# Assembly name: ASM301447v1 # Organism name: Shimia abyssi (a-proteobacteria) # Infraspecific name: strain=DSM 100673 # Taxid: 1662395 # BioSample: SAMN07621369 # BioProject: PRJNA402510 # Submitter: DOE Joint Genome Institute # Date: 2018-03-23 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: PYGJ01 # Assembly method: SPAdes v. 3.9.0 # Expected final version: no # Genome coverage: 205.0x # Sequencing technology: Illumina HiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_003014475.1 # RefSeq assembly accession: GCF_003014475.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_003014505.1 GCF_003014505.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Ga0181044_101 unplaced-scaffold na na PYGJ01000001.1 = NZ_PYGJ01000001.1 Primary Assembly 805724 na Ga0181044_102 unplaced-scaffold na na PYGJ01000002.1 = NZ_PYGJ01000002.1 Primary Assembly 517428 na Ga0181044_103 unplaced-scaffold na na PYGJ01000003.1 = NZ_PYGJ01000003.1 Primary Assembly 392277 na Ga0181044_104 unplaced-scaffold na na PYGJ01000004.1 = NZ_PYGJ01000004.1 Primary Assembly 289047 na Ga0181044_105 unplaced-scaffold na na PYGJ01000005.1 = NZ_PYGJ01000005.1 Primary Assembly 250288 na Ga0181044_106 unplaced-scaffold na na PYGJ01000006.1 = NZ_PYGJ01000006.1 Primary Assembly 190888 na Ga0181044_107 unplaced-scaffold na na PYGJ01000007.1 = NZ_PYGJ01000007.1 Primary Assembly 188909 na Ga0181044_108 unplaced-scaffold na na PYGJ01000008.1 = NZ_PYGJ01000008.1 Primary Assembly 184156 na Ga0181044_109 unplaced-scaffold na na PYGJ01000009.1 = NZ_PYGJ01000009.1 Primary Assembly 169170 na Ga0181044_110 unplaced-scaffold na na PYGJ01000010.1 = NZ_PYGJ01000010.1 Primary Assembly 148569 na Ga0181044_111 unplaced-scaffold na na PYGJ01000011.1 = NZ_PYGJ01000011.1 Primary Assembly 136839 na Ga0181044_112 unplaced-scaffold na na PYGJ01000012.1 = NZ_PYGJ01000012.1 Primary Assembly 136225 na Ga0181044_113 unplaced-scaffold na na PYGJ01000013.1 = NZ_PYGJ01000013.1 Primary Assembly 125374 na Ga0181044_114 unplaced-scaffold na na PYGJ01000014.1 = NZ_PYGJ01000014.1 Primary Assembly 109395 na Ga0181044_115 unplaced-scaffold na na PYGJ01000015.1 = NZ_PYGJ01000015.1 Primary Assembly 108936 na Ga0181044_116 unplaced-scaffold na na PYGJ01000016.1 = NZ_PYGJ01000016.1 Primary Assembly 108568 na Ga0181044_117 unplaced-scaffold na na PYGJ01000017.1 = NZ_PYGJ01000017.1 Primary Assembly 107792 na Ga0181044_118 unplaced-scaffold na na PYGJ01000018.1 = NZ_PYGJ01000018.1 Primary Assembly 106715 na Ga0181044_119 unplaced-scaffold na na PYGJ01000019.1 = NZ_PYGJ01000019.1 Primary Assembly 94444 na Ga0181044_120 unplaced-scaffold na na PYGJ01000020.1 = NZ_PYGJ01000020.1 Primary Assembly 79313 na Ga0181044_121 unplaced-scaffold na na PYGJ01000021.1 = NZ_PYGJ01000021.1 Primary Assembly 64582 na Ga0181044_122 unplaced-scaffold na na PYGJ01000022.1 = NZ_PYGJ01000022.1 Primary Assembly 61937 na Ga0181044_123 unplaced-scaffold na na PYGJ01000023.1 = NZ_PYGJ01000023.1 Primary Assembly 55484 na Ga0181044_124 unplaced-scaffold na na PYGJ01000024.1 = NZ_PYGJ01000024.1 Primary Assembly 45950 na Ga0181044_125 unplaced-scaffold na na PYGJ01000025.1 = NZ_PYGJ01000025.1 Primary Assembly 36546 na Ga0181044_126 unplaced-scaffold na na PYGJ01000026.1 = NZ_PYGJ01000026.1 Primary Assembly 27467 na Ga0181044_127 unplaced-scaffold na na PYGJ01000027.1 = NZ_PYGJ01000027.1 Primary Assembly 26244 na Ga0181044_128 unplaced-scaffold na na PYGJ01000028.1 = NZ_PYGJ01000028.1 Primary Assembly 25446 na Ga0181044_129 unplaced-scaffold na na PYGJ01000029.1 = NZ_PYGJ01000029.1 Primary Assembly 20977 na Ga0181044_130 unplaced-scaffold na na PYGJ01000030.1 = NZ_PYGJ01000030.1 Primary Assembly 19195 na Ga0181044_131 unplaced-scaffold na na PYGJ01000031.1 = NZ_PYGJ01000031.1 Primary Assembly 17888 na Ga0181044_132 unplaced-scaffold na na PYGJ01000032.1 = NZ_PYGJ01000032.1 Primary Assembly 15016 na Ga0181044_133 unplaced-scaffold na na PYGJ01000033.1 = NZ_PYGJ01000033.1 Primary Assembly 14819 na Ga0181044_134 unplaced-scaffold na na PYGJ01000034.1 = NZ_PYGJ01000034.1 Primary Assembly 9250 na Ga0181044_135 unplaced-scaffold na na PYGJ01000035.1 = NZ_PYGJ01000035.1 Primary Assembly 6299 na Ga0181044_136 unplaced-scaffold na na PYGJ01000036.1 = NZ_PYGJ01000036.1 Primary Assembly 6147 na Ga0181044_137 unplaced-scaffold na na PYGJ01000037.1 = NZ_PYGJ01000037.1 Primary Assembly 5369 na Ga0181044_138 unplaced-scaffold na na PYGJ01000038.1 = NZ_PYGJ01000038.1 Primary Assembly 4803 na Ga0181044_139 unplaced-scaffold na na PYGJ01000039.1 = NZ_PYGJ01000039.1 Primary Assembly 4696 na Ga0181044_140 unplaced-scaffold na na PYGJ01000040.1 = NZ_PYGJ01000040.1 Primary Assembly 2748 na Ga0181044_141 unplaced-scaffold na na PYGJ01000041.1 = NZ_PYGJ01000041.1 Primary Assembly 1836 na Ga0181044_142 unplaced-scaffold na na PYGJ01000042.1 = NZ_PYGJ01000042.1 Primary Assembly 1692 na Ga0181044_143 unplaced-scaffold na na PYGJ01000043.1 = NZ_PYGJ01000043.1 Primary Assembly 1685 na Ga0181044_144 unplaced-scaffold na na PYGJ01000044.1 = NZ_PYGJ01000044.1 Primary Assembly 1440 na Ga0181044_145 unplaced-scaffold na na PYGJ01000045.1 = NZ_PYGJ01000045.1 Primary Assembly 1317 na Ga0181044_146 unplaced-scaffold na na PYGJ01000046.1 = NZ_PYGJ01000046.1 Primary Assembly 1256 na Ga0181044_147 unplaced-scaffold na na PYGJ01000047.1 = NZ_PYGJ01000047.1 Primary Assembly 1228 na Ga0181044_148 unplaced-scaffold na na PYGJ01000048.1 = NZ_PYGJ01000048.1 Primary Assembly 1227 na