# Assembly name: ASM305417v1 # Organism name: Allosediminivita pacifica (a-proteobacteria) # Infraspecific name: strain=DSM 29329 # Taxid: 1267769 # BioSample: SAMN08777458 # BioProject: PRJNA443695 # Submitter: DOE Joint Genome Institute # Date: 2018-04-17 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: QBKN01 # Assembly method: SPAdes v. 3.10.1 # Expected final version: no # Genome coverage: 170.0x # Sequencing technology: Illumina HiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_003054175.1 # RefSeq assembly accession: GCF_003054175.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_003054205.1 GCF_003054205.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Ga0196855_101 unplaced-scaffold na na QBKN01000001.1 = NZ_QBKN01000001.1 Primary Assembly 346036 na Ga0196855_102 unplaced-scaffold na na QBKN01000002.1 = NZ_QBKN01000002.1 Primary Assembly 282188 na Ga0196855_103 unplaced-scaffold na na QBKN01000003.1 = NZ_QBKN01000003.1 Primary Assembly 229597 na Ga0196855_104 unplaced-scaffold na na QBKN01000004.1 = NZ_QBKN01000004.1 Primary Assembly 217395 na Ga0196855_105 unplaced-scaffold na na QBKN01000005.1 = NZ_QBKN01000005.1 Primary Assembly 198919 na Ga0196855_106 unplaced-scaffold na na QBKN01000006.1 = NZ_QBKN01000006.1 Primary Assembly 188462 na Ga0196855_107 unplaced-scaffold na na QBKN01000007.1 = NZ_QBKN01000007.1 Primary Assembly 186749 na Ga0196855_108 unplaced-scaffold na na QBKN01000008.1 = NZ_QBKN01000008.1 Primary Assembly 158054 na Ga0196855_109 unplaced-scaffold na na QBKN01000009.1 = NZ_QBKN01000009.1 Primary Assembly 146206 na Ga0196855_110 unplaced-scaffold na na QBKN01000010.1 = NZ_QBKN01000010.1 Primary Assembly 146040 na Ga0196855_111 unplaced-scaffold na na QBKN01000011.1 = NZ_QBKN01000011.1 Primary Assembly 145424 na Ga0196855_112 unplaced-scaffold na na QBKN01000012.1 = NZ_QBKN01000012.1 Primary Assembly 143189 na Ga0196855_113 unplaced-scaffold na na QBKN01000013.1 = NZ_QBKN01000013.1 Primary Assembly 131377 na Ga0196855_114 unplaced-scaffold na na QBKN01000014.1 = NZ_QBKN01000014.1 Primary Assembly 124624 na Ga0196855_115 unplaced-scaffold na na QBKN01000015.1 = NZ_QBKN01000015.1 Primary Assembly 120208 na Ga0196855_116 unplaced-scaffold na na QBKN01000016.1 = NZ_QBKN01000016.1 Primary Assembly 116214 na Ga0196855_117 unplaced-scaffold na na QBKN01000017.1 = NZ_QBKN01000017.1 Primary Assembly 109554 na Ga0196855_118 unplaced-scaffold na na QBKN01000018.1 = NZ_QBKN01000018.1 Primary Assembly 104082 na Ga0196855_119 unplaced-scaffold na na QBKN01000019.1 = NZ_QBKN01000019.1 Primary Assembly 101819 na Ga0196855_120 unplaced-scaffold na na QBKN01000020.1 = NZ_QBKN01000020.1 Primary Assembly 98059 na Ga0196855_121 unplaced-scaffold na na QBKN01000021.1 = NZ_QBKN01000021.1 Primary Assembly 92274 na Ga0196855_122 unplaced-scaffold na na QBKN01000022.1 = NZ_QBKN01000022.1 Primary Assembly 90425 na Ga0196855_123 unplaced-scaffold na na QBKN01000023.1 = NZ_QBKN01000023.1 Primary Assembly 88037 na Ga0196855_124 unplaced-scaffold na na QBKN01000024.1 = NZ_QBKN01000024.1 Primary Assembly 83180 na Ga0196855_125 unplaced-scaffold na na QBKN01000025.1 = NZ_QBKN01000025.1 Primary Assembly 82889 na Ga0196855_126 unplaced-scaffold na na QBKN01000026.1 = NZ_QBKN01000026.1 Primary Assembly 71793 na Ga0196855_127 unplaced-scaffold na na QBKN01000027.1 = NZ_QBKN01000027.1 Primary Assembly 67443 na Ga0196855_128 unplaced-scaffold na na QBKN01000028.1 = NZ_QBKN01000028.1 Primary Assembly 61989 na Ga0196855_129 unplaced-scaffold na na QBKN01000029.1 = NZ_QBKN01000029.1 Primary Assembly 60355 na Ga0196855_130 unplaced-scaffold na na QBKN01000030.1 = NZ_QBKN01000030.1 Primary Assembly 54575 na Ga0196855_131 unplaced-scaffold na na QBKN01000031.1 = NZ_QBKN01000031.1 Primary Assembly 51239 na Ga0196855_132 unplaced-scaffold na na QBKN01000032.1 = NZ_QBKN01000032.1 Primary Assembly 47840 na Ga0196855_133 unplaced-scaffold na na QBKN01000033.1 = NZ_QBKN01000033.1 Primary Assembly 46123 na Ga0196855_134 unplaced-scaffold na na QBKN01000034.1 = NZ_QBKN01000034.1 Primary Assembly 45946 na Ga0196855_135 unplaced-scaffold na na QBKN01000035.1 = NZ_QBKN01000035.1 Primary Assembly 45246 na Ga0196855_136 unplaced-scaffold na na QBKN01000036.1 = NZ_QBKN01000036.1 Primary Assembly 43412 na Ga0196855_137 unplaced-scaffold na na QBKN01000037.1 = NZ_QBKN01000037.1 Primary Assembly 33171 na Ga0196855_138 unplaced-scaffold na na QBKN01000038.1 = NZ_QBKN01000038.1 Primary Assembly 32540 na Ga0196855_139 unplaced-scaffold na na QBKN01000039.1 = NZ_QBKN01000039.1 Primary Assembly 28644 na Ga0196855_140 unplaced-scaffold na na QBKN01000040.1 = NZ_QBKN01000040.1 Primary Assembly 25691 na Ga0196855_141 unplaced-scaffold na na QBKN01000041.1 = NZ_QBKN01000041.1 Primary Assembly 21891 na Ga0196855_142 unplaced-scaffold na na QBKN01000042.1 = NZ_QBKN01000042.1 Primary Assembly 21753 na Ga0196855_143 unplaced-scaffold na na QBKN01000043.1 = NZ_QBKN01000043.1 Primary Assembly 18735 na Ga0196855_144 unplaced-scaffold na na QBKN01000044.1 = NZ_QBKN01000044.1 Primary Assembly 17721 na Ga0196855_145 unplaced-scaffold na na QBKN01000045.1 = NZ_QBKN01000045.1 Primary Assembly 17287 na Ga0196855_146 unplaced-scaffold na na QBKN01000046.1 = NZ_QBKN01000046.1 Primary Assembly 16636 na Ga0196855_147 unplaced-scaffold na na QBKN01000047.1 = NZ_QBKN01000047.1 Primary Assembly 16463 na Ga0196855_148 unplaced-scaffold na na QBKN01000048.1 = NZ_QBKN01000048.1 Primary Assembly 16333 na Ga0196855_149 unplaced-scaffold na na QBKN01000049.1 = NZ_QBKN01000049.1 Primary Assembly 15632 na Ga0196855_150 unplaced-scaffold na na QBKN01000050.1 = NZ_QBKN01000050.1 Primary Assembly 15207 na Ga0196855_151 unplaced-scaffold na na QBKN01000051.1 = NZ_QBKN01000051.1 Primary Assembly 13201 na Ga0196855_152 unplaced-scaffold na na QBKN01000052.1 = NZ_QBKN01000052.1 Primary Assembly 12863 na Ga0196855_153 unplaced-scaffold na na QBKN01000053.1 = NZ_QBKN01000053.1 Primary Assembly 12695 na Ga0196855_154 unplaced-scaffold na na QBKN01000054.1 = NZ_QBKN01000054.1 Primary Assembly 11742 na Ga0196855_155 unplaced-scaffold na na QBKN01000055.1 = NZ_QBKN01000055.1 Primary Assembly 11585 na Ga0196855_156 unplaced-scaffold na na QBKN01000056.1 = NZ_QBKN01000056.1 Primary Assembly 11045 na Ga0196855_157 unplaced-scaffold na na QBKN01000057.1 = NZ_QBKN01000057.1 Primary Assembly 9780 na Ga0196855_158 unplaced-scaffold na na QBKN01000058.1 = NZ_QBKN01000058.1 Primary Assembly 9531 na Ga0196855_159 unplaced-scaffold na na QBKN01000059.1 = NZ_QBKN01000059.1 Primary Assembly 8816 na Ga0196855_160 unplaced-scaffold na na QBKN01000060.1 = NZ_QBKN01000060.1 Primary Assembly 8760 na Ga0196855_161 unplaced-scaffold na na QBKN01000061.1 = NZ_QBKN01000061.1 Primary Assembly 7856 na Ga0196855_162 unplaced-scaffold na na QBKN01000062.1 = NZ_QBKN01000062.1 Primary Assembly 7559 na Ga0196855_163 unplaced-scaffold na na QBKN01000063.1 = NZ_QBKN01000063.1 Primary Assembly 6982 na Ga0196855_164 unplaced-scaffold na na QBKN01000064.1 = NZ_QBKN01000064.1 Primary Assembly 6948 na Ga0196855_165 unplaced-scaffold na na QBKN01000065.1 = NZ_QBKN01000065.1 Primary Assembly 5802 na Ga0196855_166 unplaced-scaffold na na QBKN01000066.1 = NZ_QBKN01000066.1 Primary Assembly 4387 na Ga0196855_167 unplaced-scaffold na na QBKN01000067.1 = NZ_QBKN01000067.1 Primary Assembly 4206 na Ga0196855_168 unplaced-scaffold na na QBKN01000068.1 = NZ_QBKN01000068.1 Primary Assembly 4161 na Ga0196855_169 unplaced-scaffold na na QBKN01000069.1 = NZ_QBKN01000069.1 Primary Assembly 3859 na Ga0196855_170 unplaced-scaffold na na QBKN01000070.1 = NZ_QBKN01000070.1 Primary Assembly 3783 na Ga0196855_171 unplaced-scaffold na na QBKN01000071.1 = NZ_QBKN01000071.1 Primary Assembly 3690 na Ga0196855_172 unplaced-scaffold na na QBKN01000072.1 = NZ_QBKN01000072.1 Primary Assembly 3483 na Ga0196855_173 unplaced-scaffold na na QBKN01000073.1 = NZ_QBKN01000073.1 Primary Assembly 3392 na Ga0196855_174 unplaced-scaffold na na QBKN01000074.1 = NZ_QBKN01000074.1 Primary Assembly 2919 na Ga0196855_175 unplaced-scaffold na na QBKN01000075.1 = NZ_QBKN01000075.1 Primary Assembly 2834 na Ga0196855_176 unplaced-scaffold na na QBKN01000076.1 = NZ_QBKN01000076.1 Primary Assembly 2655 na Ga0196855_177 unplaced-scaffold na na QBKN01000077.1 = NZ_QBKN01000077.1 Primary Assembly 2497 na Ga0196855_178 unplaced-scaffold na na QBKN01000078.1 = NZ_QBKN01000078.1 Primary Assembly 2483 na Ga0196855_179 unplaced-scaffold na na QBKN01000079.1 = NZ_QBKN01000079.1 Primary Assembly 2479 na Ga0196855_180 unplaced-scaffold na na QBKN01000080.1 = NZ_QBKN01000080.1 Primary Assembly 2219 na Ga0196855_181 unplaced-scaffold na na QBKN01000081.1 = NZ_QBKN01000081.1 Primary Assembly 2096 na Ga0196855_182 unplaced-scaffold na na QBKN01000082.1 = NZ_QBKN01000082.1 Primary Assembly 1965 na Ga0196855_183 unplaced-scaffold na na QBKN01000083.1 = NZ_QBKN01000083.1 Primary Assembly 1909 na Ga0196855_184 unplaced-scaffold na na QBKN01000084.1 = NZ_QBKN01000084.1 Primary Assembly 1798 na Ga0196855_185 unplaced-scaffold na na QBKN01000085.1 = NZ_QBKN01000085.1 Primary Assembly 1778 na Ga0196855_186 unplaced-scaffold na na QBKN01000086.1 = NZ_QBKN01000086.1 Primary Assembly 1630 na Ga0196855_187 unplaced-scaffold na na QBKN01000087.1 = NZ_QBKN01000087.1 Primary Assembly 1422 na Ga0196855_188 unplaced-scaffold na na QBKN01000088.1 = NZ_QBKN01000088.1 Primary Assembly 1416 na Ga0196855_189 unplaced-scaffold na na QBKN01000089.1 = NZ_QBKN01000089.1 Primary Assembly 1401 na Ga0196855_190 unplaced-scaffold na na QBKN01000090.1 = NZ_QBKN01000090.1 Primary Assembly 1383 na Ga0196855_191 unplaced-scaffold na na QBKN01000091.1 = NZ_QBKN01000091.1 Primary Assembly 1363 na Ga0196855_192 unplaced-scaffold na na QBKN01000092.1 = NZ_QBKN01000092.1 Primary Assembly 1251 na Ga0196855_193 unplaced-scaffold na na QBKN01000093.1 = NZ_QBKN01000093.1 Primary Assembly 1220 na Ga0196855_194 unplaced-scaffold na na QBKN01000094.1 = NZ_QBKN01000094.1 Primary Assembly 1203 na Ga0196855_195 unplaced-scaffold na na QBKN01000095.1 = NZ_QBKN01000095.1 Primary Assembly 1180 na Ga0196855_196 unplaced-scaffold na na QBKN01000096.1 = NZ_QBKN01000096.1 Primary Assembly 1140 na Ga0196855_197 unplaced-scaffold na na QBKN01000097.1 = NZ_QBKN01000097.1 Primary Assembly 1046 na Ga0196855_198 unplaced-scaffold na na QBKN01000098.1 = NZ_QBKN01000098.1 Primary Assembly 1029 na