# Assembly name: ASM331561v1 # Organism name: Bifidobacterium xylocopae (high G+C Gram-positive bacteria) # Infraspecific name: strain=XV2 # Taxid: 2493119 # BioSample: SAMN07723028 # BioProject: PRJNA412690 # Submitter: University of Bologna # Date: 2018-07-12 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: PDCH01 # Assembly method: SPAdes v. 3.7 # Expected final version: no # Genome coverage: 350x # Sequencing technology: Illumina MiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_003315615.1 # RefSeq assembly accession: GCF_003315615.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_003315625.1 GCF_003315625.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name ctg_1 unplaced-scaffold na na PDCH01000001.1 = NZ_PDCH01000001.1 Primary Assembly 299711 na ctg_2 unplaced-scaffold na na PDCH01000002.1 = NZ_PDCH01000002.1 Primary Assembly 219084 na ctg_3 unplaced-scaffold na na PDCH01000003.1 = NZ_PDCH01000003.1 Primary Assembly 190541 na ctg_4 unplaced-scaffold na na PDCH01000004.1 = NZ_PDCH01000004.1 Primary Assembly 109948 na ctg_5 unplaced-scaffold na na PDCH01000005.1 = NZ_PDCH01000005.1 Primary Assembly 107064 na ctg_6 unplaced-scaffold na na PDCH01000006.1 = NZ_PDCH01000006.1 Primary Assembly 104933 na ctg_7 unplaced-scaffold na na PDCH01000007.1 = NZ_PDCH01000007.1 Primary Assembly 97526 na ctg_8 unplaced-scaffold na na PDCH01000008.1 = NZ_PDCH01000008.1 Primary Assembly 84203 na ctg_9 unplaced-scaffold na na PDCH01000009.1 = NZ_PDCH01000009.1 Primary Assembly 83824 na ctg_10 unplaced-scaffold na na PDCH01000010.1 = NZ_PDCH01000010.1 Primary Assembly 65911 na ctg_11 unplaced-scaffold na na PDCH01000011.1 = NZ_PDCH01000011.1 Primary Assembly 64589 na ctg_12 unplaced-scaffold na na PDCH01000012.1 = NZ_PDCH01000012.1 Primary Assembly 60808 na ctg_13 unplaced-scaffold na na PDCH01000013.1 = NZ_PDCH01000013.1 Primary Assembly 43696 na ctg_14 unplaced-scaffold na na PDCH01000014.1 = NZ_PDCH01000014.1 Primary Assembly 39519 na ctg_15 unplaced-scaffold na na PDCH01000015.1 = NZ_PDCH01000015.1 Primary Assembly 37686 na ctg_16 unplaced-scaffold na na PDCH01000016.1 = NZ_PDCH01000016.1 Primary Assembly 35849 na ctg_17 unplaced-scaffold na na PDCH01000017.1 = NZ_PDCH01000017.1 Primary Assembly 30180 na ctg_18 unplaced-scaffold na na PDCH01000018.1 = NZ_PDCH01000018.1 Primary Assembly 25448 na ctg_19 unplaced-scaffold na na PDCH01000019.1 = NZ_PDCH01000019.1 Primary Assembly 22072 na ctg_20 unplaced-scaffold na na PDCH01000020.1 = NZ_PDCH01000020.1 Primary Assembly 17936 na ctg_21 unplaced-scaffold na na PDCH01000021.1 = NZ_PDCH01000021.1 Primary Assembly 17778 na ctg_22 unplaced-scaffold na na PDCH01000022.1 = NZ_PDCH01000022.1 Primary Assembly 17144 na ctg_23 unplaced-scaffold na na PDCH01000023.1 = NZ_PDCH01000023.1 Primary Assembly 8556 na ctg_24 unplaced-scaffold na na PDCH01000024.1 = NZ_PDCH01000024.1 Primary Assembly 8396 na ctg_25 unplaced-scaffold na na PDCH01000025.1 = NZ_PDCH01000025.1 Primary Assembly 6178 na ctg_26 unplaced-scaffold na na PDCH01000026.1 = NZ_PDCH01000026.1 Primary Assembly 3494 na ctg_27 unplaced-scaffold na na PDCH01000027.1 = NZ_PDCH01000027.1 Primary Assembly 3207 na ctg_28 unplaced-scaffold na na PDCH01000028.1 = NZ_PDCH01000028.1 Primary Assembly 2395 na ctg_29 unplaced-scaffold na na PDCH01000029.1 = NZ_PDCH01000029.1 Primary Assembly 2394 na ctg_30 unplaced-scaffold na na PDCH01000030.1 = NZ_PDCH01000030.1 Primary Assembly 2248 na ctg_31 unplaced-scaffold na na PDCH01000031.1 = NZ_PDCH01000031.1 Primary Assembly 1951 na ctg_32 unplaced-scaffold na na PDCH01000032.1 = NZ_PDCH01000032.1 Primary Assembly 1343 na ctg_33 unplaced-scaffold na na PDCH01000033.1 = NZ_PDCH01000033.1 Primary Assembly 1465 na ctg_34 unplaced-scaffold na na PDCH01000034.1 = NZ_PDCH01000034.1 Primary Assembly 913 na ctg_35 unplaced-scaffold na na PDCH01000035.1 = NZ_PDCH01000035.1 Primary Assembly 870 na ctg_36 unplaced-scaffold na na PDCH01000036.1 = NZ_PDCH01000036.1 Primary Assembly 762 na ctg_37 unplaced-scaffold na na PDCH01000037.1 = NZ_PDCH01000037.1 Primary Assembly 560 na ctg_38 unplaced-scaffold na na PDCH01000038.1 = NZ_PDCH01000038.1 Primary Assembly 698 na ctg_39 unplaced-scaffold na na PDCH01000039.1 = NZ_PDCH01000039.1 Primary Assembly 629 na ctg_40 unplaced-scaffold na na PDCH01000040.1 = NZ_PDCH01000040.1 Primary Assembly 603 na ctg_41 unplaced-scaffold na na PDCH01000041.1 = NZ_PDCH01000041.1 Primary Assembly 558 na ctg_42 unplaced-scaffold na na PDCH01000042.1 = NZ_PDCH01000042.1 Primary Assembly 534 na ctg_43 unplaced-scaffold na na PDCH01000043.1 = NZ_PDCH01000043.1 Primary Assembly 518 na ctg_44 unplaced-scaffold na na PDCH01000044.1 = NZ_PDCH01000044.1 Primary Assembly 512 na ctg_45 unplaced-scaffold na na PDCH01000045.1 = NZ_PDCH01000045.1 Primary Assembly 507 na ctg_46 unplaced-scaffold na na PDCH01000046.1 = NZ_PDCH01000046.1 Primary Assembly 499 na ctg_47 unplaced-scaffold na na PDCH01000047.1 = NZ_PDCH01000047.1 Primary Assembly 495 na ctg_48 unplaced-scaffold na na PDCH01000048.1 = NZ_PDCH01000048.1 Primary Assembly 481 na ctg_49 unplaced-scaffold na na PDCH01000049.1 = NZ_PDCH01000049.1 Primary Assembly 479 na ctg_50 unplaced-scaffold na na PDCH01000050.1 = NZ_PDCH01000050.1 Primary Assembly 480 na ctg_51 unplaced-scaffold na na PDCH01000051.1 = NZ_PDCH01000051.1 Primary Assembly 475 na ctg_52 unplaced-scaffold na na PDCH01000052.1 = NZ_PDCH01000052.1 Primary Assembly 473 na ctg_53 unplaced-scaffold na na PDCH01000053.1 = NZ_PDCH01000053.1 Primary Assembly 471 na ctg_54 unplaced-scaffold na na PDCH01000054.1 = NZ_PDCH01000054.1 Primary Assembly 469 na ctg_55 unplaced-scaffold na na PDCH01000055.1 = NZ_PDCH01000055.1 Primary Assembly 463 na ctg_56 unplaced-scaffold na na PDCH01000056.1 = NZ_PDCH01000056.1 Primary Assembly 462 na ctg_57 unplaced-scaffold na na PDCH01000057.1 = NZ_PDCH01000057.1 Primary Assembly 459 na ctg_58 unplaced-scaffold na na PDCH01000058.1 = NZ_PDCH01000058.1 Primary Assembly 459 na ctg_59 unplaced-scaffold na na PDCH01000059.1 = NZ_PDCH01000059.1 Primary Assembly 459 na ctg_60 unplaced-scaffold na na PDCH01000060.1 = NZ_PDCH01000060.1 Primary Assembly 454 na ctg_61 unplaced-scaffold na na PDCH01000061.1 = NZ_PDCH01000061.1 Primary Assembly 453 na ctg_62 unplaced-scaffold na na PDCH01000062.1 = NZ_PDCH01000062.1 Primary Assembly 453 na ctg_63 unplaced-scaffold na na PDCH01000063.1 = NZ_PDCH01000063.1 Primary Assembly 451 na ctg_64 unplaced-scaffold na na PDCH01000064.1 = NZ_PDCH01000064.1 Primary Assembly 450 na ctg_65 unplaced-scaffold na na PDCH01000065.1 = NZ_PDCH01000065.1 Primary Assembly 448 na ctg_66 unplaced-scaffold na na PDCH01000066.1 = NZ_PDCH01000066.1 Primary Assembly 448 na ctg_67 unplaced-scaffold na na PDCH01000067.1 = NZ_PDCH01000067.1 Primary Assembly 447 na ctg_68 unplaced-scaffold na na PDCH01000068.1 = NZ_PDCH01000068.1 Primary Assembly 446 na ctg_69 unplaced-scaffold na na PDCH01000069.1 = NZ_PDCH01000069.1 Primary Assembly 445 na ctg_70 unplaced-scaffold na na PDCH01000070.1 = NZ_PDCH01000070.1 Primary Assembly 444 na ctg_71 unplaced-scaffold na na PDCH01000071.1 = NZ_PDCH01000071.1 Primary Assembly 444 na ctg_72 unplaced-scaffold na na PDCH01000072.1 = NZ_PDCH01000072.1 Primary Assembly 443 na ctg_73 unplaced-scaffold na na PDCH01000073.1 = NZ_PDCH01000073.1 Primary Assembly 443 na ctg_74 unplaced-scaffold na na PDCH01000074.1 = NZ_PDCH01000074.1 Primary Assembly 442 na ctg_75 unplaced-scaffold na na PDCH01000075.1 = NZ_PDCH01000075.1 Primary Assembly 442 na ctg_76 unplaced-scaffold na na PDCH01000076.1 = NZ_PDCH01000076.1 Primary Assembly 440 na ctg_77 unplaced-scaffold na na PDCH01000077.1 = NZ_PDCH01000077.1 Primary Assembly 440 na ctg_78 unplaced-scaffold na na PDCH01000078.1 = NZ_PDCH01000078.1 Primary Assembly 440 na ctg_79 unplaced-scaffold na na PDCH01000079.1 = NZ_PDCH01000079.1 Primary Assembly 439 na ctg_80 unplaced-scaffold na na PDCH01000080.1 = NZ_PDCH01000080.1 Primary Assembly 439 na ctg_81 unplaced-scaffold na na PDCH01000081.1 = NZ_PDCH01000081.1 Primary Assembly 439 na ctg_82 unplaced-scaffold na na PDCH01000082.1 = NZ_PDCH01000082.1 Primary Assembly 438 na ctg_83 unplaced-scaffold na na PDCH01000083.1 = NZ_PDCH01000083.1 Primary Assembly 438 na ctg_84 unplaced-scaffold na na PDCH01000084.1 = NZ_PDCH01000084.1 Primary Assembly 438 na ctg_85 unplaced-scaffold na na PDCH01000085.1 = NZ_PDCH01000085.1 Primary Assembly 437 na ctg_86 unplaced-scaffold na na PDCH01000086.1 = NZ_PDCH01000086.1 Primary Assembly 437 na ctg_87 unplaced-scaffold na na PDCH01000087.1 = NZ_PDCH01000087.1 Primary Assembly 436 na ctg_88 unplaced-scaffold na na PDCH01000088.1 = NZ_PDCH01000088.1 Primary Assembly 435 na ctg_89 unplaced-scaffold na na PDCH01000089.1 = NZ_PDCH01000089.1 Primary Assembly 434 na ctg_90 unplaced-scaffold na na PDCH01000090.1 = NZ_PDCH01000090.1 Primary Assembly 434 na ctg_91 unplaced-scaffold na na PDCH01000091.1 = NZ_PDCH01000091.1 Primary Assembly 433 na ctg_92 unplaced-scaffold na na PDCH01000092.1 = NZ_PDCH01000092.1 Primary Assembly 432 na ctg_93 unplaced-scaffold na na PDCH01000093.1 = NZ_PDCH01000093.1 Primary Assembly 432 na ctg_94 unplaced-scaffold na na PDCH01000094.1 = NZ_PDCH01000094.1 Primary Assembly 432 na ctg_95 unplaced-scaffold na na PDCH01000095.1 = NZ_PDCH01000095.1 Primary Assembly 432 na ctg_96 unplaced-scaffold na na PDCH01000096.1 = NZ_PDCH01000096.1 Primary Assembly 430 na ctg_97 unplaced-scaffold na na PDCH01000097.1 = NZ_PDCH01000097.1 Primary Assembly 429 na ctg_98 unplaced-scaffold na na PDCH01000098.1 = NZ_PDCH01000098.1 Primary Assembly 359 na