# Assembly name: ASM300778v1 # Organism name: Aphanothece hegewaldii CCALA 016 (cyanobacteria) # Infraspecific name: strain=CCALA 016 # Taxid: 2107694 # BioSample: SAMN08617396 # BioProject: PRJNA436169 # Submitter: Massachusetts Institute of Technology # Date: 2018-03-18 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: PXOH01 # Assembly method: SPAdes v. 3.11.1 # Expected final version: yes # Genome coverage: 68.223x # Sequencing technology: Illumina MiSeq # RefSeq category: Reference Genome # GenBank assembly accession: GCA_003007785.1 # RefSeq assembly accession: GCF_003007785.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_003007805.1 GCF_003007805.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name NODE_6_length_418851_cov_68.223_ID_74827 unplaced-scaffold na na PXOH01000001.1 = NZ_PXOH01000001.1 Primary Assembly 418851 na NODE_12_length_303020_cov_68.5486_ID_74839 unplaced-scaffold na na PXOH01000002.1 = NZ_PXOH01000002.1 Primary Assembly 303020 na NODE_13_length_291007_cov_68.7778_ID_74841 unplaced-scaffold na na PXOH01000003.1 = NZ_PXOH01000003.1 Primary Assembly 291007 na NODE_14_length_282582_cov_68.8377_ID_74843 unplaced-scaffold na na PXOH01000004.1 = NZ_PXOH01000004.1 Primary Assembly 282582 na NODE_16_length_272853_cov_67.8525_ID_74847 unplaced-scaffold na na PXOH01000005.1 = NZ_PXOH01000005.1 Primary Assembly 272853 na NODE_17_length_265644_cov_71.0079_ID_74849 unplaced-scaffold na na PXOH01000006.1 = NZ_PXOH01000006.1 Primary Assembly 265644 na NODE_21_length_212785_cov_72.5718_ID_74857 unplaced-scaffold na na PXOH01000007.1 = NZ_PXOH01000007.1 Primary Assembly 212785 na NODE_26_length_177006_cov_68.6362_ID_74867 unplaced-scaffold na na PXOH01000008.1 = NZ_PXOH01000008.1 Primary Assembly 177006 na NODE_32_length_156333_cov_68.9827_ID_74879 unplaced-scaffold na na PXOH01000009.1 = NZ_PXOH01000009.1 Primary Assembly 156333 na NODE_34_length_147170_cov_69.125_ID_74883 unplaced-scaffold na na PXOH01000010.1 = NZ_PXOH01000010.1 Primary Assembly 147170 na NODE_35_length_144177_cov_70.0203_ID_74891 unplaced-scaffold na na PXOH01000011.1 = NZ_PXOH01000011.1 Primary Assembly 144177 na NODE_38_length_126362_cov_67.8258_ID_74897 unplaced-scaffold na na PXOH01000012.1 = NZ_PXOH01000012.1 Primary Assembly 126362 na NODE_39_length_122459_cov_68.3323_ID_74899 unplaced-scaffold na na PXOH01000013.1 = NZ_PXOH01000013.1 Primary Assembly 122459 na NODE_40_length_119962_cov_67.6576_ID_74913 unplaced-scaffold na na PXOH01000014.1 = NZ_PXOH01000014.1 Primary Assembly 119962 na NODE_42_length_117626_cov_69.6244_ID_74917 unplaced-scaffold na na PXOH01000015.1 = NZ_PXOH01000015.1 Primary Assembly 117626 na NODE_43_length_115765_cov_68.1432_ID_74919 unplaced-scaffold na na PXOH01000016.1 = NZ_PXOH01000016.1 Primary Assembly 115765 na NODE_46_length_109954_cov_79.865_ID_74923 unplaced-scaffold na na PXOH01000017.1 = NZ_PXOH01000017.1 Primary Assembly 109954 na NODE_47_length_108150_cov_69.0826_ID_74925 unplaced-scaffold na na PXOH01000018.1 = NZ_PXOH01000018.1 Primary Assembly 108150 na NODE_48_length_104867_cov_70.2256_ID_74927 unplaced-scaffold na na PXOH01000019.1 = NZ_PXOH01000019.1 Primary Assembly 104867 na NODE_56_length_84091_cov_70.0178_ID_74955 unplaced-scaffold na na PXOH01000020.1 = NZ_PXOH01000020.1 Primary Assembly 84091 na NODE_58_length_83444_cov_68.5611_ID_74959 unplaced-scaffold na na PXOH01000021.1 = NZ_PXOH01000021.1 Primary Assembly 83444 na NODE_60_length_82370_cov_68.5343_ID_74963 unplaced-scaffold na na PXOH01000022.1 = NZ_PXOH01000022.1 Primary Assembly 82370 na NODE_64_length_78254_cov_69.0292_ID_74989 unplaced-scaffold na na PXOH01000023.1 = NZ_PXOH01000023.1 Primary Assembly 78254 na NODE_71_length_71986_cov_82.6379_ID_75009 unplaced-scaffold na na PXOH01000024.1 = NZ_PXOH01000024.1 Primary Assembly 71986 na NODE_80_length_64214_cov_70.326_ID_75031 unplaced-scaffold na na PXOH01000025.1 = NZ_PXOH01000025.1 Primary Assembly 64214 na NODE_85_length_60383_cov_67.7049_ID_75041 unplaced-scaffold na na PXOH01000026.1 = NZ_PXOH01000026.1 Primary Assembly 60383 na NODE_92_length_57133_cov_66.8076_ID_75049 unplaced-scaffold na na PXOH01000027.1 = NZ_PXOH01000027.1 Primary Assembly 57133 na NODE_93_length_57125_cov_166.725_ID_75051 unplaced-scaffold na na PXOH01000028.1 = NZ_PXOH01000028.1 Primary Assembly 57125 na NODE_98_length_54879_cov_70.4276_ID_75079 unplaced-scaffold na na PXOH01000029.1 = NZ_PXOH01000029.1 Primary Assembly 54879 na NODE_100_length_53904_cov_62.2298_ID_75099 unplaced-scaffold na na PXOH01000030.1 = NZ_PXOH01000030.1 Primary Assembly 53904 na NODE_107_length_49982_cov_75.5771_ID_75115 unplaced-scaffold na na PXOH01000031.1 = NZ_PXOH01000031.1 Primary Assembly 49982 na NODE_116_length_45960_cov_67.9343_ID_75153 unplaced-scaffold na na PXOH01000032.1 = NZ_PXOH01000032.1 Primary Assembly 45960 na NODE_118_length_45842_cov_70.3881_ID_75157 unplaced-scaffold na na PXOH01000033.1 = NZ_PXOH01000033.1 Primary Assembly 45842 na NODE_120_length_45616_cov_68.9682_ID_75161 unplaced-scaffold na na PXOH01000034.1 = NZ_PXOH01000034.1 Primary Assembly 45616 na NODE_122_length_44743_cov_68.2857_ID_75169 unplaced-scaffold na na PXOH01000035.1 = NZ_PXOH01000035.1 Primary Assembly 44743 na NODE_123_length_44139_cov_67.9477_ID_75171 unplaced-scaffold na na PXOH01000036.1 = NZ_PXOH01000036.1 Primary Assembly 44139 na NODE_125_length_43960_cov_75.6605_ID_75175 unplaced-scaffold na na PXOH01000037.1 = NZ_PXOH01000037.1 Primary Assembly 43960 na NODE_136_length_40332_cov_67.4873_ID_75199 unplaced-scaffold na na PXOH01000038.1 = NZ_PXOH01000038.1 Primary Assembly 40332 na NODE_141_length_37761_cov_67.9237_ID_75217 unplaced-scaffold na na PXOH01000039.1 = NZ_PXOH01000039.1 Primary Assembly 37761 na NODE_146_length_36745_cov_69.6743_ID_75233 unplaced-scaffold na na PXOH01000040.1 = NZ_PXOH01000040.1 Primary Assembly 36745 na NODE_147_length_36698_cov_59.0592_ID_75235 unplaced-scaffold na na PXOH01000041.1 = NZ_PXOH01000041.1 Primary Assembly 36698 na NODE_152_length_34906_cov_52.2964_ID_75245 unplaced-scaffold na na PXOH01000042.1 = NZ_PXOH01000042.1 Primary Assembly 34906 na NODE_155_length_34735_cov_77.8524_ID_75249 unplaced-scaffold na na PXOH01000043.1 = NZ_PXOH01000043.1 Primary Assembly 34735 na NODE_161_length_32844_cov_68.5382_ID_75261 unplaced-scaffold na na PXOH01000044.1 = NZ_PXOH01000044.1 Primary Assembly 32844 na NODE_164_length_31829_cov_67.4016_ID_75267 unplaced-scaffold na na PXOH01000045.1 = NZ_PXOH01000045.1 Primary Assembly 31829 na NODE_175_length_28087_cov_69.8272_ID_75285 unplaced-scaffold na na PXOH01000046.1 = NZ_PXOH01000046.1 Primary Assembly 28087 na NODE_185_length_25564_cov_69.5992_ID_75311 unplaced-scaffold na na PXOH01000047.1 = NZ_PXOH01000047.1 Primary Assembly 25564 na NODE_190_length_24790_cov_67.0238_ID_75331 unplaced-scaffold na na PXOH01000048.1 = NZ_PXOH01000048.1 Primary Assembly 24790 na NODE_192_length_24145_cov_79.4649_ID_75339 unplaced-scaffold na na PXOH01000049.1 = NZ_PXOH01000049.1 Primary Assembly 24145 na NODE_217_length_21612_cov_66.5205_ID_75377 unplaced-scaffold na na PXOH01000050.1 = NZ_PXOH01000050.1 Primary Assembly 21612 na NODE_233_length_19077_cov_79.6142_ID_75401 unplaced-scaffold na na PXOH01000051.1 = NZ_PXOH01000051.1 Primary Assembly 19077 na NODE_237_length_18424_cov_81.613_ID_75413 unplaced-scaffold na na PXOH01000052.1 = NZ_PXOH01000052.1 Primary Assembly 18424 na NODE_263_length_14993_cov_74.5522_ID_75459 unplaced-scaffold na na PXOH01000053.1 = NZ_PXOH01000053.1 Primary Assembly 14993 na NODE_268_length_14469_cov_50.8319_ID_75469 unplaced-scaffold na na PXOH01000054.1 = NZ_PXOH01000054.1 Primary Assembly 14469 na NODE_286_length_13325_cov_58.72_ID_75493 unplaced-scaffold na na PXOH01000055.1 = NZ_PXOH01000055.1 Primary Assembly 13325 na NODE_294_length_12630_cov_131.512_ID_75511 unplaced-scaffold na na PXOH01000056.1 = NZ_PXOH01000056.1 Primary Assembly 12630 na NODE_305_length_12106_cov_40.6017_ID_75537 unplaced-scaffold na na PXOH01000057.1 = NZ_PXOH01000057.1 Primary Assembly 12106 na NODE_309_length_11798_cov_52.4166_ID_75543 unplaced-scaffold na na PXOH01000058.1 = NZ_PXOH01000058.1 Primary Assembly 11798 na NODE_320_length_11035_cov_51.1332_ID_75571 unplaced-scaffold na na PXOH01000059.1 = NZ_PXOH01000059.1 Primary Assembly 11035 na NODE_321_length_11034_cov_71.0797_ID_75573 unplaced-scaffold na na PXOH01000060.1 = NZ_PXOH01000060.1 Primary Assembly 11034 na NODE_338_length_10490_cov_67.7429_ID_75607 unplaced-scaffold na na PXOH01000061.1 = NZ_PXOH01000061.1 Primary Assembly 10490 na NODE_342_length_10266_cov_68.886_ID_75613 unplaced-scaffold na na PXOH01000062.1 = NZ_PXOH01000062.1 Primary Assembly 10266 na NODE_344_length_10239_cov_66.9043_ID_75615 unplaced-scaffold na na PXOH01000063.1 = NZ_PXOH01000063.1 Primary Assembly 10239 na NODE_345_length_10212_cov_113.676_ID_75617 unplaced-scaffold na na PXOH01000064.1 = NZ_PXOH01000064.1 Primary Assembly 10212 na NODE_351_length_9994_cov_69.0645_ID_75627 unplaced-scaffold na na PXOH01000065.1 = NZ_PXOH01000065.1 Primary Assembly 9994 na NODE_370_length_8928_cov_288.942_ID_75671 unplaced-scaffold na na PXOH01000066.1 = NZ_PXOH01000066.1 Primary Assembly 8928 na NODE_372_length_8810_cov_158.61_ID_75675 unplaced-scaffold na na PXOH01000067.1 = NZ_PXOH01000067.1 Primary Assembly 8810 na NODE_377_length_8432_cov_70.6383_ID_75685 unplaced-scaffold na na PXOH01000068.1 = NZ_PXOH01000068.1 Primary Assembly 8432 na NODE_380_length_8317_cov_77.1767_ID_75687 unplaced-scaffold na na PXOH01000069.1 = NZ_PXOH01000069.1 Primary Assembly 8317 na NODE_397_length_7684_cov_78.95_ID_75717 unplaced-scaffold na na PXOH01000070.1 = NZ_PXOH01000070.1 Primary Assembly 7684 na NODE_400_length_7369_cov_51.0805_ID_75719 unplaced-scaffold na na PXOH01000071.1 = NZ_PXOH01000071.1 Primary Assembly 7369 na NODE_402_length_7251_cov_82.3439_ID_75723 unplaced-scaffold na na PXOH01000072.1 = NZ_PXOH01000072.1 Primary Assembly 7251 na NODE_404_length_7207_cov_53.7334_ID_75727 unplaced-scaffold na na PXOH01000073.1 = NZ_PXOH01000073.1 Primary Assembly 7207 na NODE_407_length_7061_cov_56.9718_ID_75733 unplaced-scaffold na na PXOH01000074.1 = NZ_PXOH01000074.1 Primary Assembly 7061 na NODE_423_length_6531_cov_69.7037_ID_75755 unplaced-scaffold na na PXOH01000075.1 = NZ_PXOH01000075.1 Primary Assembly 6531 na NODE_457_length_5340_cov_69.1036_ID_75805 unplaced-scaffold na na PXOH01000076.1 = NZ_PXOH01000076.1 Primary Assembly 5340 na NODE_461_length_5256_cov_50.6233_ID_75811 unplaced-scaffold na na PXOH01000077.1 = NZ_PXOH01000077.1 Primary Assembly 5256 na NODE_470_length_4804_cov_53.2001_ID_75821 unplaced-scaffold na na PXOH01000078.1 = NZ_PXOH01000078.1 Primary Assembly 4804 na NODE_474_length_4636_cov_71.492_ID_75831 unplaced-scaffold na na PXOH01000079.1 = NZ_PXOH01000079.1 Primary Assembly 4636 na NODE_489_length_4360_cov_50.4114_ID_75853 unplaced-scaffold na na PXOH01000080.1 = NZ_PXOH01000080.1 Primary Assembly 4360 na NODE_491_length_4349_cov_284.359_ID_75855 unplaced-scaffold na na PXOH01000081.1 = NZ_PXOH01000081.1 Primary Assembly 4349 na NODE_494_length_4278_cov_52.407_ID_75861 unplaced-scaffold na na PXOH01000082.1 = NZ_PXOH01000082.1 Primary Assembly 4278 na NODE_519_length_3473_cov_87.3216_ID_75909 unplaced-scaffold na na PXOH01000083.1 = NZ_PXOH01000083.1 Primary Assembly 3473 na NODE_528_length_3252_cov_110.45_ID_75931 unplaced-scaffold na na PXOH01000084.1 = NZ_PXOH01000084.1 Primary Assembly 3252 na NODE_529_length_3236_cov_112.658_ID_75933 unplaced-scaffold na na PXOH01000085.1 = NZ_PXOH01000085.1 Primary Assembly 3236 na NODE_531_length_3157_cov_69.576_ID_75937 unplaced-scaffold na na PXOH01000086.1 = NZ_PXOH01000086.1 Primary Assembly 3157 na NODE_543_length_2675_cov_203.094_ID_75955 unplaced-scaffold na na PXOH01000087.1 = NZ_PXOH01000087.1 Primary Assembly 2675 na NODE_561_length_2299_cov_1469.78_ID_75987 unplaced-scaffold na na PXOH01000088.1 = NZ_PXOH01000088.1 Primary Assembly 2299 na NODE_562_length_2294_cov_222.658_ID_75989 unplaced-scaffold na na PXOH01000089.1 = NZ_PXOH01000089.1 Primary Assembly 2294 na NODE_564_length_2226_cov_206.884_ID_75993 unplaced-scaffold na na PXOH01000090.1 = NZ_PXOH01000090.1 Primary Assembly 2226 na NODE_565_length_2220_cov_204.933_ID_75995 unplaced-scaffold na na PXOH01000091.1 = NZ_PXOH01000091.1 Primary Assembly 2220 na NODE_566_length_2212_cov_89.3981_ID_75997 unplaced-scaffold na na PXOH01000092.1 = NZ_PXOH01000092.1 Primary Assembly 2212 na NODE_567_length_2194_cov_0.274445_ID_75999 unplaced-scaffold na na PXOH01000093.1 = NZ_PXOH01000093.1 Primary Assembly 2118 na NODE_568_length_2192_cov_113.777_ID_76001 unplaced-scaffold na na PXOH01000094.1 = NZ_PXOH01000094.1 Primary Assembly 2192 na NODE_577_length_1846_cov_76.0741_ID_76015 unplaced-scaffold na na PXOH01000095.1 = NZ_PXOH01000095.1 Primary Assembly 1846 na NODE_579_length_1840_cov_134.539_ID_76017 unplaced-scaffold na na PXOH01000096.1 = NZ_PXOH01000096.1 Primary Assembly 1840 na NODE_580_length_1835_cov_129.093_ID_76019 unplaced-scaffold na na PXOH01000097.1 = NZ_PXOH01000097.1 Primary Assembly 1835 na NODE_582_length_1812_cov_0.609222_ID_76021 unplaced-scaffold na na PXOH01000098.1 = NZ_PXOH01000098.1 Primary Assembly 1758 na NODE_585_length_1778_cov_138.375_ID_76025 unplaced-scaffold na na PXOH01000099.1 = NZ_PXOH01000099.1 Primary Assembly 1778 na NODE_589_length_1716_cov_53.6876_ID_76031 unplaced-scaffold na na PXOH01000100.1 = NZ_PXOH01000100.1 Primary Assembly 1716 na NODE_597_length_1601_cov_80.666_ID_76049 unplaced-scaffold na na PXOH01000101.1 = NZ_PXOH01000101.1 Primary Assembly 1601 na NODE_601_length_1556_cov_605.185_ID_76057 unplaced-scaffold na na PXOH01000102.1 = NZ_PXOH01000102.1 Primary Assembly 1556 na NODE_603_length_1544_cov_109.431_ID_76061 unplaced-scaffold na na PXOH01000103.1 = NZ_PXOH01000103.1 Primary Assembly 1544 na NODE_605_length_1502_cov_53.4961_ID_76063 unplaced-scaffold na na PXOH01000104.1 = NZ_PXOH01000104.1 Primary Assembly 1502 na NODE_609_length_1450_cov_435.724_ID_76071 unplaced-scaffold na na PXOH01000105.1 = NZ_PXOH01000105.1 Primary Assembly 1450 na NODE_611_length_1427_cov_66.6252_ID_76075 unplaced-scaffold na na PXOH01000106.1 = NZ_PXOH01000106.1 Primary Assembly 1427 na NODE_613_length_1393_cov_103.834_ID_76079 unplaced-scaffold na na PXOH01000107.1 = NZ_PXOH01000107.1 Primary Assembly 1393 na NODE_618_length_1346_cov_92.7187_ID_76089 unplaced-scaffold na na PXOH01000108.1 = NZ_PXOH01000108.1 Primary Assembly 1346 na NODE_620_length_1312_cov_1.2983_ID_76093 unplaced-scaffold na na PXOH01000109.1 = NZ_PXOH01000109.1 Primary Assembly 1055 na NODE_625_length_1241_cov_74.1443_ID_76103 unplaced-scaffold na na PXOH01000110.1 = NZ_PXOH01000110.1 Primary Assembly 1241 na NODE_629_length_1220_cov_135.372_ID_76111 unplaced-scaffold na na PXOH01000111.1 = NZ_PXOH01000111.1 Primary Assembly 1220 na NODE_636_length_1160_cov_1512.29_ID_76123 unplaced-scaffold na na PXOH01000112.1 = NZ_PXOH01000112.1 Primary Assembly 1160 na NODE_637_length_1151_cov_78.7402_ID_76125 unplaced-scaffold na na PXOH01000113.1 = NZ_PXOH01000113.1 Primary Assembly 1151 na NODE_639_length_1134_cov_890.697_ID_76129 unplaced-scaffold na na PXOH01000114.1 = NZ_PXOH01000114.1 Primary Assembly 1134 na NODE_640_length_1128_cov_84.3264_ID_76131 unplaced-scaffold na na PXOH01000115.1 = NZ_PXOH01000115.1 Primary Assembly 1128 na NODE_641_length_1120_cov_123.44_ID_76133 unplaced-scaffold na na PXOH01000116.1 = NZ_PXOH01000116.1 Primary Assembly 1120 na NODE_643_length_1078_cov_365.093_ID_76137 unplaced-scaffold na na PXOH01000117.1 = NZ_PXOH01000117.1 Primary Assembly 1078 na NODE_644_length_1062_cov_108.291_ID_76139 unplaced-scaffold na na PXOH01000118.1 = NZ_PXOH01000118.1 Primary Assembly 1062 na NODE_649_length_1017_cov_72.5043_ID_76149 unplaced-scaffold na na PXOH01000119.1 = NZ_PXOH01000119.1 Primary Assembly 1017 na NODE_652_length_1008_cov_140.787_ID_76155 unplaced-scaffold na na PXOH01000120.1 = NZ_PXOH01000120.1 Primary Assembly 1008 na