# Assembly name: ASM320611v1 # Organism name: Salinicola socius (g-proteobacteria) # Infraspecific name: strain=DSM 19940 # Taxid: 404433 # BioSample: SAMN06299129 # BioProject: PRJNA371426 # Submitter: Universidade de Aveiro # Date: 2018-06-11 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: PZJS01 # Assembly method: CLC Genomics v. 9.5.3 # Expected final version: yes # Genome coverage: 330x # Sequencing technology: Illumina HiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_003206115.1 # RefSeq assembly accession: GCF_003206115.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_003206125.1 GCF_003206125.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Salinicola-socius_contig_1 unplaced-scaffold na na PZJS01000001.1 = NZ_PZJS01000001.1 Primary Assembly 482332 na Salinicola-socius_contig_2 unplaced-scaffold na na PZJS01000002.1 = NZ_PZJS01000002.1 Primary Assembly 285137 na Salinicola-socius_contig_3 unplaced-scaffold na na PZJS01000003.1 = NZ_PZJS01000003.1 Primary Assembly 646397 na Salinicola-socius_contig_4 unplaced-scaffold na na PZJS01000004.1 = NZ_PZJS01000004.1 Primary Assembly 102527 na Salinicola-socius_contig_5 unplaced-scaffold na na PZJS01000005.1 = NZ_PZJS01000005.1 Primary Assembly 197736 na Salinicola-socius_contig_6 unplaced-scaffold na na PZJS01000006.1 = NZ_PZJS01000006.1 Primary Assembly 256610 na Salinicola-socius_contig_7 unplaced-scaffold na na PZJS01000007.1 = NZ_PZJS01000007.1 Primary Assembly 88492 na Salinicola-socius_contig_8 unplaced-scaffold na na PZJS01000008.1 = NZ_PZJS01000008.1 Primary Assembly 1220288 na Salinicola-socius_contig_9 unplaced-scaffold na na PZJS01000009.1 = NZ_PZJS01000009.1 Primary Assembly 165227 na Salinicola-socius_contig_10 unplaced-scaffold na na PZJS01000010.1 = NZ_PZJS01000010.1 Primary Assembly 524 na Salinicola-socius_contig_11 unplaced-scaffold na na PZJS01000011.1 = NZ_PZJS01000011.1 Primary Assembly 2482 na Salinicola-socius_contig_12 unplaced-scaffold na na PZJS01000012.1 = NZ_PZJS01000012.1 Primary Assembly 1920 na Salinicola-socius_contig_13 unplaced-scaffold na na PZJS01000013.1 = NZ_PZJS01000013.1 Primary Assembly 1745 na Salinicola-socius_contig_14 unplaced-scaffold na na PZJS01000014.1 = NZ_PZJS01000014.1 Primary Assembly 1499 na Salinicola-socius_contig_15 unplaced-scaffold na na PZJS01000015.1 = NZ_PZJS01000015.1 Primary Assembly 183363 na Salinicola-socius_contig_16 unplaced-scaffold na na PZJS01000016.1 = NZ_PZJS01000016.1 Primary Assembly 134448 na Salinicola-socius_contig_17 unplaced-scaffold na na PZJS01000017.1 = NZ_PZJS01000017.1 Primary Assembly 68681 na Salinicola-socius_contig_18 unplaced-scaffold na na PZJS01000018.1 = NZ_PZJS01000018.1 Primary Assembly 77430 na Salinicola-socius_contig_19 unplaced-scaffold na na PZJS01000019.1 = NZ_PZJS01000019.1 Primary Assembly 5788 na Salinicola-socius_contig_20 unplaced-scaffold na na PZJS01000020.1 = NZ_PZJS01000020.1 Primary Assembly 102895 na Salinicola-socius_contig_21 unplaced-scaffold na na PZJS01000021.1 = NZ_PZJS01000021.1 Primary Assembly 24308 na Salinicola-socius_contig_22 unplaced-scaffold na na PZJS01000022.1 = NZ_PZJS01000022.1 Primary Assembly 14080 na Salinicola-socius_contig_23 unplaced-scaffold na na PZJS01000023.1 = NZ_PZJS01000023.1 Primary Assembly 598 na Salinicola-socius_contig_24 unplaced-scaffold na na PZJS01000024.1 = NZ_PZJS01000024.1 Primary Assembly 5713 na Salinicola-socius_contig_26 unplaced-scaffold na na PZJS01000025.1 = NZ_PZJS01000025.1 Primary Assembly 1880 na Salinicola-socius_contig_27 unplaced-scaffold na na PZJS01000026.1 = NZ_PZJS01000026.1 Primary Assembly 525 na Salinicola-socius_contig_28 unplaced-scaffold na na PZJS01000027.1 = NZ_PZJS01000027.1 Primary Assembly 587 na Salinicola-socius_contig_29 unplaced-scaffold na na PZJS01000028.1 = NZ_PZJS01000028.1 Primary Assembly 5371 na Salinicola-socius_contig_30 unplaced-scaffold na na PZJS01000029.1 = NZ_PZJS01000029.1 Primary Assembly 3321 na Salinicola-socius_contig_31 unplaced-scaffold na na PZJS01000030.1 = NZ_PZJS01000030.1 Primary Assembly 506 na Salinicola-socius_contig_32 unplaced-scaffold na na PZJS01000031.1 = NZ_PZJS01000031.1 Primary Assembly 2839 na Salinicola-socius_contig_33 unplaced-scaffold na na PZJS01000032.1 = NZ_PZJS01000032.1 Primary Assembly 2199 na Salinicola-socius_contig_34 unplaced-scaffold na na PZJS01000033.1 = NZ_PZJS01000033.1 Primary Assembly 2147 na Salinicola-socius_contig_35 unplaced-scaffold na na PZJS01000034.1 = NZ_PZJS01000034.1 Primary Assembly 775 na