.1 = NZ_DLUJ01000017.1 Primary Assembly 52283 na CLE-Rm_scaffold18 unplaced-scaffold na na DLUJ01000018.1 = NZ_DLUJ01000018.1 Primary Assembly 2457 na CLE-Rm_scaffold19 unplaced-scaffold na na DLUJ01000019.1 = NZ_DLUJ01000019.1 Primary Assembly 14298 na CLE-Rm_scaffold20 unplaced-scaffold na na DLUJ01000020.1 = NZ_DLUJ01000020.1 Primary Assembly 1516 na CLE-Rm_scaffold21 unplaced-scaffold na na DLUJ01000021.1 = NZ_DLUJ01000021.1 Primary Assembly 12437 na CLE-Rm_scaffold22 unplaced-scaffold na na DLUJ01000022.1 = NZ_DLUJ01000022.1 Primary Assembly 6788 na CLE-Rm_scaffold23 unplaced-scaffold na na DLUJ01000023.1 = NZ_DLUJ01000023.1 Primary Assembly 21153 na CLE-Rm_scaffold24 unplaced-scaffold na na DLUJ01000024.1 = NZ_DLUJ01000024.1 Primary Assembly 10645 na CLE-Rm_scaffold25 unplaced-scaffold na na DLUJ01000025.1 = NZ_DLUJ01000025.1 Primary Assembly 1757 na CLE-Rm_scaffold26 unplaced-scaffold na na DLUJ01000026.1 = NZ_DLUJ01000026.1 Primary Assembly 1917 na CLE-Rm_scaffold27 unplaced-scaffold na na DLUJ01000027.1 = NZ_DLUJ01000027.1 Primary Assembly 15562 na CLE-Rm_scaffold28 unplaced-scaffold na na DLUJ01000028.1 = NZ_DLUJ01000028.1 Primary Assembly 2357 na CLE-Rm_scaffold29 unplaced-scaffold na na DLUJ01000029.1 = NZ_DLUJ01000029.1 Primary Assembly 13685 na CLE-Rm_scaffold30 unplaced-scaffold na na DLUJ01000030.1 = NZ_DLUJ01000030.1 Primary Assembly 9327 na CLE-Rm_scaffold31 unplaced-scaffold na na DLUJ01000031.1 = NZ_DLUJ01000031.1 Primary Assembly 10889 na CLE-Rm_scaffold32 unplaced-scaffold na na DLUJ01000032.1 = NZ_DLUJ01000032.1 Primary Assembly 1071 na CLE-Rm_scaffold33 unplaced-scaffold na na DLUJ01000033.1 = NZ_DLUJ01000033.1 Primary Assembly 25198 na CLE-Rm_scaffold34 unplaced-scaffold na na DLUJ01000034.1 = NZ_DLUJ01000034.1 Primary Assembly 1241 na CLE-Rm_scaffold35 unplaced-scaffold na na DLUJ01000035.1 = NZ_DLUJ01000035.1 Primary Assembly 5049 na CLE-Rm_scaffold36 unplaced-scaffold na na DLUJ01000036.1 = NZ_DLUJ01000036.1 Primary Assembly 22578 na CLE-Rm_scaffold37 unplaced-scaffold na na DLUJ01000037.1 = NZ_DLUJ01000037.1 Primary Assembly 9062 na CLE-Rm_scaffold38 unplaced-scaffold na na DLUJ01000038.1 = NZ_DLUJ01000038.1 Primary Assembly 13454 na CLE-Rm_scaffold39 unplaced-scaffold na na DLUJ01000039.1 = NZ_DLUJ01000039.1 Primary Assembly 34786 na CLE-Rm_scaffold40 unplaced-scaffold na na DLUJ01000040.1 = NZ_DLUJ01000040.1 Primary Assembly 73511 na CLE-Rm_scaffold41 unplaced-scaffold na na DLUJ01000041.1 = NZ_DLUJ01000041.1 Primary Assembly 27495 na CLE-Rm_scaffold42 unplaced-scaffold na na DLUJ01000042.1 = NZ_DLUJ01000042.1 Primary Assembly 1185 na CLE-Rm_scaffold43 unplaced-scaffold na na DLUJ01000043.1 = NZ_DLUJ01000043.1 Primary Assembly 18800 na CLE-Rm_scaffold44 unplaced-scaffold na na DLUJ01000044.1 = NZ_DLUJ01000044.1 Primary Assembly 893 na CLE-Rm_scaffold45 unplaced-scaffold na na DLUJ01000045.1 = NZ_DLUJ01000045.1 Primary Assembly 24066 na CLE-Rm_scaffold46 unplaced-scaffold na na DLUJ01000046.1 = NZ_DLUJ01000046.1 Primary Assembly 311 na CLE-Rm_scaffold47 unplaced-scaffold na na DLUJ01000047.1 = NZ_DLUJ01000047.1 Primary Assembly 900 na CLE-Rm_scaffold48 unplaced-scaffold na na DLUJ01000048.1 = NZ_DLUJ01000048.1 Primary Assembly 13885 na CLE-Rm_scaffold49 unplaced-scaffold na na DLUJ01000049.1 = NZ_DLUJ01000049.1 Primary Assembly 1323 na CLE-Rm_scaffold50 unplaced-scaffold na na DLUJ01000050.1 = NZ_DLUJ01000050.1 Primary Assembly 7203 na CLE-Rm_scaffold51 unplaced-scaffold na na DLUJ01000051.1 = NZ_DLUJ01000051.1 Primary Assembly 2640 na CLE-Rm_scaffold52 unplaced-scaffold na na DLUJ01000052.1 = NZ_DLUJ01000052.1 Primary Assembly 39503 na CLE-Rm_scaffold53 unplaced-scaffold na na DLUJ01000053.1 = NZ_DLUJ01000053.1 Primary Assembly 529 na CLE-Rm_scaffold54 unplaced-scaffold na na DLUJ01000054.1 = NZ_DLUJ01000054.1 Primary Assembly 17020 na CLE-Rm_scaffold55 unplaced-scaffold na na DLUJ01000055.1 = NZ_DLUJ01000055.1 Primary Assembly 19896 na CLE-Rm_scaffold56 unplaced-scaffold na na DLUJ01000056.1 = NZ_DLUJ01000056.1 Primary Assembly 16914 na CLE-Rm_scaffold57 unplaced-scaffold na na DLUJ01000057.1 = NZ_DLUJ01000057.1 Primary Assembly 1201 na CLE-Rm_scaffold58 unplaced-scaffold na na DLUJ01000058.1 = NZ_DLUJ01000058.1 Primary Assembly 32247 na CLE-Rm_scaffold59 unplaced-scaffold na na DLUJ01000059.1 = NZ_DLUJ01000059.1 Primary Assembly 58152 na CLE-Rm_scaffold60 unplaced-scaffold na na DLUJ01000060.1 = NZ_DLUJ01000060.1 Primary Assembly 8394 na CLE-Rm_scaffold61 unplaced-scaffold na na DLUJ01000061.1 = NZ_DLUJ01000061.1 Primary Assembly 2525 na CLE-Rm_scaffold62 unplaced-scaffold na na DLUJ01000062.1 = NZ_DLUJ01000062.1 Primary Assembly 5601 na CLE-Rm_scaffold63 unplaced-scaffold na na DLUJ01000063.1 = NZ_DLUJ01000063.1 Primary Assembly 10044 na CLE-Rm_scaffold64 unplaced-scaffold na na DLUJ01000064.1 = NZ_DLUJ01000064.1 Primary Assembly 2615 na CLE-Rm_scaffold65 unplaced-scaffold na na DLUJ01000065.1 = NZ_DLUJ01000065.1 Primary Assembly 2168 na CLE-Rm_scaffold66 unplaced-scaffold na na DLUJ01000066.1 = NZ_DLUJ01000066.1 Primary Assembly 40191 na CLE-Rm_scaffold67 unplaced-scaffold na na DLUJ01000067.1 = NZ_DLUJ01000067.1 Primary Assembly 30231 na CLE-Rm_scaffold68 unplaced-scaffold na na DLUJ01000068.1 = NZ_DLUJ01000068.1 Primary Assembly 9462 na CLE-Rm_scaffold69 unplaced-scaffold na na DLUJ01000069.1 = NZ_DLUJ01000069.1 Primary Assembly 10480 na CLE-Rm_scaffold70 unplaced-scaffold na na DLUJ01000070.1 = NZ_DLUJ01000070.1 Primary Assembly 886 na CLE-Rm_scaffold71 unplaced-scaffold na na DLUJ01000071.1 = NZ_DLUJ01000071.1 Primary Assembly 1476 na CLE-Rm_scaffold72 unplaced-scaffold na na DLUJ01000072.1 = NZ_DLUJ01000072.1 Primary Assembly 2004 na CLE-Rm_scaffold73 unplaced-scaffold na na DLUJ01000073.1 = NZ_DLUJ01000073.1 Primary Assembly 25793 na CLE-Rm_scaffold74 unplaced-scaffold na na DLUJ01000074.1 = NZ_DLUJ01000074.1 Primary Assembly 18335 na CLE-Rm_scaffold75 unplaced-scaffold na na DLUJ01000075.1 = NZ_DLUJ01000075.1 Primary Assembly 837 na CLE-Rm_scaffold76 unplaced-scaffold na na DLUJ01000076.1 = NZ_DLUJ01000076.1 Primary Assembly 32044 na CLE-Rm_scaffold77 unplaced-scaffold na na DLUJ01000077.1 = NZ_DLUJ01000077.1 Primary Assembly 2320 na CLE-Rm_scaffold78 unplaced-scaffold na na DLUJ01000078.1 = NZ_DLUJ01000078.1 Primary Assembly 1205 na CLE-Rm_scaffold79 unplaced-scaffold na na DLUJ01000079.1 = NZ_DLUJ01000079.1 Primary Assembly 2910 na CLE-Rm_scaffold80 unplaced-scaffold na na DLUJ01000080.1 = NZ_DLUJ01000080.1 Primary Assembly 12438 na CLE-Rm_scaffold81 unplaced-scaffold na na DLUJ01000081.1 = NZ_DLUJ01000081.1 Primary Assembly 24854 na CLE-Rm_scaffold82 unplaced-scaffold na na DLUJ01000082.1 = NZ_DLUJ01000082.1 Primary Assembly 13475 na CLE-Rm_scaffold83 unplaced-scaffold na na DLUJ01000083.1 = NZ_DLUJ01000083.1 Primary Assembly 10086 na CLE-Rm_scaffold84 unplaced-scaffold na na DLUJ01000084.1 = NZ_DLUJ01000084.1 Primary Assembly 3014 na CLE-Rm_scaffold85 unplaced-scaffold na na DLUJ01000085.1 = NZ_DLUJ01000085.1 Primary Assembly 1831 na CLE-Rm_scaffold86 unplaced-scaffold na na DLUJ01000086.1 = NZ_DLUJ01000086.1 Primary Assembly 19911 na CLE-Rm_scaffold87 unplaced-scaffold na na DLUJ01000087.1 = NZ_DLUJ01000087.1 Primary Assembly 14057 na CLE-Rm_scaffold88 unplaced-scaffold na na DLUJ01000088.1 = NZ_DLUJ01000088.1 Primary Assembly 127412 na CLE-Rm_scaffold89 unplaced-scaffold na na DLUJ01000089.1 = NZ_DLUJ01000089.1 Primary Assembly 13070 na