# Assembly name: ASM334055v1 # Organism name: Jannaschia formosa (a-proteobacteria) # Infraspecific name: strain=12N15 # Taxid: 2259592 # BioSample: SAMN09580375 # BioProject: PRJNA478902 # Submitter: Shangdong University # Date: 2018-07-25 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: QPLJ01 # Assembly method: SOAPdenovo v. 2.04 # Expected final version: yes # Genome coverage: 100.0x # Sequencing technology: Illumina HiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_003340555.1 # RefSeq assembly accession: GCF_003340555.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_003340575.1 GCF_003340575.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name 12N15_scaffold1 unplaced-scaffold na na QPLJ01000001.1 = NZ_QPLJ01000001.1 Primary Assembly 544876 na 12N15_scaffold2 unplaced-scaffold na na QPLJ01000002.1 = NZ_QPLJ01000002.1 Primary Assembly 304404 na 12N15_scaffold3 unplaced-scaffold na na QPLJ01000003.1 = NZ_QPLJ01000003.1 Primary Assembly 283817 na 12N15_scaffold4 unplaced-scaffold na na QPLJ01000004.1 = NZ_QPLJ01000004.1 Primary Assembly 265976 na 12N15_scaffold5 unplaced-scaffold na na QPLJ01000005.1 = NZ_QPLJ01000005.1 Primary Assembly 236035 na 12N15_scaffold6 unplaced-scaffold na na QPLJ01000006.1 = NZ_QPLJ01000006.1 Primary Assembly 217192 na 12N15_scaffold7 unplaced-scaffold na na QPLJ01000007.1 = NZ_QPLJ01000007.1 Primary Assembly 204860 na 12N15_scaffold8 unplaced-scaffold na na QPLJ01000008.1 = NZ_QPLJ01000008.1 Primary Assembly 172650 na 12N15_scaffold9 unplaced-scaffold na na QPLJ01000009.1 = NZ_QPLJ01000009.1 Primary Assembly 157793 na 12N15_scaffold10 unplaced-scaffold na na QPLJ01000010.1 = NZ_QPLJ01000010.1 Primary Assembly 139603 na 12N15_scaffold11 unplaced-scaffold na na QPLJ01000011.1 = NZ_QPLJ01000011.1 Primary Assembly 138715 na 12N15_scaffold12 unplaced-scaffold na na QPLJ01000012.1 = NZ_QPLJ01000012.1 Primary Assembly 128897 na 12N15_scaffold13 unplaced-scaffold na na QPLJ01000013.1 = NZ_QPLJ01000013.1 Primary Assembly 116748 na 12N15_scaffold14 unplaced-scaffold na na QPLJ01000014.1 = NZ_QPLJ01000014.1 Primary Assembly 109692 na 12N15_scaffold15 unplaced-scaffold na na QPLJ01000015.1 = NZ_QPLJ01000015.1 Primary Assembly 106518 na 12N15_scaffold16 unplaced-scaffold na na QPLJ01000016.1 = NZ_QPLJ01000016.1 Primary Assembly 100473 na 12N15_scaffold17 unplaced-scaffold na na QPLJ01000017.1 = NZ_QPLJ01000017.1 Primary Assembly 90547 na 12N15_scaffold18 unplaced-scaffold na na QPLJ01000018.1 = NZ_QPLJ01000018.1 Primary Assembly 90123 na 12N15_scaffold19 unplaced-scaffold na na QPLJ01000019.1 = NZ_QPLJ01000019.1 Primary Assembly 77572 na 12N15_scaffold20 unplaced-scaffold na na QPLJ01000020.1 = NZ_QPLJ01000020.1 Primary Assembly 72858 na 12N15_scaffold21 unplaced-scaffold na na QPLJ01000021.1 = NZ_QPLJ01000021.1 Primary Assembly 69635 na 12N15_scaffold22 unplaced-scaffold na na QPLJ01000022.1 = NZ_QPLJ01000022.1 Primary Assembly 66415 na 12N15_scaffold23 unplaced-scaffold na na QPLJ01000023.1 = NZ_QPLJ01000023.1 Primary Assembly 59713 na 12N15_scaffold24 unplaced-scaffold na na QPLJ01000024.1 = NZ_QPLJ01000024.1 Primary Assembly 55782 na 12N15_scaffold25 unplaced-scaffold na na QPLJ01000025.1 = NZ_QPLJ01000025.1 Primary Assembly 52633 na 12N15_scaffold26 unplaced-scaffold na na QPLJ01000026.1 = NZ_QPLJ01000026.1 Primary Assembly 49293 na 12N15_scaffold27 unplaced-scaffold na na QPLJ01000027.1 = NZ_QPLJ01000027.1 Primary Assembly 45157 na 12N15_scaffold28 unplaced-scaffold na na QPLJ01000028.1 = NZ_QPLJ01000028.1 Primary Assembly 44540 na 12N15_scaffold29 unplaced-scaffold na na QPLJ01000029.1 = NZ_QPLJ01000029.1 Primary Assembly 43426 na 12N15_scaffold30 unplaced-scaffold na na QPLJ01000030.1 = NZ_QPLJ01000030.1 Primary Assembly 42921 na 12N15_scaffold31 unplaced-scaffold na na QPLJ01000031.1 = NZ_QPLJ01000031.1 Primary Assembly 40124 na 12N15_scaffold32 unplaced-scaffold na na QPLJ01000032.1 = NZ_QPLJ01000032.1 Primary Assembly 37280 na 12N15_scaffold33 unplaced-scaffold na na QPLJ01000033.1 = NZ_QPLJ01000033.1 Primary Assembly 36973 na 12N15_scaffold34 unplaced-scaffold na na QPLJ01000034.1 = NZ_QPLJ01000034.1 Primary Assembly 36345 na 12N15_scaffold35 unplaced-scaffold na na QPLJ01000035.1 = NZ_QPLJ01000035.1 Primary Assembly 33657 na 12N15_scaffold36 unplaced-scaffold na na QPLJ01000036.1 = NZ_QPLJ01000036.1 Primary Assembly 33083 na 12N15_scaffold37 unplaced-scaffold na na QPLJ01000037.1 = NZ_QPLJ01000037.1 Primary Assembly 30084 na 12N15_scaffold38 unplaced-scaffold na na QPLJ01000038.1 = NZ_QPLJ01000038.1 Primary Assembly 29326 na 12N15_scaffold39 unplaced-scaffold na na QPLJ01000039.1 = NZ_QPLJ01000039.1 Primary Assembly 29035 na 12N15_scaffold40 unplaced-scaffold na na QPLJ01000040.1 = NZ_QPLJ01000040.1 Primary Assembly 23326 na 12N15_scaffold41 unplaced-scaffold na na QPLJ01000041.1 = NZ_QPLJ01000041.1 Primary Assembly 22549 na 12N15_scaffold42 unplaced-scaffold na na QPLJ01000042.1 = NZ_QPLJ01000042.1 Primary Assembly 20952 na 12N15_scaffold43 unplaced-scaffold na na QPLJ01000043.1 = NZ_QPLJ01000043.1 Primary Assembly 16310 na 12N15_scaffold44 unplaced-scaffold na na QPLJ01000044.1 = NZ_QPLJ01000044.1 Primary Assembly 14201 na 12N15_scaffold45 unplaced-scaffold na na QPLJ01000045.1 = NZ_QPLJ01000045.1 Primary Assembly 13329 na 12N15_scaffold46 unplaced-scaffold na na QPLJ01000046.1 = NZ_QPLJ01000046.1 Primary Assembly 11195 na 12N15_scaffold47 unplaced-scaffold na na QPLJ01000047.1 = NZ_QPLJ01000047.1 Primary Assembly 11037 na 12N15_scaffold48 unplaced-scaffold na na QPLJ01000048.1 = NZ_QPLJ01000048.1 Primary Assembly 10775 na 12N15_scaffold49 unplaced-scaffold na na QPLJ01000049.1 = NZ_QPLJ01000049.1 Primary Assembly 9076 na 12N15_scaffold50 unplaced-scaffold na na QPLJ01000050.1 = NZ_QPLJ01000050.1 Primary Assembly 8722 na 12N15_scaffold51 unplaced-scaffold na na QPLJ01000051.1 = NZ_QPLJ01000051.1 Primary Assembly 8323 na 12N15_scaffold52 unplaced-scaffold na na QPLJ01000052.1 = NZ_QPLJ01000052.1 Primary Assembly 7629 na 12N15_scaffold53 unplaced-scaffold na na QPLJ01000053.1 = NZ_QPLJ01000053.1 Primary Assembly 7349 na 12N15_scaffold54 unplaced-scaffold na na QPLJ01000054.1 = NZ_QPLJ01000054.1 Primary Assembly 7098 na 12N15_scaffold55 unplaced-scaffold na na QPLJ01000055.1 = NZ_QPLJ01000055.1 Primary Assembly 6966 na 12N15_scaffold56 unplaced-scaffold na na QPLJ01000056.1 = NZ_QPLJ01000056.1 Primary Assembly 6776 na 12N15_scaffold57 unplaced-scaffold na na QPLJ01000057.1 = NZ_QPLJ01000057.1 Primary Assembly 5992 na 12N15_scaffold58 unplaced-scaffold na na QPLJ01000058.1 = NZ_QPLJ01000058.1 Primary Assembly 5434 na 12N15_scaffold59 unplaced-scaffold na na QPLJ01000059.1 = NZ_QPLJ01000059.1 Primary Assembly 5433 na 12N15_scaffold60 unplaced-scaffold na na QPLJ01000060.1 = NZ_QPLJ01000060.1 Primary Assembly 5010 na 12N15_scaffold61 unplaced-scaffold na na QPLJ01000061.1 = NZ_QPLJ01000061.1 Primary Assembly 4981 na 12N15_scaffold62 unplaced-scaffold na na QPLJ01000062.1 = NZ_QPLJ01000062.1 Primary Assembly 4747 na 12N15_scaffold63 unplaced-scaffold na na QPLJ01000063.1 = NZ_QPLJ01000063.1 Primary Assembly 4196 na 12N15_scaffold64 unplaced-scaffold na na QPLJ01000064.1 = NZ_QPLJ01000064.1 Primary Assembly 3944 na 12N15_scaffold65 unplaced-scaffold na na QPLJ01000065.1 = NZ_QPLJ01000065.1 Primary Assembly 3474 na 12N15_scaffold66 unplaced-scaffold na na QPLJ01000066.1 = NZ_QPLJ01000066.1 Primary Assembly 3341 na 12N15_scaffold67 unplaced-scaffold na na QPLJ01000067.1 = NZ_QPLJ01000067.1 Primary Assembly 3221 na 12N15_scaffold68 unplaced-scaffold na na QPLJ01000068.1 = NZ_QPLJ01000068.1 Primary Assembly 3163 na 12N15_scaffold69 unplaced-scaffold na na QPLJ01000069.1 = NZ_QPLJ01000069.1 Primary Assembly 2902 na 12N15_scaffold70 unplaced-scaffold na na QPLJ01000070.1 = NZ_QPLJ01000070.1 Primary Assembly 2832 na 12N15_scaffold71 unplaced-scaffold na na QPLJ01000071.1 = NZ_QPLJ01000071.1 Primary Assembly 2781 na 12N15_scaffold72 unplaced-scaffold na na QPLJ01000072.1 = NZ_QPLJ01000072.1 Primary Assembly 2263 na 12N15_scaffold73 unplaced-scaffold na na QPLJ01000073.1 = NZ_QPLJ01000073.1 Primary Assembly 2085 na 12N15_scaffold74 unplaced-scaffold na na QPLJ01000074.1 = NZ_QPLJ01000074.1 Primary Assembly 2055 na 12N15_scaffold75 unplaced-scaffold na na QPLJ01000075.1 = NZ_QPLJ01000075.1 Primary Assembly 1908 na 12N15_scaffold76 unplaced-scaffold na na QPLJ01000076.1 = NZ_QPLJ01000076.1 Primary Assembly 1843 na 12N15_scaffold77 unplaced-scaffold na na QPLJ01000077.1 = NZ_QPLJ01000077.1 Primary Assembly 1824 na 12N15_scaffold79 unplaced-scaffold na na QPLJ01000078.1 = NZ_QPLJ01000078.1 Primary Assembly 1795 na 12N15_scaffold80 unplaced-scaffold na na QPLJ01000079.1 = NZ_QPLJ01000079.1 Primary Assembly 1752 na 12N15_scaffold81 unplaced-scaffold na na QPLJ01000080.1 = NZ_QPLJ01000080.1 Primary Assembly 1702 na 12N15_scaffold82 unplaced-scaffold na na QPLJ01000081.1 = NZ_QPLJ01000081.1 Primary Assembly 1694 na 12N15_scaffold84 unplaced-scaffold na na QPLJ01000082.1 = NZ_QPLJ01000082.1 Primary Assembly 1672 na 12N15_scaffold87 unplaced-scaffold na na QPLJ01000083.1 = NZ_QPLJ01000083.1 Primary Assembly 1612 na 12N15_scaffold90 unplaced-scaffold na na QPLJ01000084.1 = NZ_QPLJ01000084.1 Primary Assembly 1516 na 12N15_scaffold92 unplaced-scaffold na na QPLJ01000085.1 = NZ_QPLJ01000085.1 Primary Assembly 1465 na 12N15_scaffold93 unplaced-scaffold na na QPLJ01000086.1 = NZ_QPLJ01000086.1 Primary Assembly 1351 na 12N15_scaffold95 unplaced-scaffold na na QPLJ01000087.1 = NZ_QPLJ01000087.1 Primary Assembly 1331 na 12N15_scaffold96 unplaced-scaffold na na QPLJ01000088.1 = NZ_QPLJ01000088.1 Primary Assembly 1321 na 12N15_scaffold97 unplaced-scaffold na na QPLJ01000089.1 = NZ_QPLJ01000089.1 Primary Assembly 1318 na 12N15_scaffold98 unplaced-scaffold na na QPLJ01000090.1 = NZ_QPLJ01000090.1 Primary Assembly 1309 na 12N15_scaffold99 unplaced-scaffold na na QPLJ01000091.1 = NZ_QPLJ01000091.1 Primary Assembly 1254 na 12N15_scaffold100 unplaced-scaffold na na QPLJ01000092.1 = NZ_QPLJ01000092.1 Primary Assembly 1254 na 12N15_scaffold101 unplaced-scaffold na na QPLJ01000093.1 = NZ_QPLJ01000093.1 Primary Assembly 1232 na 12N15_scaffold102 unplaced-scaffold na na QPLJ01000094.1 = NZ_QPLJ01000094.1 Primary Assembly 1198 na 12N15_scaffold103 unplaced-scaffold na na QPLJ01000095.1 = NZ_QPLJ01000095.1 Primary Assembly 1180 na 12N15_scaffold104 unplaced-scaffold na na QPLJ01000096.1 = NZ_QPLJ01000096.1 Primary Assembly 1176 na 12N15_scaffold106 unplaced-scaffold na na QPLJ01000097.1 = NZ_QPLJ01000097.1 Primary Assembly 1123 na 12N15_scaffold107 unplaced-scaffold na na QPLJ01000098.1 = NZ_QPLJ01000098.1 Primary Assembly 1073 na 12N15_scaffold109 unplaced-scaffold na na QPLJ01000099.1 = NZ_QPLJ01000099.1 Primary Assembly 1055 na 12N15_scaffold110 unplaced-scaffold na na QPLJ01000100.1 = NZ_QPLJ01000100.1 Primary Assembly 1048 na 12N15_scaffold113 unplaced-scaffold na na QPLJ01000101.1 = NZ_QPLJ01000101.1 Primary Assembly 1008 na 12N15_scaffold114 unplaced-scaffold na na QPLJ01000102.1 = NZ_QPLJ01000102.1 Primary Assembly 1008 na 12N15_scaffold116 unplaced-scaffold na na QPLJ01000103.1 = NZ_QPLJ01000103.1 Primary Assembly 973 na 12N15_scaffold117 unplaced-scaffold na na QPLJ01000104.1 = NZ_QPLJ01000104.1 Primary Assembly 966 na 12N15_scaffold118 unplaced-scaffold na na QPLJ01000105.1 = NZ_QPLJ01000105.1 Primary Assembly 951 na 12N15_scaffold119 unplaced-scaffold na na QPLJ01000106.1 = NZ_QPLJ01000106.1 Primary Assembly 933 na 12N15_scaffold123 unplaced-scaffold na na QPLJ01000107.1 = NZ_QPLJ01000107.1 Primary Assembly 890 na 12N15_scaffold124 unplaced-scaffold na na QPLJ01000108.1 = NZ_QPLJ01000108.1 Primary Assembly 881 na 12N15_scaffold125 unplaced-scaffold na na QPLJ01000109.1 = NZ_QPLJ01000109.1 Primary Assembly 876 na 12N15_scaffold127 unplaced-scaffold na na QPLJ01000110.1 = NZ_QPLJ01000110.1 Primary Assembly 860 na 12N15_scaffold129 unplaced-scaffold na na QPLJ01000111.1 = NZ_QPLJ01000111.1 Primary Assembly 823 na 12N15_scaffold131 unplaced-scaffold na na QPLJ01000112.1 = NZ_QPLJ01000112.1 Primary Assembly 817 na 12N15_scaffold132 unplaced-scaffold na na QPLJ01000113.1 = NZ_QPLJ01000113.1 Primary Assembly 792 na 12N15_scaffold134 unplaced-scaffold na na QPLJ01000114.1 = NZ_QPLJ01000114.1 Primary Assembly 781 na 12N15_scaffold136 unplaced-scaffold na na QPLJ01000115.1 = NZ_QPLJ01000115.1 Primary Assembly 764 na 12N15_scaffold139 unplaced-scaffold na na QPLJ01000116.1 = NZ_QPLJ01000116.1 Primary Assembly 741 na 12N15_scaffold147 unplaced-scaffold na na QPLJ01000117.1 = NZ_QPLJ01000117.1 Primary Assembly 689 na 12N15_scaffold148 unplaced-scaffold na na QPLJ01000118.1 = NZ_QPLJ01000118.1 Primary Assembly 681 na 12N15_scaffold150 unplaced-scaffold na na QPLJ01000119.1 = NZ_QPLJ01000119.1 Primary Assembly 674 na 12N15_scaffold155 unplaced-scaffold na na QPLJ01000120.1 = NZ_QPLJ01000120.1 Primary Assembly 657 na 12N15_scaffold160 unplaced-scaffold na na QPLJ01000121.1 = NZ_QPLJ01000121.1 Primary Assembly 636 na 12N15_scaffold161 unplaced-scaffold na na QPLJ01000122.1 = NZ_QPLJ01000122.1 Primary Assembly 627 na 12N15_scaffold166 unplaced-scaffold na na QPLJ01000123.1 = NZ_QPLJ01000123.1 Primary Assembly 608 na 12N15_scaffold169 unplaced-scaffold na na QPLJ01000124.1 = NZ_QPLJ01000124.1 Primary Assembly 585 na 12N15_scaffold171 unplaced-scaffold na na QPLJ01000125.1 = NZ_QPLJ01000125.1 Primary Assembly 577 na 12N15_scaffold175 unplaced-scaffold na na QPLJ01000126.1 = NZ_QPLJ01000126.1 Primary Assembly 567 na 12N15_scaffold178 unplaced-scaffold na na QPLJ01000127.1 = NZ_QPLJ01000127.1 Primary Assembly 557 na 12N15_scaffold180 unplaced-scaffold na na QPLJ01000128.1 = NZ_QPLJ01000128.1 Primary Assembly 555 na 12N15_scaffold181 unplaced-scaffold na na QPLJ01000129.1 = NZ_QPLJ01000129.1 Primary Assembly 546 na 12N15_scaffold182 unplaced-scaffold na na QPLJ01000130.1 = NZ_QPLJ01000130.1 Primary Assembly 544 na 12N15_scaffold185 unplaced-scaffold na na QPLJ01000131.1 = NZ_QPLJ01000131.1 Primary Assembly 540 na 12N15_scaffold187 unplaced-scaffold na na QPLJ01000132.1 = NZ_QPLJ01000132.1 Primary Assembly 537 na 12N15_scaffold196 unplaced-scaffold na na QPLJ01000133.1 = NZ_QPLJ01000133.1 Primary Assembly 518 na