# Assembly name: ASM328735v1 # Organism name: Halorubrum sp. 48-1-W (euryarchaeotes) # Infraspecific name: strain=48-1-W # Taxid: 2249761 # BioSample: SAMN09489299 # BioProject: PRJNA478008 # Submitter: THE INSTITUTE OF CYTOLOGY AND GENETICS # Date: 2018-07-03 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: QMIM01 # Assembly method: SPAdes v. 3.10.1 # Expected final version: yes # Genome coverage: 9.0x # Sequencing technology: Illumina MiSeq # GenBank assembly accession: GCA_003287355.1 # RefSeq assembly accession: GCF_003287355.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_003287365.1 GCF_003287365.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name NODE_1_length_345131_cov_9.97315 unplaced-scaffold na na QMIM01000001.1 = NZ_QMIM01000001.1 Primary Assembly 345131 na NODE_2_1_length_216611_cov_10.9555 unplaced-scaffold na na QMIM01000002.1 = NZ_QMIM01000002.1 Primary Assembly 12052 na NODE_2_2_length_216611_cov_10.9555 unplaced-scaffold na na QMIM01000003.1 = NZ_QMIM01000003.1 Primary Assembly 204459 na NODE_3_1_length_196603_cov_9.79781 unplaced-scaffold na na QMIM01000004.1 = NZ_QMIM01000004.1 Primary Assembly 139154 na NODE_3_2_length_196603_cov_9.79781 unplaced-scaffold na na QMIM01000005.1 = NZ_QMIM01000005.1 Primary Assembly 55515 na NODE_3_3_length_196603_cov_9.79781 unplaced-scaffold na na QMIM01000006.1 = NZ_QMIM01000006.1 Primary Assembly 1734 na NODE_4_1_length_187489_cov_9.73474 unplaced-scaffold na na QMIM01000007.1 = NZ_QMIM01000007.1 Primary Assembly 72995 na NODE_4_2_length_187489_cov_9.73474 unplaced-scaffold na na QMIM01000008.1 = NZ_QMIM01000008.1 Primary Assembly 67507 na NODE_4_3_length_187489_cov_9.73474 unplaced-scaffold na na QMIM01000009.1 = NZ_QMIM01000009.1 Primary Assembly 46787 na NODE_5_length_173635_cov_9.67257 unplaced-scaffold na na QMIM01000010.1 = NZ_QMIM01000010.1 Primary Assembly 173635 na NODE_6_length_144750_cov_9.96925 unplaced-scaffold na na QMIM01000011.1 = NZ_QMIM01000011.1 Primary Assembly 144750 na NODE_7_length_144417_cov_9.9449 unplaced-scaffold na na QMIM01000012.1 = NZ_QMIM01000012.1 Primary Assembly 144417 na NODE_8_1_length_128008_cov_9.77985 unplaced-scaffold na na QMIM01000013.1 = NZ_QMIM01000013.1 Primary Assembly 73291 na NODE_8_2_length_128008_cov_9.77985 unplaced-scaffold na na QMIM01000014.1 = NZ_QMIM01000014.1 Primary Assembly 54617 na NODE_9_length_125363_cov_9.70462 unplaced-scaffold na na QMIM01000015.1 = NZ_QMIM01000015.1 Primary Assembly 125363 na NODE_10_length_114400_cov_9.43661 unplaced-scaffold na na QMIM01000016.1 = NZ_QMIM01000016.1 Primary Assembly 114400 na NODE_11_length_100877_cov_10.0532 unplaced-scaffold na na QMIM01000017.1 = NZ_QMIM01000017.1 Primary Assembly 100877 na NODE_12_length_100623_cov_9.54141 unplaced-scaffold na na QMIM01000018.1 = NZ_QMIM01000018.1 Primary Assembly 100623 na NODE_13_length_91530_cov_8.94002 unplaced-scaffold na na QMIM01000019.1 = NZ_QMIM01000019.1 Primary Assembly 91530 na NODE_14_length_88927_cov_9.19518 unplaced-scaffold na na QMIM01000020.1 = NZ_QMIM01000020.1 Primary Assembly 88927 na NODE_15_length_88082_cov_9.71531 unplaced-scaffold na na QMIM01000021.1 = NZ_QMIM01000021.1 Primary Assembly 88082 na NODE_16_length_80902_cov_9.86926 unplaced-scaffold na na QMIM01000022.1 = NZ_QMIM01000022.1 Primary Assembly 80902 na NODE_17_length_78468_cov_10.0102 unplaced-scaffold na na QMIM01000023.1 = NZ_QMIM01000023.1 Primary Assembly 78468 na NODE_18_length_75344_cov_10.007 unplaced-scaffold na na QMIM01000024.1 = NZ_QMIM01000024.1 Primary Assembly 75344 na NODE_19_length_73804_cov_9.90449 unplaced-scaffold na na QMIM01000025.1 = NZ_QMIM01000025.1 Primary Assembly 73804 na NODE_20_1_length_66617_cov_9.26275 unplaced-scaffold na na QMIM01000026.1 = NZ_QMIM01000026.1 Primary Assembly 21198 na NODE_20_2_length_66617_cov_9.26275 unplaced-scaffold na na QMIM01000027.1 = NZ_QMIM01000027.1 Primary Assembly 45319 na NODE_21_length_60088_cov_9.92994 unplaced-scaffold na na QMIM01000028.1 = NZ_QMIM01000028.1 Primary Assembly 60088 na NODE_22_length_59540_cov_9.43722 unplaced-scaffold na na QMIM01000029.1 = NZ_QMIM01000029.1 Primary Assembly 59540 na NODE_23_length_56943_cov_10.7386 unplaced-scaffold na na QMIM01000030.1 = NZ_QMIM01000030.1 Primary Assembly 56943 na NODE_24_length_55765_cov_9.15617 unplaced-scaffold na na QMIM01000031.1 = NZ_QMIM01000031.1 Primary Assembly 55765 na NODE_25_length_54767_cov_9.91146 unplaced-scaffold na na QMIM01000032.1 = NZ_QMIM01000032.1 Primary Assembly 54767 na NODE_26_length_51800_cov_9.4511 unplaced-scaffold na na QMIM01000033.1 = NZ_QMIM01000033.1 Primary Assembly 51800 na NODE_27_length_50433_cov_9.92544 unplaced-scaffold na na QMIM01000034.1 = NZ_QMIM01000034.1 Primary Assembly 50433 na NODE_28_length_49467_cov_10.4194 unplaced-scaffold na na QMIM01000035.1 = NZ_QMIM01000035.1 Primary Assembly 49467 na NODE_29_length_48094_cov_9.52341 unplaced-scaffold na na QMIM01000036.1 = NZ_QMIM01000036.1 Primary Assembly 48094 na NODE_30_length_46718_cov_10.2689 unplaced-scaffold na na QMIM01000037.1 = NZ_QMIM01000037.1 Primary Assembly 46718 na NODE_31_length_42395_cov_10.3481 unplaced-scaffold na na QMIM01000038.1 = NZ_QMIM01000038.1 Primary Assembly 42395 na NODE_32_length_40606_cov_10.0265 unplaced-scaffold na na QMIM01000039.1 = NZ_QMIM01000039.1 Primary Assembly 40606 na NODE_33_length_40246_cov_10.0393 unplaced-scaffold na na QMIM01000040.1 = NZ_QMIM01000040.1 Primary Assembly 26915 na NODE_33_2_length_40246_cov_10.0393 unplaced-scaffold na na QMIM01000041.1 = NZ_QMIM01000041.1 Primary Assembly 13231 na NODE_34_length_31532_cov_9.82352 unplaced-scaffold na na QMIM01000042.1 = NZ_QMIM01000042.1 Primary Assembly 31532 na NODE_35_length_29005_cov_46.7724 unplaced-scaffold na na QMIM01000043.1 = NZ_QMIM01000043.1 Primary Assembly 29005 na NODE_36_length_28237_cov_7.94213 unplaced-scaffold na na QMIM01000044.1 = NZ_QMIM01000044.1 Primary Assembly 28237 na NODE_37_length_24600_cov_11.9499 unplaced-scaffold na na QMIM01000045.1 = NZ_QMIM01000045.1 Primary Assembly 24600 na NODE_38_length_20036_cov_9.82153 unplaced-scaffold na na QMIM01000046.1 = NZ_QMIM01000046.1 Primary Assembly 20036 na NODE_39_length_18689_cov_10.1706 unplaced-scaffold na na QMIM01000047.1 = NZ_QMIM01000047.1 Primary Assembly 18689 na NODE_40_length_18237_cov_9.66549 unplaced-scaffold na na QMIM01000048.1 = NZ_QMIM01000048.1 Primary Assembly 18237 na NODE_41_length_16650_cov_9.29009 unplaced-scaffold na na QMIM01000049.1 = NZ_QMIM01000049.1 Primary Assembly 16650 na NODE_42_length_15685_cov_8.85176 unplaced-scaffold na na QMIM01000050.1 = NZ_QMIM01000050.1 Primary Assembly 15685 na NODE_43_length_15447_cov_9.47096 unplaced-scaffold na na QMIM01000051.1 = NZ_QMIM01000051.1 Primary Assembly 15447 na NODE_44_length_11673_cov_7.32562 unplaced-scaffold na na QMIM01000052.1 = NZ_QMIM01000052.1 Primary Assembly 11673 na NODE_45_length_11377_cov_9.31099 unplaced-scaffold na na QMIM01000053.1 = NZ_QMIM01000053.1 Primary Assembly 11377 na NODE_46_length_10591_cov_6.60535 unplaced-scaffold na na QMIM01000054.1 = NZ_QMIM01000054.1 Primary Assembly 10591 na NODE_47_length_9673_cov_8.70202 unplaced-scaffold na na QMIM01000055.1 = NZ_QMIM01000055.1 Primary Assembly 9673 na NODE_48_length_9126_cov_10.6374 unplaced-scaffold na na QMIM01000056.1 = NZ_QMIM01000056.1 Primary Assembly 9126 na NODE_49_length_7907_cov_7.00637 unplaced-scaffold na na QMIM01000057.1 = NZ_QMIM01000057.1 Primary Assembly 7907 na NODE_50_length_7213_cov_359.528 unplaced-scaffold na na QMIM01000058.1 = NZ_QMIM01000058.1 Primary Assembly 7213 na NODE_51_length_5664_cov_15.3366 unplaced-scaffold na na QMIM01000059.1 = NZ_QMIM01000059.1 Primary Assembly 5664 na NODE_53_length_4447_cov_9.31808 unplaced-scaffold na na QMIM01000060.1 = NZ_QMIM01000060.1 Primary Assembly 4447 na NODE_54_length_1442_cov_13.9986 unplaced-scaffold na na QMIM01000061.1 = NZ_QMIM01000061.1 Primary Assembly 1442 na NODE_56_length_1400_cov_34.7257 unplaced-scaffold na na QMIM01000062.1 = NZ_QMIM01000062.1 Primary Assembly 1400 na NODE_57_length_1390_cov_35.0757 unplaced-scaffold na na QMIM01000063.1 = NZ_QMIM01000063.1 Primary Assembly 1390 na NODE_58_length_1328_cov_21.4808 unplaced-scaffold na na QMIM01000064.1 = NZ_QMIM01000064.1 Primary Assembly 1328 na NODE_59_length_1327_cov_18.2351 unplaced-scaffold na na QMIM01000065.1 = NZ_QMIM01000065.1 Primary Assembly 1327 na NODE_60_length_1169_cov_16.7487 unplaced-scaffold na na QMIM01000066.1 = NZ_QMIM01000066.1 Primary Assembly 1169 na NODE_61_length_1165_cov_16.0486 unplaced-scaffold na na QMIM01000067.1 = NZ_QMIM01000067.1 Primary Assembly 1165 na NODE_62_length_1163_cov_19.1345 unplaced-scaffold na na QMIM01000068.1 = NZ_QMIM01000068.1 Primary Assembly 1163 na NODE_63_length_1113_cov_15.1333 unplaced-scaffold na na QMIM01000069.1 = NZ_QMIM01000069.1 Primary Assembly 1113 na